Pelodiscus sinensis (Chinese soft-shelled turtle): 102447327
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Entry
102447327 CDS
T02980
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
pss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102447327 (PALB2)
03460 Fanconi anemia pathway
102447327 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447327 (PALB2)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102447327 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102447327 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
102447327
NCBI-ProteinID:
XP_025038304
Ensembl:
ENSPSIG00000005737
UniProt:
K7FDS1
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MSVTEESQNQLPRSGMALVSRGRESACEVPPVSAGQRLENQMASAEELGSPVFKGRNTIS
STKNNIPTALKLVIVREEKDLTPQDPRVGDWQEMPKENVFLSVPEPRSYMSMGGSNVQQP
LSPCAVDICASCEPTAPCLVSDSPVSFENVGDAEKELACVENKMENVCVDCEELCRSLDL
SADNQPSSAGRGNPSLRELRTHKERNHSEPSSSRLLNTDAVLGNVEEHLENPEAPSEAGS
PVLETTTPAAESALSSCTMIEGLLFPVEYYVRTTRRMSACQRKVDLEAVILSQLGRSRKG
LRNKQKQLNSNSDQLYQEPAQSDVQAGGTPFPFLGAESDPVSSSSSPKSLPSSGESCTSS
GSLSQKSIVSTRRAKGRTWRRGRGRGGSTCRPALDASQARPDNSDLIEPKEKSARISSDS
HSAKENCEGDPESSSVGKTRVLVTAEAEMSGIIWPAEADLPEGNQTFGKCHQPPLEQMQT
PLPAVKETPPRHDLPSTSVKRKARQGSKGKRGRSQQMGLEDLTPLGRLDLDPVAFDPPFH
FQNEMLSLKWLPSKLDIRDFHLPDEEFGFLKLEKLQSCPVKELEPFVASGSGRGQHHAGG
SVRLGDVRHTVNTEGKSPENSFMSPAKVLSPTQHHSAGLLHKSRLSPRELLLTPASTVSA
DAIAQRNSQIRLPAFPVLGATPAVLSQSDTLSVLPLQVKTSPFKEPARYGMDGRERNNST
SVLHSESCRMGSDGISDEAITLKEHQPARSSSPECCKAKDKTTAEQLAVALSDLGDRSLH
LASKLKNPSSSCAVDVSTVWWESAGCTELCILTACETSVSLWKPLASSQWRKAYTWHLAE
IPVIQIVPLPDVCNLVCVALGELEIGEIRLLLCSSEDGSLKQSLMRTGNIKAVLGLTNRR
LVSSSGALQDQQIEIISVLEAGRSKERQSLMPPEETILAFAEVEGIRDALVGTTAMNNLV
IWNLKTGQILKKMHVGYSYPASICHRAYSDSGLLFVVLSHPHAKENESCGNPAFRVRAFN
PRTARSTGVMFFSLPPGHSGRYLEGEVKGGSAAAVLTSGTIAVWDLFLGQCTALLPPNTD
GKWSLVRWSVTDSCLLAGQKDGSVYMYHYSL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactgaggagagccaaaatcagctgccaaggagtggaatggctttggtctca
cgggggagagaatccgcttgtgaagtgccaccagtcagtgctggtcagaggttggaaaat
caaatggccagtgcagaggagcttgggtcaccagtgttcaaggggaggaataccatctcc
agcaccaagaataacattccgacagccctcaagctggtcattgtgagggaagaaaaagat
ttaactcctcaagatccacgggtaggagattggcaggaaatgcccaaagaaaatgtattt
ctgagtgtccctgagccacgttcatacatgtcgatgggtggcagtaacgttcagcagcct
ttgtctccatgtgccgtggacatctgtgccagctgtgagccaacagcaccgtgtttagtg
agcgatagccctgtttcatttgaaaacgtgggtgatgcagaaaaagaacttgcctgtgta
gaaaacaaaatggaaaatgtgtgtgtggattgtgaagagttatgtaggtccttggattta
tctgcagataatcagccatcctcagcaggcagaggcaaccctagtcttagagaactcaga
acccataaagaaagaaaccacagtgagcccagtagctcaaggctgctgaacactgatgct
gttctgggaaacgttgaagaacatttggagaatccagaggccccgagtgaagcagggtct
cctgtcctagagacgacgactcctgcagcagaaagcgcactgagctcttgcacaatgatc
