KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102446812
Entry
102446812         CDS       T02980                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102446812 (HLTF)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102446812 (HLTF)
Enzymes [BR:pss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102446812 (HLTF)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102446812 (HLTF)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102446812 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX DEAD zf-C3HC4_3 zf-RING_5 zf-RING_2 zf-ANAPC11 ResIII RING_XB3-XBAT31 zf-C3HC4_4 HDA2-3 zf-rbx1 zf-Nse zf-RING_6 Prok-RING_4
Other DBs
NCBI-GeneID: 102446812
NCBI-ProteinID: XP_025036939
Ensembl: ENSPSIG00000014558
LinkDB
Position
Unknown
AA seq 1006 aa
MDIVRTAESATSSATCRDSAWKYLQSAHHGRERNNSYYTSRDFYSQFGLEDFLCTDDIPG
TDEDTDSAVLFGTLRGNVVGLRYYTGIVNNNEMVALQREPNNLYDKNAVKVNNVNGNQVG
HIKKELAAPLAYIMDNKLAIVEGVVPYGANNAFTMPVQMSFWGKEENKQAVLDRLKMHGF
KLAPPLKSSEFDFGSSWVSRRAGPSYIALGHAAVQMTTEQLRSEFDKLFEDLKEDDKTHE
MEGPEAIGTPLLPHQKQALAWMVSHENSKELPLFWEEKNNFYYNTLTNFAEKERPENVLG
GILADDMGLGKTLATIALILTNFHDGKPLPVKKIKSDQLHKEFGVTGVKNEGHELLEGTS
CNVEPSISNEKSEIVQSQCCSSQLKGDKSEKTNYILISDSEESEEWLPQQTNKCVREVPT
TRKRSKPASCIIQEDTGFASALAAPSTPLKKKAKKKGTTSIQSVKKNDCEDGSRTTLIIC
PLSVLSNWIDQFEQHIRPDVCLNIYVYYGPDRSKDPVFLSKQDVVLTTYNVLASDYSRTD
SLLHRLKWLRVVLDEGHTIRNPNAQLTKAALNLEAQRRWILTGTPIQNSLKDLWSLLSFL
KLKPFTDREWWHRTIQRPVMLGEQGGLRRLQSLIKNITLRRTKTSKINGKPVLELPERKV
FIQYVTLTEEERKIYQSVKNEGKAAISRYFNEGTILAHYADVLGVLLRLRQLCCHPHLCT
NASSSSFQIGNSTPEELREKLVNKMKLILSSGSDEECAICLDSLNLPVITHCAHVFCKPC
ICEVIQSEQPNAKCPLCRNELRVEHLVECPLEESNPSIAKQGDQEWISSSKISALMHALI
DLRKQNPAAKCLIVSQFTTFLSLIETPLKESGFVFTRLDGTMTRKKRVQAIKHFQDSHAG
SPTIMLLSLKAGGVGLNLTAASQVFLMDPAWNPAAEDQCFDRCHRLGQKQDVVITKFIVK
NSVEENMLKIQNKKRELAAGAFAAKKPTASEVKQTKINEIKTLIDL
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggacattgtacgcacagctgagtctgccacatctagtgccacctgcagagattctgcc
tggaaatacctacaatctgcccatcatggaagagagagaaacaattcctattatacttct
cgtgatttttattctcagtttggattagaagactttctatgtacagatgacattcctggg
acagatgaagatacagattcagctgttttatttggaaccttgagaggaaatgtggttgga
ttacgttattacacagggattgttaacaataatgaaatggttgcacttcagagagagccc
aataacctctatgataaaaatgcagtaaaagtaaataatgtgaatggaaaccaggtaggc
cacatcaaaaaagaacttgcagcacccttggcatacatcatggacaataaactagcaata
gttgaaggggttgtcccttatggagcaaacaatgcctttactatgcctgtgcaaatgagt
ttttggggaaaagaagaaaataagcaagctgttctagatagactgaaaatgcatggattt
aaattggctcctcctttaaaaagttcagaatttgattttggatcaagttgggtttctaga
