Pelodiscus sinensis (Chinese soft-shelled turtle): 102446747
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Entry
102446747 CDS
T02980
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X3
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102446747 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pss04091
]
102446747 (FREM1)
Lectins [BR:
pss04091
]
C-Type lectins
Lecticans
102446747 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
WXXGXW
Motif
Other DBs
NCBI-GeneID:
102446747
NCBI-ProteinID:
XP_006117891
Ensembl:
ENSPSIG00000009646
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MKPFEITCLFPLLAVILRCICSSFVSVNLGVKVMKGQSVFLSEDDLQFSIPREKDACKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTETETFTETF
ILQVQLLEPDCNIIKISSSALEVPEFYGLSRVIDKNMLTFDYDKRTNLECTITLASLEML
LPAHGQLVIGEPQQEEPRGDQPHSFFPRSKHRTSQRCRSGNCVPELKMIQNTKMSCEEFL
LMGIRYQHLDPPSPNIDYVPIQLHLTDSRSKILHKTEHAWLPVRIKGAVPNQIPRAAFIS
MFILEVDQFILTSLTTTTLDAEDSETPKSLLVFNITKPPSQGYITHLLDHTKPITSFTWK
DLSEMLIAYQPPNNSHTERRNYEMELEVHDFYFERSLPMTVHISIRTTDTNAPRVSWNTG
LDLLEGQSRPITWQQFQIVDNDNIGGVRLVTIDGLQHGRLTVRGGKGFMFMVSDLKAGVV
RYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLISNIGVELYEGQTVLIQ
GSMLQASDMDSSDDYIFFNITKLPQAGEIMKKPGQTLIGYPVTGFLQRDLFNGLIYYRHL
GGEIFEDSLEFVLCDSHDPPNLSEPQVMIVHIIPVDDQLPKEASGVTRQLVVEETKIAHL
TKKHLHFIDMEAQERELTYIVTTSPFFSSTHSPSDAGKLFMIDSMPKPIKDPAAPALRSF
TQHAVNYMKVAYMPPIQDIGPEPQHVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TNNLKVKEGGLCIITGNHILMSDVDTKQENLHIYLQRQPLHGIVVLDGFPMNEGDRFTCK
DLQTLRVRYQHDGSETLHDDILFAATDGINSLEFVLQVKVLPVNDEPPIMKDGLIPLIQC
PEGEEVVITSEYIYANDADTDDMKLMFMLARQPYHGVVKKAGIIVDRFSQADIVSGVVIY
KHTSGELGLTPCFDTLTLVISDGEAGVDVNDCCYDGLLPPPVPLHDSFPVYDLNISVFPV
DNQPPSIAIGAMFVVDEGFSAVITTNNLFATDPDTAADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGISIASFQLKHLIALHINYVQSRHVRTEPTSDQFMIYVTDGKHHSVETPFYVL
INPTNDEVPEFIARNITVQEGHIQELDSSVINVIDLDVPQDHLMFTIIQQPRHGFLINGV
YGNDIMSYKRFISNHHNHEFPVHDFSMKLLKNGLRLVYMHDDSENLTDGFTLQLSDGKHK
VLRTILVKVIPVNDEKPMLSKKDELEVNMGETRIISSAVLSAEDKDTPRERIYYLFEKIP
EYGQLQLKVGGEWVTLQTEMKCTQEEIDMNLVRYVHTGAMGSRNQDSFTFHLWDGDNRSP
ALDFHITIKDIEKGDIAVFIRPLTVTKGDRGYLTTDVLLAIDGTDKPEELLYVITSPPQY
GQLQYVRYPGVPIASFSQMDVAGQAVCYVHSSKAAAPQDLFRFIISNGLKTKHGTFEIML
ETVDQALPIVSRNKGLRLVEGTMALLSPDVLQLSDPDTSSKNLTFLLAQLPQYGHLYHRG
AVLLQHNFTQQDVDNMDIAYKHGGGDSQIDRFTFVATDRTNAGFLVDGKVQMEPVAFIIQ
VDHLDKTAPKIVHLRCASDVELLKNGKHGIYITARSLKAYDPDTEEDEVIFKILRGPRYG
YLENITTGGFIQEGFSQKDLNSKIIFYVINPSCGVNSDSLDFQVTDPTRNSAAPQTLELR
