Pelodiscus sinensis (Chinese soft-shelled turtle): 102448006
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Entry
102448006 CDS
T02980
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102448006
NCBI-ProteinID:
XP_025040661
Ensembl:
ENSPSIG00000004222
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
MPYMLILLALLLSGEKIEAQRAGCKNVHYDLVFILDTSSSVGKEDFEKVRQWVSNLVDTF
EIGPDKTRVGVVRYSDRPTTEFDLGRYQTREEIKEAARNIKYYGGNTNTGDALRYINTYS
FSKEAGGRLSDPTIKKVAILLTDGRSQDYVMDAATAARKAGIRIFAVGVGEALKEELDEI
ASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTNGETDEIPGFDL
VDLFSVMEIFGRKENGIRSSYVRLGSFPIVQKTEGVFPQGLPDEYAFVATFKFRKASRRE
DWYIWQIIDKYGIPQVSIRLDGENKAVEYSSIGLTKDAVRVVFRSARVSDLFDRNWHKIA
LSIQSKSVSLYIDCKLVQTLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQRMVIYCDSR
HAELETCCDIPSGPCQVTVVTEPPPPEIRPTVGSEQVGAQNTLNCSCPAGEKGERGPTGP
EGFRGQKGESGNPGLPGLKGEKGDSGRGAYGRGEKGEQGSPGSPGPPGRDGAKGETGEPG
QPGAFGLPGPVGPKGSEGQRGPPGIKGYVGAPGLQGERGEKGTRGDKGERGLDGFPGKPG
VEGKQGLKGSTGPPGANGPQGEKGEAGLPGLPGSAVQMEGLKGEQGAPGPRGPPGVPGTP
GPAGLEGKAGVPGLQGQRGKKGEPGFPGLDGLPGPRGLAGSPGVAGPPGPPGAPGLPGEI
GVSGKTGPPGPAGLPGKDGLNGLPGLLGQKGEQGERGQDGFPGQAGPKGDAGDHGLAGEK
GETGLPGPPGLLGKKGEKGDLGEKGRDGLPGFKGERGEKGDVGPAGPPGLPGTTTLFTPR
PQIPGETGPKGEKGDRGGRGEPGPHGVPGEMGLPGPPGPQGAKGQEGARGEPGDTGPPGP
AGPPGLQGLSGNVGLPGDAGQPGKDGQKGEKGDPGKEGKPGLPGLSGEPGPAGIPGLPGK
GKDGERGERGSPGLPGLLGHKGDRGAPGLPGQPGDRGAPGVGEAGLPGPAGPAGDKGPSG
PRGLPGVPGPQGPTGQDGLPGNPGERGPPGKPGASSLLSPEDINLLVKDVCNDCPPGPPG
LPGMPGFKGDRGAQGPPGRDGLNGKMGDPGPRGLPGPPGVDGPKGTKGDRGTSGDAGEKG
GQGHPGMPGFSGPPGNPGPPGPDGKPGPARTILASLKSCLNNNPSVATLQGKDGPPGPPG
PPGLPGLQGADGKDGKPGSPGELGKPGEPGLPGQEGARGLPGFKGPRGDAGPPGPRGEPG
GTGPAGREGPPGKDGDMGPIGPQGPRGLRGQPGKNGSPGAPGEAGPAGNPGPKGNKGENG
SPGLPGFIGPRGPPGDTGEKGPSGKEGAAGKPGNHGPKGDRGDPGVKGDKGPQGEKGLPG
DPGIPGHKGHTGLMGPQGPPGDSGQAGPPGPPGQPGFPGPRGDSPSLETLRRLIQEELGK
QLDAKLAYLMAQMQPAHIKAPQGRPGPPGPPGKEGLPGRPGPSGEPGRPGQTGSEGPPGP
VGPKGERGVKGERGDTGVGQRGEIGPPGIPGLPGEPGYGKDGMPGAPGPQGEAGVPGLMG
PQGPPGANGQCDPSQCAYYASLAARPGNVKGP
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgccttacatgctgattcttcttgcactcctcctaagcggagagaaaattgaggcacag
agagcaggttgcaagaatgtccactatgaccttgtcttcatcttggatacctcttccagt
gtgggtaaagaagattttgagaaggtccgccagtgggtatctaatctggtcgataccttt
gagattggaccggacaagacccgtgtaggagtggtacgttacagcgacaggccaaccacg
gagtttgacttgggaaggtaccaaactcgtgaggaaatcaaagaagcggcaaggaacatt
