Pelodiscus sinensis (Chinese soft-shelled turtle): 102447517
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Entry
102447517 CDS
T02980
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
pss03450
Non-homologous end-joining
pss04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102447517 (RAD50)
03450 Non-homologous end-joining
102447517 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102447517 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pss03032
]
102447517 (RAD50)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447517 (RAD50)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102447517 (RAD50)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102447517 (RAD50)
BRCA1-C complex
102447517 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
102447517 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
DUF2703
AAA_24
AAA_13
Motif
Other DBs
NCBI-GeneID:
102447517
NCBI-ProteinID:
XP_006128577
Ensembl:
ENSPSIG00000010890
UniProt:
K7FVK7
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MSKIDKMSILGVRSFGVEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVAHETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGRALKQKFDEIF
SATRYIKALETLRQVRQKQTLRVKECQMELRYLKQNKEKAREIQDQLSNREAQLAASKEN
VKSIENQLEPLKNRLTEIEQNLAKVMRLDNEIKALDSRKRQMEKDNQDLQQKMKKVFQGT
DDQLRDMYQNHQRTVKEKERRLTDCQHELDRASRECQRFNREKSELLVEQGRLQLQADRH
QQDIRTRDSLIQTLAALLELDGFQRAPFNERQINSFHKLVKERQEREVEAASQLMREFTE
KETMKQKQIDDIRDKKTGLEKTIDLKSDIQNKKQLELKNVKYELNQLEESSDRILELDQE
LIKSERELEKTEKNSSVEALESEVQKLQNEKADVDKVLRKLDQEMEQLNLNTMAITQMDM
LKKDKVDKEEQIRKIKSRHTDQLTLLLGYFPNKRQLEDWLHAKTREINQTRDKLAQLNKE
LVSAEQNKNHVSIELRKKEEQLSSYEDKLFNVCGSQDFDCDLYKLQDEIEKTSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRFFETESELQDVISDLQSKLRLAPDKLKSTESELK
RREKKRDEMMALKPIRQTITELKEKDIPDLRNKLQNINRDIQRLKSDVEEQDTLLNTVIP
EEESAKACLQDITLMERYQTDLRDVERKIAQQGTKLQGVDLGRTVLQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQTQIQQLKSTVNELKAEKLQISSNMQRRQQLEDQTVELSTEVQS
LYRELKEAKDQLFPLEATSEKLYLINKKNTSNKVTQEKINEIKEKAKNIHDYVKVIENYI
QGGKEDYKKQKESELDEIKTQLADCEKQKEKISKEMGTIRQDIDTQKIQERWLEDNLTLR
KRNEELKEVEEERKQYMKEMGEMKVPQLKNEQQCLEKKIEDLKKNHSLALGRQRGFEEEI
IRFKKELQESQFKDAEEKYKEMMIVMRTTELVNRDLDIYYKALDKAIMTFHSMKMEEINK
IIRDLWRTTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMIKGGTALDMRGRCSAGQ
KVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVELIKSRSQQRNFQLL
VITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGS
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgataagatgagcatccttggagtgaggagtttcggggtggaggacaaa
gacaagcaagttatcactttctttagtcctttaaccattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgccttaaatatatttccactggagatttccctccaggc
accaaaggaaattcatttgttcatgatccaaaggttgctcacgaaacagatgtcagagct
cagattcgactgcagtttcgtgatgttaatggagagcttgtagctgtccagcgatccatg
gtttgtactcagaaaggcaagaaaaccgaatttaaaactcttgaaggtgtcattactcga
acaaagcatggggagaaggtcagtctcagttccaagtgtgcagaaattgatcgagagatg
atcagcgcccttggtgtttccaaatccgtgattaataatgtaatattctgtcatcaagaa
gaatccaactggcccttaagtgagggaagggccctaaaacaaaaatttgatgagatcttc
tcagcaacaaggtatattaaagcactggaaacacttcgtcaggtacgtcaaaagcaaacc
ttgagagtaaaagagtgtcagatggaactgagatatctaaaacaaaataaagaaaaagca
cgtgaaattcaagatcaacttagcaatagggaagctcaactggctgcttctaaggaaaat
gtaaaatctattgagaatcaacttgagcctctaaagaaccgcctgacagaaattgaacag