WSQIEMQQAAYEVCENVGMLSLKITRTGHSIDSAFIAVKVKEVSATLGKDFTVTPSKLIQ
FDPGMSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAILGTRTKTVVKILDSKRGQCSSFR
SSGQNKHNLWGTGTLLPVSSGSSLLSNPSTVHLEEIPPSSSKEMMVHRGDVLQEFNVVNL
SRMRLRAVRNGRIVRPSSVLRNGTDVAFRYQGLVSLRAENDTSSANANKANESIINQGQT
KINMISSRKIEVPQADKAELMSESHASQQDPVLSLPKSCTPDLEGLLHFDEHTQNLFQCD
GISWKLWTSKSKDVSMKKCPSGWSHHGGSCYFLVTDQKATWNTAARACREQYLGSLASVV
TKQHMQWLWDFSGRKPFWIGLNYHVNPGHWEWNGGEPVTFTNWRRRPSHSSKQGKNCVLV
QRRGNWQAKDCRKGNRHNYVCSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagattacctgtttatttccactgctcgctgttatcctgagatgcatc
tgctcctcctttgtcagcgtcaatcttggggtgaaagtgatgaagggccagtctgtcttc
ctgtcagaagatgacctgcaattttccatcccgagagagaaagatgcttgcaaagtggaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccacaggtgtttgac
tgtcatttccttcctaatgaagtcaagtatactcataatggttgtccaattttagatgaa
gacatggtcatgcttcggctatacagatttacagaaactgaaacgttcacagaaacgttc
atccttcaggtgcaattacttgaaccagattgtaatatcatcaaaatcagctccagtgcc
ctggaggtccccgagttttatggcctgtccagggtgattgacaagaatatgcttactttt
gactatgacaagaggacaaacctggagtgcaccatcacactggcctcgttagaaatgctt
ctaccagcccacggtcaacttgtcattggagaacctcagcaagaagagcctcgtggagat
caacctcatagcttcttccccagatccaagcacaggacgagccaaaggtgcaggagtgga
aactgtgttccagaactgaagatgattcagaacaccaaaatgagctgtgaggaatttttg
ctgatgggaattagataccagcatcttgatcctccttcacccaacattgattatgttcct
atccagctgcacctcacagacagcagaagcaaaattctacacaagacagagcatgcctgg
ctccctgtccgaatcaaaggtgctgttcccaaccaaatccccagagctgccttcatatct
atgttcatcctggaggtggaccagtttattctgacctccttgacaacaacaacattggat
gccgaagacagtgaaacacccaaatccctgctagtgttcaacattaccaagccaccctcc
caaggctacatcactcatctgttagaccataccaagcctatcacctcctttacatggaaa
gatctcagtgagatgcttatagcatatcagcctccaaacaacagccacacagagaggagg
aattatgagatggagttagaggttcatgacttttactttgaaaggagtttaccaatgact
gtgcatatctccatcagaaccacagatacaaatgctcctcgggtttcatggaatacaggc
ctggatctcctggaagggcagtcccgaccaatcacatggcaacagtttcaaatagtggac
aatgacaacatcgggggtgttcgcttggtcacaattgatggcttacagcacggacggctg
actgtaagaggagggaaaggattcatgttcatggtctctgaccttaaggctggggttgtt
cgctaccaccatgatgacagtgactctacaaaggattttgtggtatttaggatctttgat
ggccaccacagtattcgccataagtttccaatcaatatcctgcctaaagatgacagcccg
cctttcctcatcagcaacattggagttgaactatatgaagggcagacggttctgatccaa
ggctctatgcttcaagcttctgacatggactccagtgatgactacatattctttaatatt
accaaactaccacaggctggagaaatcatgaagaaaccaggacagacccttataggctat
cctgttactggctttcttcagagagatctgtttaatggactaatttattaccgtcactta
ggaggagaaatatttgaggattcccttgaatttgtcctgtgtgatagccatgaccctccc