aagtattatggaggcaatacaaacactggggatgcccttaggtacatcaacacctatagc
ttttccaaagaggctggtgggaggcttagtgatccaaccattaagaaagtggctatactt
ttgactgatggaagaagtcaggattatgtcatggatgcagccactgcagcccgtaaggca
ggaatcaggatctttgctgtgggagttggtgaggccttaaaggaggaactggatgaaatt
gcttctgagcctaaatctgcccatgtgttccatgtctccgattacaatgccattgataaa
atacgagggaaactgagacgacggctttgtgaaaatgtgctgtgtccaaatgtccatgta
gaaggagatcgatttaaacacaccaatggagagactgatgaaatcccagggtttgacctg
gtggatttgttcagtgtgatggagatttttggaaggaaagaaaatggaattcggagttct
tatgtgcgacttggaagcttccccatcgtgcagaaaactgagggtgtattcccacagggc
ctgcctgatgaatatgcctttgtagccaccttcaaatttcggaaggcttctaggagagaa
gactggtatatttggcagattattgacaagtacggcataccacaggtctctatccgattg
gatggggagaacaaagccgtggagtacagttccattgggctgaccaaggacgccgtgcga
gtggtctttcgaagtgcacgagtcagcgatttgtttgaccgcaactggcataagatcgcc
ctcagcattcagtccaagagcgtctccctctacattgactgcaaactcgtgcagacattg
cctattgaagacagagaaaatattgacatccaagggaagactgtgattggcaaacgcctg
tatgacagcgtgcccatagattttgatcttcagcggatggtgatttattgtgattcccga
catgctgagctggaaacctgctgtgatattccctctggaccatgtcaggtgacagtcgtc
actgaaccaccacctcctgaaataagacccactgttggcagcgaacaagtgggtgctcaa
aataccctcaactgttcctgtcctgctggagaaaagggtgagaggggtccaacaggccct
gaaggtttcagaggtcaaaagggagaaagtggcaacccaggacttcctggtctaaaagga
gaaaaaggagactcaggcagaggagcatatggcagaggagagaagggagaacagggatcc
ccaggctcgcccggcccccccgggagggatggagcgaaaggagaaactggggaaccagga
cagccaggggcctttggacttcctggtccagtgggccctaagggatctgagggacaacga
ggtccaccaggaattaaaggctacgttggagcacccggcctgcagggagaaagaggagaa
aagggaactcgaggagacaagggagaacgaggccttgatggattcccagggaagccaggt
gtagaggggaaacagggccttaagggtagcacgggccctccaggtgccaacggaccccaa
ggagaaaagggtgaagcgggtctcccaggactgccgggctctgcagtacaaatggaaggt
ctgaaaggagagcaaggggcgccaggcccacgaggccctcctggagttccagggacgccg
ggtccagctggtctggaaggcaaggcaggagttcctggtttacaaggtcaaaggggcaag
aagggtgaacctggcttcccaggactcgatggcttgcctggacctcggggtcttgccggg
tctcctggtgtcgctggccctcccggacctccaggtgctccaggattacctggagaaatt
ggtgtttctggtaaaactggaccaccaggaccagcgggattgcctggcaaggatggatta
aatggtcttcctgggcttctgggccaaaagggagaacaaggagagaggggacaggacggt
tttcctgggcaagctggtcccaagggcgatgcaggagatcacggtctagctggtgagaag
ggtgaaacaggccttcctggtcctccagggttacttgggaagaagggagagaagggagat
ctgggtgaaaaaggaagagatggactccctggattcaaaggtgaaagaggtgaaaagggc
gacgtgggccctgctggtcccccaggtttacccggaacaacaaccttgtttactccacgc
cctcagattcctggagaaactgggccgaaaggagagaaaggagatcgaggaggcagaggg
