KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102448007
Entry
102448007         CDS       T02980                                 
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03018  RNA degradation
pss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102448007 (LSM5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102448007 (LSM5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pss03019]
    102448007 (LSM5)
   03041 Spliceosome [BR:pss03041]
    102448007 (LSM5)
Messenger RNA biogenesis [BR:pss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102448007 (LSM5)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     102448007 (LSM5)
Spliceosome [BR:pss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    102448007 (LSM5)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 102448007
NCBI-ProteinID: XP_006124098
LinkDB
Position
Unknown
AA seq 62 aa
MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP
EV
NT seq 189 nt   +upstreamnt  +downstreamnt
atgaagagtgataaagaaatagttggcacactcctaggatttgatgactttgtcaacatg
gtattagaggatgttacagagtttgaaatcacacctgaaggaagaagaatcacaaaatta
gatcaaattttgctaaatggaaataacataacaatgctggttcctggaggagaaggacct
gaagtgtaa

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