aatcttgcaaaagtaatgagacttgacaatgagattaaagctctggacagcagaaaaaga
cagatggaaaaagataaccaggatttacaacagaagatgaagaaggtttttcaaggaaca
gatgaccaactaagggatatgtaccagaaccatcagagaacagtaaaagagaaggaaagg
agattaacagactgtcaacatgagctggatagagcaagcagagagtgtcagagattcaac
agagagaaatcagaattacttgttgaacaaggccgtcttcagctgcaagcagatcgtcac
caacaagacatcagaaccagggattcattaatccagactttggcagcactgttggaatta
gatggttttcagcgagcaccttttaatgaaaggcaaattaacagttttcacaagcttgtg
aaagagagacaagaaagagaagtggaagctgccagtcagttaatgagagaatttacagaa
aaagaaacaatgaaacaaaagcagattgatgatataagagataagaaaactggactggaa
aaaaccattgacctgaagtcagacattcaaaataagaaacagcttgaactgaagaatgtg
aaatatgaactgaatcagttggaggagtcttcagacaggattctggaactggatcaggaa
ctcatcaagtctgaacgtgaactagagaagactgagaagaacagcagtgttgaagctctt
gaatcagaggtacaaaaacttcaaaatgagaaagcagacgtggataaggttcttcggaaa
ttggatcaggagatggaacagctaaacttgaataccatggcaatcacccaaatggatatg
ttgaaaaaagacaaagtggacaaagaggagcagatcagaaaaataaaatctagacatact
gatcaattgaccttattgctgggatattttcctaacaaaagacagcttgaggactggctt
catgctaaaactagagagattaatcagacaagagacaagcttgctcagcttaacaaagaa
ctcgtttcagctgaacaaaataaaaatcatgtcagtattgagctaagaaaaaaagaagag
caattgtccagttatgaagacaaactttttaatgtttgtggaagtcaggattttgattgt
gatctatataaacttcaggatgaaattgaaaagacttcaaagcagcgagctatgcttgct
ggagctacagcagtttattcacaatttattacccagctgacagatgagaaccagtcatgt
tgcccagtttgtcagaggttctttgaaacagagtcagaacttcaagatgtaattagcgat
ctgcagtccaagttacgtcttgctccagataaactgaagtcaacagagtctgaacttaaa
agaagagaaaagaagcgtgatgaaatgatggcacttaaaccaatcaggcagaccataact
gaacttaaagaaaaagacataccagacttaagaaacaagctacagaatataaatagagat
attcagcgcctaaagagcgatgtagaagagcaggatactctcttaaatactgttattcct
gaggaggaaagtgccaaagcatgtttacaagacataacacttatggaaaggtaccagact
gatttaagggatgttgaacgaaaaattgcccagcagggcactaaactgcaaggagtagac
ttaggtcgaactgttctacaagtaagccaggaaaaacaagaaaaaaaacacctatgggat
acagttactggtaaaattgagctaaatcaaaaacttaaacaggaccaacagactcaaatc
cagcagctaaagagcacagtgaatgaacttaaagcagaaaagctacaaatttccagtaat
atgcagcgtcgacaacaactggaggatcagactgtagaattatccactgaagttcagtct
ttatacagagagctcaaagaagcgaaggatcagctatttcctttggaagcaacttcagaa
aaactatatctaatcaacaaaaagaacacaagtaacaaagtaacacaagagaagataaat
gagatcaaagagaaagctaaaaatatccatgactatgtgaaagtaattgagaactatatt
cagggaggaaaagaagattataaaaagcaaaaagagtctgaacttgatgaaataaaaact
caactagctgattgtgaaaaacagaaagaaaagataagtaaagagatgggaacaattaga
caagacattgatactcaaaagattcaagaaagatggctagaggataaccttacattaaga
aaaagaaatgaagagctaaaagaagttgaagaagaacgaaaacaatatatgaaggagatg
ggggaaatgaaagttccacaactaaaaaatgaacaacaatgtctggagaagaaaatagag
gatttaaaaaaaaatcacagtttggcattaggtcggcagcgtggatttgaagaagagatc
attcgatttaaaaaagagcttcaagaatctcaattcaaagatgctgaggaaaagtacaaa
gaaatgatgattgtaatgagaacaacagagctagtaaacagggaccttgacatatactac
aaggcacttgataaagcaattatgacatttcacagcatgaaaatggaagaaatcaataaa
atcattcgtgatctttggcgaaccacctacagagggcaagatattgaatatatagaaatt
cgttctgatgcagatgaaaatgtttcagcatctgataaaaggaggaactacaattataga
gtagtaatgataaaaggaggtactgctctggacatgcgaggaagatgcagtgctgggcaa
aaggtgcttgcttccctcattattcgtcttgctctggcagaaacattctgtctcaactgt
ggcattcttgcattagatgagcctactaccaatcttgatcgagaaaacatcgagtctctt
gcacatgctctggtggagttaataaaaagtcgctcacaacaacgcaactttcagcttctt
gtcataacacatgacgaagattttgtggagcttttgggccgttctgaatacgtggagaaa
ttctacaggataaagaagaatattgaccagtgttctgagatagtgaagtgcagcgtcagt
tccttaggttcctag
DBGET
integrated database retrieval system
