Pelodiscus sinensis (Chinese soft-shelled turtle): 102447191
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Entry
102447191 CDS
T02980
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X2
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04140
Autophagy - animal
pss04148
Efferocytosis
pss05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102447191 (VPS18)
04148 Efferocytosis
102447191 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102447191 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102447191 (VPS18)
Membrane trafficking [BR:
pss04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102447191 (VPS18)
Hops complex
102447191 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Vps39_2
zf-RING_16
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
Nup54_57_C
DUF2229
zf-ANAPC11
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
102447191
NCBI-ProteinID:
XP_006128748
Ensembl:
ENSPSIG00000014228
UniProt:
K7G6M5
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLSRSAAQPQSRASVGIPHSGFVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGRDTLFRIDLGKADEPNQVELGRKDEARVYKMFLDHTGSHLVIALNTSE
CLYLNRSAQKVRALSRWKGHLVECVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
FFSTNPDQYFRLVYTLEEEAGPTPVCCLEIERVLDGKCFIIATTCKRLFQFAGKALEGTE
QQGFGFVFGMHVDHLPSFREFPASFGYSEIAFYTPKLRSSPRSFAWMMGNGVLYGTLDYG
RPDSILSDERVWEYPSDVDVSANKPISIVLTQFHFLLLLPDKVIAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPTVGQVWIHTEKVVFRYHVQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAREAEHSFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLANL
KSSEKTQTTLLTTWLTELYLNRLGALEGDASKRNLYEETREKFCSFLSSPKNKECLFNNR
VSIYELLASHGDTEHMVYFSVIMQDYERVVAHHCQHDDYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGTKLDARKLIPALVNYSQSESTQQISEAIRYMEFCVCELEETE
QAIHNYLLSLYALCRPVSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHVYKVM
ELYEEAVDLALQVDVDLAKSCADLPEEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQAVFPNLPAWKQAKLEDLQK
KLGATSQPSKAHHRPKDIDAASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEERQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaagattcgctgtcccgctcggccgcccagccgcag
agccgcgccagcgtgggcatcccgcactccggatttgtgaatgctcggctggagaaggag
acaccaatatttaacaagcaaaggattgatttcactcctccagagaaaattaacagtcta
gtggtctcctctaatcagctttgtatgagccttggcagagacacccttttcaggattgat
cttggcaaggcagatgaacctaatcaggtggagttgggacgcaaggatgaagccagagtc
tacaagatgtttttagatcacacaggatctcaccttgtgattgcactgaacactagtgaa
tgcctgtatttgaacagaagcgctcagaaggtgcgggcgctctcccgctggaaaggtcac
ttggttgaatgtgtgggctggaataagttcctgggttcagagacgaacactggtcctatc
ctggtgggaacagcccagggccaaatatacgaggctgagatctctgtcagcgagggaagc
ttcttcagcactaatccagaccagtatttccgtctggtctataccttggaggaggaggca
gggcccaccccagtctgctgtctggaaatagagagagtgctcgatgggaaatgtttcatc
attgccactacttgtaaaagactcttccagtttgcgggcaaagcgcttgaggggacagag
cagcagggctttggctttgtgtttggcatgcatgtagaccacttgcccagctttcgagag
ttcccagccagctttggctacagcgaaatagcattttataccccaaagttgcgctcctcc
ccacggtcctttgcctggatgatgggaaatggtgtcttgtatggtacgttggactatgga
cggcctgactctattctgagtgatgaacgggtttgggagtatccttctgacgtggatgtg
tcagctaacaagccgatttccatagttctcacccaattccacttcctgctgttactgcct
gacaaagtgatagctgtgtgcactctgaatgggcaggttgtcttccaagatgtgttcttg
gagaaatttggctctttgaagcgcatgatcaaagatcccacagtcgggcaggtctggatc
cacacagagaaagttgtattccgctaccacgtacaacgggaatcgagagatgtatggaag
atgtatatgaacattaacaagtttgatctggccaaagagtactgcaaagaccgtcctgag
tgcctagatattgtgttggcaagagaggcagaacactcctttcaaaacaagaggtacttg
gatagtgccaagtgttatgcactgacccagaattactttgaggagattgcccttaagttc
attgaagccaaacaagaggaggcattgatggagtttctgattaagaaactggccaactta
aagtcttctgaaaagacccagacaaccttgttgaccacctggttaacagagctctacttg
aatcggctaggtgctttggagggtgacgcctccaaaaggaatctctatgaggagactcgg
gagaagttctgcagcttcctgagcagccccaaaaacaaagagtgtctgttcaataaccga
gtgtccatctatgagctgctagcaagccacggggacacagaacacatggtctatttttca
gttattatgcaagactacgagagagtggtagcccatcactgccaacatgatgactatgat
gaagccttaaatgttctgtccagacacagggatgaaaagctcttttacaagttctctccg
gtcctgatccagcacatccccaagaaggtggttgatgcttggatctccatgggcacaaaa
ctggatgccaggaagctcatacctgccctcgtcaactacagtcaaagtgaaagcacccaa
cagatcagtgaagctattcgatacatggagttctgtgtgtgtgagctggaagaaacggag
caagccattcacaactatctgttgtctctctatgctttgtgtcggccagtctcgctgctg
tcgtacctagaacaagcaggaaccaaccctaacaggatccactatgacctgaagtatgcg
cttcggctgtgtgcagagcacggacaccaccgagcctgtgtccatgtttacaaagtgatg
gagttatatgaggaagcagtggatctagctttgcaggtggatgtggatttggctaagtcc
tgtgccgacctccctgaagaggatgaggaactccggaagaagctctggttgaaaattgct
cgtcatgtagtccaggaagagaaggatgtaaagaaagccatggcctgcctttctagctgc
aacctgctgaagattgaagatgtcttgccctttttccctgactttgtcaccattgaccac
tttaaagaggctatctgcaactctctggaggactacaacaagcacattgaggagctgaaa
agagagatggaggaagccacgcagagtgccaagagaattcgggaggacatccaggagatg
agaaacaaatacggatctgtggagcctcaggaaaagtgtgcagcctgtgactttccgctc
ctaaatcgccctttctacctttttctttgtggtcacatgttccattatgactgcctgttc
caggcagtttttccaaacctgcctgcctggaagcaggctaagctagaagaccttcagaag
aagctgggagccacaagccagccctccaaagcccatcatcgtcccaaggacatagatgct
gctagcttgggaaaagggcagcagagtagggaacagatcaaggcagacattgatgatatt
gtggcggctgaatgtgtgtattgtggggagttgatgatccggtcaattgacaagcctttc
attgacccacaaaagtatgaagaggagagacaaagttggctgtag
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integrated database retrieval system
