Pelodiscus sinensis (Chinese soft-shelled turtle): 102447175
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Entry
102447175 CDS
T02980
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102447175 (MED16)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
102447175 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_THOC3
DSE1_N
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
102447175
NCBI-ProteinID:
XP_075758735
LinkDB
All DBs
Position
19:complement(16228814..16245609)
Genome browser
AA seq
830 aa
AA seq
DB search
MDLAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTHMIHILDTEHPW
DVYSINSGHIEIITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPI
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADIAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQTMAVFYGSSSQRPVDEQAIKRQRAAGPLVHF
KAMQLSWTSLALVGIDNHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPSMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTVARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMLRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCRDETHPSEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQSKQLIRLQFGKAPGLVGHTVSSQFDVFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKTTAVKQWEQRWIKTCLCGGLWRRMPLSYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcatatgtctgtgagtgggagaaaaggcccaaaagcaaccattgtccttcc
atcccgttggtgtgcgcgtggtcctgcaggaacttgattgccttcacaactgacctcaaa
aacgaggaggaaaaagatcttacccacatgatccatatcttggacacggagcatccgtgg
gatgtttattccattaactctgggcacattgaaatcatcacctgcttggaatgggatcag
tcaggttccaggctcctgtcagctgatgcagatggacacatcaagtgctggagcatgaca
gatcacctggccaacagctgggagaacactgtgggcagcatggtggagggagatccaatc
gtggctctctcctggttgcacaatggggtgaagctggccctgcatgtggaaaagtctgga
gcctcgaactttggtgagaaattttcccgggtcaagttctctccctccctgactctgttt
ggggggaagcccatggaaggctggattgctgtgaccatcagcggcctagtgaccgtctct
ctcctcaagcccaacgggcaagtgttgacctccacggagagcctttgccgcctgcgctgc
cgtgtcgccctggcggacattgccttcaccggcggggggaacatcgtggtggccacctcg
gacggcagcagcacctctcccgtccagttttacaaggtctgtgttagtgtggtgaacgag
aagtgcaaaattgacacggagattctgccctcgcttttcatgcggtgtaccacggaccct
gcccgcaaggacaagtacccagcaatcactcatctgaaattcctcgccagggacatgtca
gagcaggtgctgctctgtgcctcaaaccagaacagcagcatcgtggagtgctggtctctc
cgcaaagagggcttgccagtcaataacatcttccagcagatctctcctgtggttggagac
aagcagccgatgatactgaaatggcggattctctctgccaccaacgatttggatcgcgtt
tcagctgtggctttgccaaaactgccaatctccctaaccaatactgacctcaaagtggct
aatgacaccaaattcttccctggactgggtcttgctttggccttccacgatggcagcgtg
cacatcgttcatcgcttatccttgcagaccatggcagtgttctacggatcctcttctcag
cgcccagtggacgagcaggcgatcaaaaggcagcgagcagccggtcctttggttcacttc
aaagccatgcagctctcctggacgtccctggccctggttgggattgataaccatggcaag
ctgagcatgctccggatctctccctccatgggccatgtgctggacatgaacatgtctcta
cgccacctgctcttcctgctggagtactgcatggtgacggggtacgactggtgggacatc
ttgctgcacgtgcagcccagcatggtgcagaacctggtggagaagctgcacgaggagtac
atgcgccagaacgcagccctgcagcaggttctctccacacgcatcgtcgccatgaaggcc
tctctctgcaagctctcctccagcacggtggcgcgcgtgtgcgactatcacgccaagctc
tttctgatcgccatcagctgcaccctgaaatccctgctccgcccgcacttcctcaacacc
cccgacaagagccccggcgaccggctcactgagatctgctccaagattaccgacatagac
attgacaaagtgatgatcaacctgaagacagaggagtttgtcctggagatgaccacactg
cagtccctgcagcaactcatccagtgggtgggcgacttcgtgctctatctgctcgccagc
ctcccgaaccagggatcccctgtgcggccgggacacagcttcctgcgagacggggcatcg
ctggggatgctccgagagctcatggtggtgatccggatctggggcctcttgaagccaagc
tgcctccctgtttacacggcaacctccgatacccaggatagcatgtccctgctcttccgg
ctgctgactaagctctggctgtgctgtcgagacgaaactcacccgagcgagccggacgat
accctgattgacgagtgttgtcttctccccagccagttgctcattcccaatatagactgg
ctgcccatcaacgacggcattatcagcaagctgcagagcaagcagctcatcaggctgcag
ttcgggaaggcccctggactcgtcggccacactgtctcgtcacaattcgatgtctttgtc
agggcacctgggcagccaaaaattgatcacttgagacggctgcacttaggggcgtatcca
acagaggagtgcaagtcatgtactcgatgcggctgcgtaaccatgctgaaatcacctaac
aaaaccacagcggtgaaacagtgggagcagcgctggatcaaaacctgcctctgcgggggg
ctttggaggagaatgccgctcagctactcctga
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