aatctctcagagccacaggtgatgatagttcacattattcctgtggatgatcagcttcca
aaagaagcttctggagttacccgtcaactagttgttgaggaaactaagatagctcatcta
actaagaaacatctccatttcatagacatggaagcacaagagagggaactcacctacata
gtaaccacctctccatttttctcttctactcatagcccctccgatgcggggaagttgttt
atgatagacagcatgccaaaaccaatcaaagatcctgctgctccagcattgagatcattc
actcagcatgctgtgaactatatgaaagttgcctatatgccccctattcaggacattggg
cctgagccccaacatgtccagtttattttttcagtcagcaatcagcatggaggcactttg
tacgggatctgctttaatattacaattcttccagtggacaatcaagctcctgaggtattt
acaaacaacttgaaagtaaaagaagggggactgtgcatcattacagggaatcatattctg
atgtcagatgtggacacaaaacaggagaacctccacatttaccttcagaggcaaccgcta
catggaatagtggtactagatggatttcccatgaatgaaggtgacaggttcacctgcaag
gacctgcaaacattaagagtcaggtatcagcacgatggctctgagactctgcatgatgac
atcctctttgcagccacagatggcattaattctttagagtttgtcctacaggtcaaggta
ttacctgtaaatgatgagccacctatcatgaaagatggcctcattcccctaatacaatgt
ccagagggtgaggaagttgtgatcacttcagaatatatttatgccaatgatgcagacact
gatgacatgaaactgatgttcatgctggctcgacagccctaccatggggttgtgaagaaa
gctggtatcattgtggatcgcttctcccaagcggacattgtctctggagtagtgatctac
aagcatactagtggggagcttggcctgaccccttgctttgacaccctaaccttggttatc
tcagatggtgaagctggtgtggatgtgaatgactgctgttatgatggacttcttcctcct
ccagttccacttcatgattcctttccagtatatgaccttaacatcagtgtatttccagtg
gacaaccaaccaccatccattgcaattggtgccatgtttgttgtggatgagggtttctca
gctgtcattaccactaacaatttgtttgctactgaccccgacaccgcagcagatgactta
gagtttgttttggtttctcctccccagttcggttacattgaaaatatattaccttctcct
gggtttgagaagagcaacattggtataagtatagcttcatttcagctgaaacacctgata
gccttgcatatcaattatgtgcagtccaggcatgtgagaacagaaccaacttcagatcag
tttatgatttatgtcactgatgggaagcatcattcagtggagaccccattttatgtcctg
atcaacccaacgaatgatgaagtcccagaattcatagcaagaaacataactgtgcaggag
ggccacatacaagaactagattcctctgtaatcaacgtgattgatctggatgttcctcaa
gatcatctgatgtttacaattatccagcagccccggcatggattcctcattaatggagtt
tatggcaatgacataatgagttacaaacgattcattagcaatcaccacaatcatgagttt
cctgtgcatgacttctccatgaagcttcttaaaaatggactgaggctggtgtacatgcat
gatgactctgaaaacctcactgatggttttaccctccagctgtccgatgggaaacataaa
gtcctcagaaccattttggtaaaggtcatcccggttaatgatgagaaaccaatgctgagc
aagaaggatgagctagaggtgaacatgggtgaaaccagaataatttctagtgctgttctg
tcagctgaagataaagatacccctagggagagaatttactatttatttgaaaaaattcca
gaatatgggcagcttcagctcaaggttggtggggagtgggtgactctccaaactgaaatg
aagtgcacccaggaggaaatagatatgaatcttgtgagatatgtgcatacaggagctatg
ggatccaggaaccaagacagcttcacatttcatctgtgggatggggacaacaggtcccca
gcactggacttccacataactatcaaggatatagaaaagggggatattgctgttttcata
aggccacttactgtaactaagggggatagaggttacttgacaactgatgttctccttgca
