Pelodiscus sinensis (Chinese soft-shelled turtle): 102447478
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Entry
102447478 CDS
T02980
Symbol
SPIDR
Name
(RefSeq) DNA repair-scaffolding protein isoform X1
KO
K22806
DNA repair-scaffolding protein
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447478 (SPIDR)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102447478 (SPIDR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4503
DUF4502
Motif
Other DBs
NCBI-GeneID:
102447478
NCBI-ProteinID:
XP_025036648
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MLEVTQQRKRVWDAECTSFPDETPLGLRKANVGTAVATSSISSAWIRCGDGFESTSVPEA
SESSEKNSRANKHLGLLLTSAEGTLGVSTADNSEELADIVWSSSGSDLSGDENKKSISRL
YNQKNHVSKAQKTCSSHNLLLEDRSSEGEPQFIEWEKDSDFGDDDEECNGSGKDDKALDI
SDSDSCANSNSLPLEEKEDELPKTVSTEISEYSSDSENLEEGQVDAESSNFGFSKKLQSS
SEPDLVQATSRSASDWLKSAQALLQTPKKQSDKTSRTPEDSAKKRKLLRGGLAERLNRLQ
NRERSAISFWKHQCISEYKTFSGGKSGVLIVKILEVHEECAKQVALCQQLGQLPADSSSE
VDVIDTETRLKVLFTKETAAHLKGGPQDIVHIYPPWQKLLLHNENIPVIMNTYFSQKVLL
RDHTEVKDKTRSPETLHIRRNIISLAQIFRLNDLRDSLPQESAVNQVACTNTIIPKTVQT
HSNAESKLHPFVLNAPNDSLLEVVESQGAAGWKEVQVQVVVQRVYYLPGREGFRWQHQGN
NPINYGTPILNSDLPNVRLCLLVQDAYGMFSEVQLQTPTSGEDIEQHSSIWEAKSCTLTG
MRILQRTTRGRALGLFSLIDSLWPPLVPLKVPGQSQECEAIKSNLPPPSFCYILTTQPDT
RHANVSEEGRISNLYLPPTVHSLKEILQVGDFNQRCSFWARVIYQRLQVKCSVSVGQKEF
WLFVTDFTLQNGAKGNCGNPKTVPIYFASSCVLDKKVMEALTSASHCTIFFKDALQGNGR
IICVERTVLLLQKPLLYTAPEADFSELTGPVKLDELDSTTQANSICTIKGIISGVNESTA
FSWSTCNRCGNDKLEHHPQDRRSYYCNLCSQAVILPVLKMHLEVFLQCPSRPHCTVKVKL
LQKTISSVLMSSSTEDGSYEVKSVLGKEVGLLNCYVQSVSSHPSCVGLEEIILLEAGRK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagtgacccaacagagaaaacgagtgtgggatgctgaatgtacatcttttcca
gatgagacacctctagggttgagaaaagcaaatgttgggacagcagtggctacttcttcc
atttccagtgcatggattagatgtggtgatggatttgagagcacttccgtgcctgaggca
tcagaatcttctgaaaagaactctagagctaataagcatcttgggctactgcttacctct
gctgaaggcacactaggagtttctactgctgacaactcagaggagcttgcagacatagta
tggagctctagtggcagtgatttgtcaggtgatgagaataaaaaatcgatttcaaggttg
tataaccaaaagaatcatgtttccaaagcccagaaaacttgcagcagtcataacttactg
ttagaggacaggagtagtgaaggtgaaccacagttcattgagtgggagaaggacagtgat
tttggggatgatgatgaagaatgtaatggatcaggaaaagatgacaaagccttggacata
tcagactcggattcgtgtgcaaacagtaattctctgcctcttgaagagaaggaagatgaa
ttgcctaagacagtttctacagaaatttctgaatattcatctgatagtgaaaacttggaa
gaaggccaggtggatgcagagtcttccaattttggatttagcaaaaagctgcaatcaagt
tctgaaccagatctggtgcaggctacaagcagatctgcaagtgactggctaaaatctgca
caggcccttctgcagacacctaagaaacaatcagataagacttcaaggactccagaagat
tctgcaaagaagaggaaattactaagaggagggctagcagagagattaaatcggctacag
aacagagagaggtctgccattagcttttggaaacatcaatgtatttcagagtataaaacc
ttttcaggaggcaaatctggtgtattaattgtgaagatcttagaggtgcatgaggaatgt
gctaagcaagttgctctctgccagcagctgggacagctgcctgctgacagctcctctgaa
gttgatgtcattgatactgagaccagattaaaagttctttttacaaaggaaacagcagct
cacctcaagggaggtccacaggatattgtccacatttatcctccttggcaaaagctcctt
ctccataatgaaaatatccctgttatcatgaatacatattttagtcagaaggtccttctc
agagatcatacagaagtgaaagataagacacgtagtccagagacgttgcatattagaagg
aacattatatctttggcacaaatattccgattaaatgacctcagagacagtctgccccag
gaatctgcagttaatcaggttgcttgtaccaatactattataccaaagactgtacagact
cacagcaacgctgagtccaaactacatccctttgtactcaatgccccaaatgactctctc
cttgaagtagtggaaagccaaggagcagcagggtggaaagaagtgcaggtacaagtggtg
gtccaaagggtgtactatctaccaggaagagagggtttcagatggcagcatcaaggaaat
aacccaattaattatggaacaccaattttaaattcagatctgccaaatgttagattatgc
ctccttgttcaggatgcttatggaatgttcagtgaagtgcagttgcagacccctacttct
ggagaagacattgaacagcatagcagcatatgggaagcaaaatcctgcactttaactgga
atgagaattttgcagagaaccacaaggggaagggcactgggacttttcagtctgatagac
agtttgtggcctccattagtacctctgaaagttcctggtcaaagtcaagaatgtgaagcg
attaaaagtaaccttcctcctcccagcttctgttacattcttacaactcaaccagataca
agacatgctaatgtaagtgaggaaggccggatttctaatttgtacctgcccccaactgtg
catagtctaaaggaaattcttcaggttggtgattttaatcaacgttgtagcttttgggca
cgagttatatatcaaaggctgcaggtaaaatgtagtgtgtctgtgggccaaaaggagttt
tggttgtttgtgacggatttcacactgcagaacggggctaaaggcaactgtggaaatcca
aagactgtaccaatatattttgcctcatcttgtgttctcgataagaaggtgatggaggca
ctcaccagtgcttcccactgcactatcttcttcaaggatgctttacaaggaaatggtagg
attatttgtgttgaacgtaccgttctcttgttacaaaagccccttttgtacacggctcct
gaggctgactttagtgaactgactggccctgtcaaactagatgaactggattctacaaca
caggccaattccatttgtaccataaaaggcattatctctggagttaatgagagcacggcc
ttctcttggtccacatgtaacagatgtggcaatgacaaactggagcatcatccacaggat
agacgatcatattactgcaacctatgctcccaagctgtaattttaccagttctcaaaatg
cacctggaagtctttctgcaatgtccatcccgacctcattgcacagtaaaagtaaagctg
ttacaaaaaacaatttcttctgtcctgatgtcatcatctactgaggatgggagttatgag
gtgaagagtgtgctgggaaaagaggtggggttattaaactgctacgtccagtctgttagc
agccatcctagctgtgttggattggaagaaattatcctactggaagcaggaagaaagtaa
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