gaacctgggccgcatggtgtccctggtgagatggggctgccaggacctccaggaccacag
ggcgccaagggacaggaaggagccagaggagagccaggagatactggtcctcctggtcct
gctggacccccaggtctccaaggcttgtcaggaaacgtgggtcttcctggagatgctggc
caacctgggaaagatggacaaaagggtgaaaagggtgacccaggaaaggaaggaaaacca
ggactacctgggctgtcaggtgagcctggccctgctggaatacctggcttacccgggaag
ggtaaagacggagaacggggtgaaagaggctccccaggcttaccaggactcctcggacac
aagggagatagaggggctcctggtcttcctggacagccgggagacagaggtgcaccagga
gttggagaagctgggcttcctggccctgcgggaccagcaggagacaaagggccatcgggc
cctcgaggtttaccgggtgttccaggcccgcaggggccaactgggcaggatggtttacct
ggaaatcctggggaaagaggacctcctggaaagccaggtgcctcctccctgctttctcct
gaggacataaatctcctagtcaaggatgtgtgcaacgactgcccgcctggcccgccgggg
ctccctggaatgccaggcttcaagggtgacagaggtgcccaaggacctccgggtagagat
gggctgaatgggaaaatgggcgatcctggaccccggggtctcccaggccctccaggggtg
gatggtccaaagggcactaaaggagaccgtgggacatctggggatgctggtgaaaaaggt
ggacagggtcaccctgggatgcctggattctcgggacctcctggaaacccagggccccct
ggaccagatggcaaaccaggacctgcacgaacaatattagcttctttaaaatcttgtctg
aacaataacccatctgtggccactttacagggtaaagatggcccacctggtcccccaggc
ccaccaggactgcctggccttcagggcgctgacggcaaggatggcaagcctggatctccc
ggggaactaggcaaaccaggagaacctggactccccggccaagagggggccagagggtta
ccgggtttcaaggggcccagaggagatgcaggtcccccaggacccaggggagagccaggc
gggaccgggccggccggtcgtgagggcccaccggggaaggatggcgatatgggccccatt
ggacctcaaggtcctcgaggactcagagggcagccaggcaagaatggctcacccggtgcc
ccaggggaagctggtcctgcaggtaacccaggcccaaaaggaaacaaaggagaaaatggc
agtcctggacttcctggatttattgggcctcgaggccctccgggagacacaggagagaag
gggccttccggaaaagagggcgccgccgggaaaccaggcaaccatggacccaaaggagac
aggggagatcctggcgtcaaaggtgacaagggcccacagggagagaaaggcctgcctggg
gatcctggcatacctggccataaaggccacactggattgatgggtccccagggacctcca
ggcgacagtggacaagctggcccaccaggacctccaggacagccaggcttccccggaccc
aggggggactctccctcactggagactctgagaaggctcatccaagaagagttaggaaag
cagctagatgccaaactagcctacctcatggctcagatgcagccagcacatattaaagca
ccacaaggcagaccagggcctccggggcctcctggcaaggaaggactcccaggaagacca
ggcccatcaggagaaccaggccggcctggacagacagggtctgaaggaccccccggccca
gtgggtccaaaaggggaaagaggtgtgaagggtgagagaggagacaccggcgttggtcag
aggggtgaaattggtcctccaggaattccaggccttccaggagaacctggctatggtaaa
gatgggatgccaggtgcacctggtccacaaggagaagcaggggtgccaggcctcatgggc
ccacagggacctccgggagccaatggacagtgcgatccttctcagtgtgcttactatgca
agtctggccgcccggcctggcaatgtcaaagggccctaa
DBGET
integrated database retrieval system
