Pelodiscus sinensis (Chinese soft-shelled turtle): 102447273
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Entry
102447273 CDS
T02980
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102447273 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102447273 (IRF1)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102447273 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
102447273
NCBI-ProteinID:
NP_001303979
Ensembl:
ENSPSIG00000010399
UniProt:
V5RF14
LinkDB
All DBs
AA seq
316 aa
AA seq
DB search
MPVTRLRMRPWLEMQIDSNKIPGLMWINKDKMMFQIPWKHAAKHGWDLEKDACLFRSWAI
HTGRYKIGEREPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKLQK
KERKSKSSRDSKSRSKRKSHDDLRVDEAVEALNNSLPDDHSGYTVHFAEQEVETENASIT
LDLSPCDMTALAGWRNPMEIAMADSTNDLYQLQVSPLASSSEVTDDDAEEMKEQLYKLFE
QQDWHTTSVGGKGYLTNEPGTQNICSNFSYKKQDSEIDTTSGEIEFRFCTDLKNSLEFSW
LDTVRSSGIQVIPCSL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaacaagactgcgcatgaggccatggctggagatgcagattgattccaataaa
ataccgggtctgatgtggatcaacaaggataagatgatgttccagatcccctggaaacat
gcagctaagcatggatgggatctagaaaaagacgcctgccttttccgaagctgggccatt
catactgggagatacaagataggtgagcgagagcccgatcccaaaacttggaaggcaaat
ttccgctgtgccatgaattcactgcctgatattgaggaggtgaaggataaaagtatcaac
aagggctccagtgcagtccgggtttacaggatgctaccacccttaacaaagcttcagaaa
aaagaaaggaagtcaaagtcatctagagactcaaaaagcaggagtaagagaaagtcacat
gatgacctgagggtggatgaggcagtcgaagcactgaacaacagtctaccagatgaccac
agtggttatacagttcattttgcagaacaggaagtggagacggagaatgcctccatcacc
ttagatctctcgccatgtgatatgaccgcactggcaggatggagaaatccaatggaaatt
gcaatggcggacagcacaaatgacctttaccagcttcaagtgtcacctttagcttcatct
tctgaagtaacagatgatgatgcagaagaaatgaaagagcaactttacaagctgtttgag
caacaggactggcatacaaccagtgttggtgggaaaggatatcttactaatgagcccggc
acacaaaatatctgcagcaacttcagctacaagaagcaagattctgaaatagatacaacc
tcaggggaaatagagttcagattttgtaccgatctgaaaaacagtttagaattctcctgg
ctggatacagttcggtctagtggtatacaagtcattccttgtagcttgtaa
DBGET
integrated database retrieval system