agagctggaccaagctatattgctttaggacatgctgctgttcagatgacaacagaacag
cttagaagtgagtttgacaaattatttgaagatctgaaagaagatgataaaactcatgaa
atggaaggaccagaggctattggaacaccattacttccacaccaaaagcaggctttagct
tggatggtttcacatgagaacagtaaggagttgccactgttttgggaggagaaaaataac
ttttactataatacacttacaaacttcgctgaaaaagaacggccagaaaatgttcttgga
ggaatactagctgatgatatgggattgggtaaaacacttgcaacaattgcattaattctt
accaactttcatgatggcaaacctcttcctgttaaaaagattaaaagtgatcagttgcat
aaggaatttggtgtcactggtgtgaaaaatgaaggacatgaacttttggaagggaccagc
tgtaatgtggagcctagcatttctaatgagaagagtgaaattgttcagtcacaatgttgt
agttcccagctaaaaggagataaatctgaaaaaaccaactatatattaatcagtgactca
gaagaatctgaagagtggctgccacaacaaacgaataaatgtgtgagagaggtcccaaca
accagaaagagaagtaaaccagcttcttgcattattcaagaagatacaggctttgcatct
gctcttgcagctccatctactccattaaaaaagaaagcaaagaaaaaaggtactacaagt
atacagtctgttaagaaaaatgattgtgaagatggctccagaacaacactgatcatatgt
ccactctctgtcctgagcaactggattgatcagtttgaacaacatatcaggccagatgtt
tgcttgaatatatatgtttattatggtcctgaccgcagcaaagacccagtatttctttca
aaacaagatgtagtactgacaacctacaacgtcttagccagtgattatagcagaactgat
agcctgttacacagattaaagtggctgagagtggtgttggatgaggggcacactattcga
aatccaaatgctcagctgactaaagctgcgttaaatctggaggcacagaggagatggata
ctgacaggcactcctatccagaattccttaaaggatttgtggtctcttctttccttttta
aaactgaaaccttttactgatcgagagtggtggcacagaacaatccagcgccctgtcatg
ctgggagagcaagggggactcaggcgtttacagtccctaattaaaaacatcactctgaga
agaacaaaaacaagcaaaattaatggaaagcctgttttggaattaccggaacgtaaggta
ttcattcagtatgttacacttacagaagaagagagaaaaatctatcagtctgtgaagaat
gaaggcaaagctgctattagcaggtattttaatgaaggaactattctggcacattatgca
gatgtccttggtgtcttgctcagattgaggcagctgtgttgtcatcctcatctttgcaca
aatgcatcatcttctagttttcaaataggcaatagtactcctgaagaattacgtgagaag
ttagtaaataaaatgaaattaattctgagctctggctcagatgaagaatgtgcaatttgc
ttggattctctgaatcttcctgtgataacacactgcgcacatgtgttttgtaaaccatgt
atttgtgaagtcatccaaagtgaacagccaaatgccaaatgtcctctttgtaggaatgaa
cttcgagtcgaacatttggtagaatgccctctggaggagtcaaatcctagtattgcaaag
cagggtgatcaggaatggatatccagttcaaaaatcagtgctctaatgcatgctttgata
gacctaaggaagcagaatccagctgcaaagtgtctgattgtttcacagttcaccactttc
ctgtctctaatagaaactccactgaaagaatcaggatttgtgttcactcgtttggatgga
accatgacacggaagaaaagagtacaagcaattaagcacttccaagacagccatgcaggg
tccccgaccattatgctgctgtccctaaaagctggtggagttggtttaaatctaacagct
gcttcacaagtgtttttaatggatcctgcttggaatcctgctgcagaagatcaatgtttt
gacagatgtcacagacttggccagaagcaagatgttgttatcactaagttcattgtgaag
aattcggtggaagaaaatatgctgaaaatccagaacaagaaaagggaacttgcagcagga
gcctttgcagctaaaaagcctactgctagtgaagtaaaacaaaccaagatcaatgaaatt
aagacactgattgatttataa

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