Pelodiscus sinensis (Chinese soft-shelled turtle): 102447337
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Entry
102447337 CDS
T02980
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pss03016
]
102447337 (CDKAL1)
Enzymes [BR:
pss01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102447337 (CDKAL1)
Transfer RNA biogenesis [BR:
pss03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102447337 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
102447337
NCBI-ProteinID:
XP_006121893
Ensembl:
ENSPSIG00000015565
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MFLKMPAACDSLLEDIEDIVSAQDVKPHDRQFVRKSVVPKVRKRGSQKHVQEDDDPPSDS
IIPGAQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENAAEADLWLLNSCTVKSPAEDH
FRNSIKKAQEDDKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRL
LGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYSIEEL
VNRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYI
LEHLEEMAKILNHPRVYAFLHIPVQSASDSILMDMKREYCVADFKRVVDFLKEKVPGITI
ATDIICGFPGETDEDFQDTMKLVEEYRFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTK
DLSQLFHSYNPYDHKVGERQSVLVTEESFDSQFYVAHNQFYEQVLVPKDPEFMGKMVEVD
IYEAGKHFMKGRPVSDANVFTPSITKPLEKGEVSGITEEFRYVLENGLNMKACPSAGIRE
KASSSRMVVQLLWQQGGSGLKIMSVSLALLAILVTFFTEVFK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgaagatgcctgctgcttgtgattcgctgcttgaagatattgaggatattgtg
tcagcacaagatgtgaaaccacatgaccgacagtttgtacgaaagagcgttgttcctaaa
gtgcgaaaacgcggttcacaaaaacatgtacaggaagatgacgatccaccaagtgatagc
attattcccggtgcacaaaaaatctggatacgcacatgggggtgttctcataataattcg
gatggagaatatatggctggacagttggctgcatatggctacaaaattacagagaatgct
gcagaagcagacttgtggcttttgaacagttgcacggtaaaaagcccagctgaagatcac
ttcagaaactcaattaagaaagcgcaagaagacgacaagaaagtggttttagctggatgt
gttccacaagcccagccacgtcaagattacctcaaaggcttgagcattataggggttcag
caaatagatcgtgtagtagaagttgtagaggaaactattaaaggtcactcggtgagactt
ctgggtcagaaaaaggataatggaaaacggctggggggagctcgattggatttgccaaag
attaggaagaatccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgt
acctactgcaaaaccaagcatgccagaggagacctagcaagttattcaattgaagaacta
gtgaacagagccaaacagtcttttcaagagggtgtttgtgagatatggctgaccagcgaa
gacacaggagcttatggcagagacataggcacagaccttcctacacttctgtggaaactg
gttgaagttattcccgagggagctatgctgagacttggcatgacaaatcctccctatatt
ttagagcatctggaggaaatggcaaagattctcaatcatccaagggtatatgcttttctt
cacataccagtccagtctgcttctgacagcatactcatggacatgaaaagagaatactgt
gttgcagacttcaaacgggtagtggatttccttaaagaaaaagtgcctggaataacaatt
gctacagacatcatctgcggttttccaggagagacagatgaagattttcaagacaccatg
aaacttgtagaagagtacaggtttccaagcctctttattaatcagttttacccacgcccc
gggactcctgctgcaaaaatgcatcaagttccagccgcagtgaaaaagcaaagaacaaag
gatctatcccaactgtttcattcatacaatccttatgatcataaggttggtgagagacaa
agtgttctggtaacagaagaatcttttgattcccagttttatgttgctcataatcaattc
tacgagcaggttctcgtgccaaaggaccctgaattcatgggtaaaatggtagaagtggac
atttacgaagcaggaaaacattttatgaaggggcggccagtgtcagatgccaatgtgttc
actccatccatcaccaaaccattagaaaaaggagaggtttctggtataacagaggagttc
agatatgtgctggaaaatggcttgaatatgaaagcatgcccttctgctgggatccgagaa
aaagcatcgagttccaggatggtggtgcaacttctttggcagcaaggaggaagtggactg
aagatcatgtctgtcagcctggctttactggcaattcttgttactttttttacagaggtg
tttaaatag
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