KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102446335
Entry
102446335         CDS       T02980                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102446335 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pss03019]
    102446335 (THOC6)
   03041 Spliceosome [BR:pss03041]
    102446335 (THOC6)
Messenger RNA biogenesis [BR:pss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102446335 (THOC6)
Spliceosome [BR:pss03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102446335 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR54 Beta-prop_NOL10_N Beta-prop_DCAF12 WD40_like Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 102446335
NCBI-ProteinID: XP_006116293
Ensembl: ENSPSIG00000005010
UniProt: K7FBG6
LinkDB
Position
Unknown
AA seq 319 aa
MDIQRALELLHMTVFSQSVSPCGKYLAAGNNYGEIAVFSLSAALSSEAKEESKKPVVSFT
AHDGPVYAMVSTERQLLSAGNGEVKAWNWSDIVKKGCKEAWSRRPPYRSSLEVPEINSLQ
LNPKDNSLLLAGGDCSVHAMDLESGTFTHEFRGHSDYVHCLALRDQYQECLSGSEDGTVR
MWDLRTGAQVQVIEVHKYEECSRPQNGKWIRCLATDCDWMVCGGGPALTLWHLRSVTPTT
VFPLPHCQQHVMFYQDLILSAGHSPAINHLQISGELRAQIPCTPRSVHSLCVNQRSPEHK
VAGCSLEGGGRMARGRGAE
NT seq 960 nt   +upstreamnt  +downstreamnt
atggacatccagcgcgccctggagctgctgcacatgactgtcttctcccagagcgtctcg
ccctgcggcaagtacctggctgctggcaacaactatggggagatcgctgtgttcagtctc
tcggcggcgctgagctccgaagccaaggaggagagcaagaagccggtggtgtccttcaca
gcccacgatggcccggtctacgccatggtctccaccgagcggcagctgctgagcgccggc
aatggcgaggtcaaggcctggaactggagtgacattgtcaagaaggggtgcaaggaggcc
tggagccgcagacccccttacaggagcagcctggaggtgcctgagatcaacagcctgcag
ctgaaccccaaggataacagcctccttctggcggggggcgactgctctgtgcacgccatg
gatctggagtccggcaccttcactcacgagttccgggggcacagtgactacgtgcactgc
ctggcgctgcgggaccagtaccaggagtgcctgtcgggcagcgaggacggcaccgtgcgc
atgtgggatctacgcaccggggcacaggtccaggtcattgaagtgcacaaatacgaggaa
tgcagccgcccccagaacgggaagtggatccgttgcctggctacagactgtgattggatg
gtgtgcggggggggcccggcactcaccctctggcacctgcgctccgtgacccccaccacg
gtctttcccctgccccactgccagcagcacgtcatgttctaccaggacctgatcctctcg
gcagggcacagcccggccatcaaccacctgcagatcagcggggagctccgggctcagatc
ccctgcacgccccgctccgtccactcgctctgcgtcaaccagcgctcccccgagcacaag
gtagcgggctgctcacttgaggggggggggcgcatggctcgggggagaggtgcagaatga

DBGET integrated database retrieval system