Pelodiscus sinensis (Chinese soft-shelled turtle): 102447004
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Entry
102447004 CDS
T02980
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102447004 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447004 (XRCC5)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102447004 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
102447004
NCBI-ProteinID:
XP_006124793
Ensembl:
ENSPSIG00000013929
UniProt:
K7G622
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MISLKCAPSHSNQFGTFFQAAIVLCMDVGFAMSNSAPGEESPFEQAKKVMTKFVQRQVFA
ESKDEVSVVLFGTDDTQNTLASGDQYQNITVQRHLMLPDFDLLEEIQNAIQPGSEQADFL
DALVVCMDLLQKETVGKKYEKRHIEVFTDLSSPFSEDQLEIIIANLKKTGISLQFFLPFP
VDDEDGSGDLGDGRHSEMYRNSFPRKGLTEQQKEGICMVRKLMFALEEGGLDEIYTFRES
LERLSMFKKIERRPMAWPCQLTIGSNLSIRIVAYKSLTEEKVKKSWTLVDAQTLKKEDLQ
KETVYCLNDDDETEVQKDDLVQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFSRASQ
IQRHHYMGSQVLKVFAAKDDEAAAVALSALIHALDELDVVAIVRYAYDRRSNPQVGVAFP
YIKDAYECLIYVQLPYMEDLRQYMFSSLKNNKKYTPTVDQLSAVDSLIDSMSLVYEDEDG
ETTEDLFKTSKIPNPQFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEAPQEVRETSQAPL
EKIKALFPLKDAGKKKEQKTAQDVFKNNNEDEPSAKKAREENEEGGFSISNLAEGNVTSV
GSINPAENFCVLVRQKNANFKEVSRQLANRIEQFLETKGLQYYMKSINCIRVFREEAIKL
SEVQCFNDFLRDLKEKVEDKTLADFWEILIQDGISLITKDEAEGSSVTSEEAKKFLAPKE
KPTETPSVAGEGGDVDDLLDMM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatttcactgaagtgtgccccatcacattctaatcagtttggtactttcttccaggca
gccatagtgctgtgtatggatgtaggctttgcaatgagcaattctgctcctggagaggag
tctccatttgagcaagctaagaaggtgatgacgaagttcgtgcagcggcaggtgtttgct
gagagtaaagatgaagtctctgtagttctgtttggtacagatgatacacagaataccctt
gccagtggtgatcagtatcagaacattactgtacagagacatctgatgctaccggatttt
gacttgctggaggaaatacaaaatgcaattcaacctggctctgaacaagcagacttcctg
gacgcacttgtagtgtgcatggacctgcttcaaaaggaaaccgtaggaaagaaatatgag
aagcgacacattgaggtgtttacagacttaagcagtcccttcagtgaggatcagctggaa
attatcatcgctaacttgaaaaaaacgggaatctcactgcaatttttcttgccatttcca
gtggatgatgaagatggaagtggggatttaggtgatggtcgacattctgaaatgtataga
aactcttttccaaggaagggcttaactgagcagcagaaagaaggcatctgtatggtgaga
aaattgatgtttgctttagaggaaggaggcctggatgaaatttacactttcagagagagc
ctggagcgtctttcaatgtttaaaaaaatcgaaagaagacctatggcatggccctgccag
ctaactataggttctaatctgtctataaggatcgtggcatacaaatcactcacagaagag
aaagtgaaaaagtcgtggacacttgtggatgcccagaccttaaaaaaagaagatctgcag
aaagagacggtttactgcttgaatgacgatgatgaaacagaagttcagaaagatgatctt
gttcaaggattccgctatgggagcgatatagttcctttttctaaagtggatgaggagcaa
atgaaatacaaaaccgaaggaaagtgtttttctgtgttgggattcagcagagcatctcag
atccagaggcatcactacatgggcagccaggttctgaaagtctttgcagcgaaagatgat
gaggctgcagcagttgctctttctgccctgattcatgctttggatgagttggatgtggtg
gccatagtgcgttacgcttacgacagaagatctaatcctcaggttggcgtagcctttcca
tatatcaaggatgcctatgagtgtctgatatatgtgcagctaccttacatggaagacttg
cgacaatacatgttttcctctttgaaaaacaacaaaaagtacactcctacagtggatcag
ttatctgcagttgactctttgattgactctatgagtttggtttatgaagatgaagatggg
gaaacaactgaagacttatttaaaaccagcaaaatcccaaaccctcagtttcagaggtta
taccagtgcctgcagcataaggcttttcatcctgacaagccactgccccccatcgaacag
caccttttagagatgttggaggcacctcaagaagtgagagaaaccagccaggccccactt
gaaaaaataaaggcacttttccccctgaaagatgctggaaagaagaaagagcagaagact
gctcaagatgtcttcaaaaacaacaacgaagatgaacccagtgctaaaaaagcaagagag
gaaaatgaagaaggtggctttagcatctcaaaccttgctgaaggcaatgtcaccagtgtt
ggaagtattaacccagcagaaaacttctgtgttctagtgaggcagaagaatgcgaacttt
aaggaagtgagccggcagctggcaaaccgcattgaacagtttttggaaactaaaggttta
cagtactacatgaagagtatcaactgcattagagttttcagagaggaggccattaagctg
tcagaggtgcagtgctttaatgattttttgcgggacctgaaagaaaaggtggaagataaa
accttggctgatttctgggagattctgatacaagatggaatttctttgatcaccaaagat
gaagcagaaggtagttcagtgacaagtgaggaagccaaaaagttcttggcccccaaagaa
aaaccaactgaaactccgtcagtagccggggaaggtggggatgtggatgatttgctggac
atgatgtaa
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