Pelodiscus sinensis (Chinese soft-shelled turtle): 102447969
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Entry
102447969 CDS
T02980
Symbol
VPS16
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04140
Autophagy - animal
pss04148
Efferocytosis
pss05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102447969 (VPS16)
04148 Efferocytosis
102447969 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102447969 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102447969 (VPS16)
Membrane trafficking [BR:
pss04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102447969 (VPS16)
Hops complex
102447969 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
102447969
NCBI-ProteinID:
XP_025035772
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
LLAAEKLRSSRVPRGFHCRLSPAALLKNNLRREKSPSSRPLLEIYSASGLPLASMPEVLQ
NRVREAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKLPSCWAVLSQDR
VTLILLAVGQDLYLLDSTSCSVVTPPGMSPHAGAYVQMAVSFNYRYLALLTDTGSIWMGT
ASLKVSASPPALGGLESAPWVVQGSAQPAEGSAATPLGAEPCLGASAAPGDAAAPKESQK
ADEYLRPSAPPRLAQLFRAGSRADPWRSRPQKESQKADEYLREIKDQKLLPERAASAPVY
TVVLHLKNELNRGTFFMTLQKQPVALSLYRQFCKHQELETLKDLSNQDDDHQELGNFHVH
ASYSKEQVGRRSEQRAQAFPWEPRCLRRPQGKRQGGGCLARRDGGCPGRGPSRAPSLASA
PQATEDQIKLLRMQRRLQDELDKPYVDFSLHDTVYSLILDGSHKRAEQLYRDFRIPDKRF
WWLKISALAERDDWEELEKFSKSKKSPIGYLRVDQAADAAIEHKNETELNLVLAKCTAAT
DSAVTEKIHRAKAQLLKK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ctcctggctgccgagaagctgcgctctagccgggttccccgggggtttcactgccgcttg
tcgcctgcagccttgctgaagaacaacctcaggagagagaagtcccccagctcccggccg
cttctggagatctactcggcctcaggccttcccctggccagcatgccggaggtgctgcag
aaccgcgtgcgggaggcgaaggttttccacacggagtacgggacgggcgtggccatcctc
accggggcgcaccgcttctccctcaccaccaacatcgacgacctcaagctgcgcaggatg
ccggaggtgccaggtctgcagaagctgccctcctgctgggccgtcctgtcccaggacaga
gtcaccctcatcttgctagcggtcggccaggacctgtacctcctggacagcacgtcctgc
tccgtggtgactcccccaggaatgagcccccatgctggcgcgtacgtgcagatggccgtg
tccttcaactaccgctacctggccctgctgaccgacactggctccatctggatggggacg
gcctcgctgaaggtgagcgcctccccgcccgcactcgggggtctggagtctgctccctgg
gtcgtgcagggctccgcccagccagctgagggctcggccgcgacccctctgggggcagag
ccttgcctcggtgccagtgctgctcctggggacgcggcagcgccgaaagagagccagaag
gcggacgagtacctgcgcccatcggctcctccccgcctggcgcagctcttccgtgcaggc
tcccgggctgacccctggcgctctcgcccccagaaagagagccagaaggcggacgagtac
ctgcgggagatcaaggaccagaagctgctaccggagcgcgctgcctctgccccagtgtac
accgtcgtgctgcacctcaagaacgaactgaaccgcggcaccttcttcatgacgctgcag
aagcagccggtggctctgagcctctaccgccagttctgcaagcaccaggagctggagacg
ctcaaggacctgtccaaccaggacgacgatcaccaggagctcgggaacttccacgtccac
gccagctactccaaggagcaggtgggtcggcggagtgagcagagagcccaggccttccct
tgggagccccggtgtctgcgccgccctcaggggaagcggcaggggggggggtgccttgcg
cgcagggatggcgggtgcccggggagaggcccatcccgtgcgcccagcctggcctctgct
ccacaggccacggaggatcagatcaagctgctgcggatgcagcgccgcttgcaggacgag
ttggacaagccctacgtggacttctccctgcacgacaccgtctacagcctcatcctggac
ggcagccacaagcgggcggagcagctgtaccgcgacttccgcatccccgacaagaggttc
tggtggctgaagatcagcgccctggctgagcgggacgactgggaggagctggagaagttt
tccaagagtaagaagtcgcccattgggtacttgagagtggaccaagccgccgacgctgcc
attgagcacaagaacgagacggagctgaacctcgtcctggccaagtgcaccgcagccacc
gactccgcggtcacagagaagatccaccgtgcgaaagctcagctcctgaagaagtaa
DBGET
integrated database retrieval system