attgatggaactgacaaaccagaagagctcctctatgtgataacttctccacctcagtat
ggacagctgcagtacgtcaggtatcctggagtccccattgcaagtttcagccaaatggat
gtagcaggtcaagcagtctgctatgtccacagtagcaaggcagctgctccccaagatcta
ttcagatttatcatcagcaatggactgaagactaaacatggaacgttcgagatcatgctg
gaaacagtggaccaagctttgcccatagtgtctaggaacaaggggttaagattagtggaa
ggcactatggcactcctttctcctgatgtcctgcagctttcagacccagacacttcctca
aagaaccttactttcctcttggcacagctccctcaatatggccatctgtaccaccgaggg
gcagtgctgctgcagcacaattttacccagcaagatgtggacaacatggacattgcatat
aaacacggaggaggggattcccagattgacaggtttacatttgttgcaacagacaggact
aatgcaggcttccttgtagatgggaaggtgcaaatggagcctgtggcattcatcattcag
gtggaccatttggacaaaactgcaccaaaaattgttcatctccgttgtgcttcagatgta
gagctcctaaaaaatggcaaacatgggatttacattactgccaggtccttgaaggcatat
gaccctgatacagaagaggatgaagttatttttaagattttacgaggccctcgttatggc
tacctggaaaatataacaacaggtggatttattcaggaaggattcagccaaaaggattta
aatagcaaaatcatattttatgtcatcaatccatcctgcggggtgaattcggacagtttg
gattttcaagtcacagatcccaccagaaactctgcggccccccaaactctggaactgagg
tggtctcaaattgaaatgcaacaggctgcgtatgaggtgtgtgagaatgtcggaatgttg
tctttgaaaatcaccagaacagggcattccatagactctgcctttattgcagtgaaggtt
aaagaagtgtctgctacattgggaaaggattttactgtgactccctcaaagctcattcag
tttgatccaggaatgtcaaccaagacgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtagttctgaactcccctgtgaatgcaattcttggcacc
aggacaaaaactgtagtgaaaattctggactcaaaaagaggtcaatgcagctctttccga
tcctctggccaaaacaagcacaacttatgggggacaggcacattgcttccagtttcctca
ggctcttcattgctctccaatcccagcactgttcacttggaagaaatcccaccttcctct
tcaaaagagatgatggtgcatagaggggatgtgttacaggaattcaacgtggtgaatctg
tcaaggatgaggcttagagccgtcagaaatggcagaatagttcgtccttcatctgtgtta
agaaatggcaccgatgtggcttttagatatcaggggttggtttctctcagagctgagaat
gacacctcatcagctaatgcaaacaaggctaatgagtcaataattaaccaagggcagaca
aagataaatatgatctcctccaggaagatagaagtcccacaagctgataaggcagaattg
atgtctgaatcacacgctagccaacaggacccagtcctctcattaccaaagagctgcact
cctgatttagaagggctcttgcattttgacgaacacacccaaaacttatttcagtgtgat
gggatttcatggaagttatggacttcgaaaagcaaggatgttagcatgaaaaaatgccca
tctggatggagccatcatggtggcagctgttatttcctggttacagatcagaaagccact
tggaacacagctgctcgggcttgccgagaacaatatcttggaagtctagcaagtgtggtg
actaaacaacacatgcaatggctgtgggatttcagtggaaggaagcccttttggataggc
ttgaattaccatgtcaatcctggccactgggaatggaatggaggagaacctgtcaccttc
acaaattggagaagaagaccatctcacagttcaaagcaaggaaagaattgtgttttggta
caaaggcgaggaaactggcaagcaaaagactgtaggaagggtaatcggcataactatgtc
tgctcaagaaagctgtaa
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integrated database retrieval system