gaaggacttctctttcccgtagagtattatgttaggacaactcggcgtatgtctgcctgc
cagaggaaagtagacctggaggctgtcattctcagccagctgggcaggagcaggaagggg
ctgcgaaataaacaaaagcagctaaattcaaattcagatcagctctaccaagaaccagcc
caaagcgatgtgcaggcagggggcactccgttcccttttctaggcgcagagagtgaccca
gtgagttcgagcagctctccgaaatctctcccttcctcgggggagagctgcacttccagt
gggtctctttctcagaagagtattgttagtacacgacgagctaaaggaagaacctggcgg
agaggaaggggcagagggggttctacctgcagacctgccctggatgcgtcgcaagcacgt
cctgataattcagatctcatagagccgaaggaaaagagtgctcgcatctcaagcgattct
cacagtgcaaaggaaaactgcgagggtgacccagagagctcatcagtaggaaaaacaagg
gtgcttgtcaccgcagaagcagaaatgtcaggcattatatggccagctgaagctgatctt
cctgagggaaaccaaacatttggcaaatgccatcagcctcctttagaacagatgcaaact
ccactgcccgcagttaaagaaactccacctcgacatgatctcccaagtacctctgtgaaa
cgtaaagcgagacagggatctaaaggtaaaagagggcgcagtcaacagatgggcttggaa
gatctgactcctctaggccgtcttgatctggatcctgtggcctttgaccctccctttcac
ttccagaatgagatgctcagtctcaagtggctgccctctaagctggacatcagagacttt
catttaccggatgaggagtttggtttccttaaattggagaaactacagtcctgcccagtg
aaagagctggagccctttgttgcttccgggtctggacgcgggcagcaccatgctggaggc
agcgtgaggctgggggacgtgagacacacagtgaatacagaagggaagagtccagaaaat
agctttatgtctcctgcaaaggtgctgtcgcctacacagcatcactcagcaggactgttg
cacaagagcaggctttctccaagggaattgctgctgactccggcaagtactgtctcagct
gatgccatcgcccagcgtaactctcagattcgcctacctgctttccctgtcttgggtgcg
accccggccgtcctgtcacagtctgacacgctgtctgtgcttcctttgcaagtgaaaacc
agtcccttcaaagagccagccaggtatggcatggatgggagggagcgtaataactccaca
agcgtgttgcactcagagagctgcaggatgggatctgatggcatctctgacgaagccatc
accctcaaagagcatcagccagcaaggagcagctccccggagtgctgcaaggcaaaggac
aaaacgacagcagagcaattggctgtagcattgagtgacctgggagacaggagcttgcat
ctggcctcaaagctaaagaacccctcaagttcctgtgccgtggacgtgagcactgtctgg
tgggaatcagctggctgcacggaactgtgtatcctcactgcttgtgagacttcagtctct
ctgtggaaacctctggcttccagccagtggagaaaggcgtatacctggcaccttgcagag
attccagtaatacaaattgttcccttgccagatgtctgtaatcttgtgtgtgttgccttg
ggagagctggagattggagaaataaggctcttgctttgttcttccgaagatggctcctta
aagcaatcgctaatgagaactgggaacatcaaagctgttcttgggctgacaaacaggagg
ctggtcagtagtagcggggcccttcaagaccagcaaatcgagataatctccgttttggag
gcagggagaagcaaagagaggcagagtttgatgcccccagaagaaaccattctggcattt
gctgaggtggaagggattagagatgctttggttggcaccactgccatgaacaaccttgtt
atttggaacttgaaaaccggccagattctgaaaaagatgcatgttggttattcctaccct
gcctccatctgccatcgtgcctattctgactctggcctcttgtttgttgttttaagtcac
ccacatgccaaagagaatgagtcctgtggaaaccctgcattccgggtgagagcgttcaat
cccaggacagccagaagcactggggtcatgttcttctccctccctcctggacacagcgga
aggtacctggaaggtgaagtgaagggtggctccgcggcagctgtgctaacatctggaaca
atcgcagtgtgggacttatttttaggccaatgtactgctctgcttccaccaaatactgat
gggaaatggtctttggtcaggtggtcagtcacagattcctgtctcctggctggacagaaa
gacggaagcgtgtacatgtaccattattcactgtag
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integrated database retrieval system
