Pelodiscus sinensis (Chinese soft-shelled turtle): 102448220
Help
Entry
102448220 CDS
T02980
Symbol
SF3B3
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102448220 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102448220 (SF3B3)
03041 Spliceosome [BR:
pss03041
]
102448220 (SF3B3)
03036 Chromosome and associated proteins [BR:
pss03036
]
102448220 (SF3B3)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102448220 (SF3B3)
Spliceosome [BR:
pss03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102448220 (SF3B3)
Complex B
102448220 (SF3B3)
Complex C
U2 SnRNP specific factors
102448220 (SF3B3)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
102448220 (SF3B3)
TFTC complex
102448220 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
102448220
NCBI-ProteinID:
XP_025035872
Ensembl:
ENSPSIG00000002232
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKCXXXXXXXXXXXXXXXXFL
AVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPM
FACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGG
SDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFF
LAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPGAAAMCVLKTGFLFVASEFGNHYLYQI
AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTP
QLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNA
TLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGK
KTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQR
SRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSIG
FLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWL
SYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPL
QYTPRKFVIHPESSNLIVIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAA
FLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGD
DWHVLVGVAKDLILNPRSVAGGFIYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLI
GVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTVGHRVIVSDVQESFIWVRYKRNENQL
IIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGL
LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF
QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP
PEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttacaatttaacattgcagcgagccaccggcatcagctatgccatccatggc
aatttctcaggaaccaaacaacaggaaattgttgtttcccgggggaagatcctggagttg
ctccgtcccgatcccaacacagggaaagtacacaccttgctgacagtggaagtgtttgga
gtcattcgctccctcatggccttcagactgacaggtggaaccaaagactatattgttgtg
gggagtgattcaggtcgcattgttatcctggagtaccagccctccaagaacatgtttgag
aagtgtnncannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcttg
gctgtggacccaaagggccgcgctgtcatgatcagtgccatagagaaacagaagctggtg
tacatcctgaacagagacgctgccgcccggctcaccatttcttccccactggaagcccac
aaggccaacaccttggtctaccacgtggtgggagtcgatgtggggtttgaaaacccaatg
tttgcttgtctggagatggactatgaggaagcggacaatgatccaacaggagaagcagca
gccaacacccagcagaccctgacgttttatgagctggacctgggtttgaaccacgtggtt
aggaaatacagtgaacctttggaggagcacggcaacttccttataacagtgcctggcggc
tctgatggtcccagcggggtgctgatctgttctgaaaactacatcacctacaaaaacttt
ggtgaccagcctgatatcagatgtccaattcccaggagaaggaatgacttggatgatccg
gagaggggcatgatttttgtctgctctgctacgcacaagaccaagtccatgttcttcttc
ctggcccagacggagcagggagatatctttaaaatcaccctagagactgatgaagacatg
gtgacagagatccgactgaagtattttgataccgttcctggggctgctgccatgtgcgtg
ctgaaaacggggttcctctttgtggcatcggagtttggaaaccattacctttaccagata
gcccatctgggagatgacgacgaggagccggagttctcctctgccatgcctctggaggaa
ggagacactttctttttccagccacggccgctcaagaacctggtgttggtggatgagctg
gacagtctgtctccgatcttgttttgtcagatagcagatctggccaacgaagacactccc
cagctatatgtggcctgtgggcgagggcctcggtcgtctctgcgggtcctacggcatgga
cttgaggtgtcggaaatggccgtctcagagctgcccggtaaccccaacgctgtgtggacc
gtgaggaggcacattgaagatgaatttgatgcctatatcatcgtgtccttcgtaaatgcc
accctggtgctgtctatcggagagactgtagaggaagtgactgactctggcttcctgggt
accacccccactttgtcctgttccttgttgggggacgatgctttggtacaggtttatccg
gacggcatccggcacatccgagccgacaaaagggtgaacgagtggaaaacgcccggaaag
aagaccatcgtgaagtgtgccgtgaaccagagacaagtggtgatcgccctgactggagga
gaactggtctactttgagatggacccatcaggacagctgaacgagtacaccgagaggaag
gagatgtcggccgacgtggtgtgcatgagcttggccaacgttcctcctggggagcagcgc
tcccgcttccttgccgtggggctggtggacaacaccgtccgaattatctccctggacccc
tcggattgcttacagcccctgagtatgcaggccctccctgctcagccagaatcgctgtgc
atcgtggagatgggaggggcagaaaaacaggatgagctgggggagcggggctccattggt
ttcctgtacctgaacatcggattacagaacggcgtgctgctgcggacggtcttggatcca
gtcactggagatctgtctgataccaggacccggtaccttggctcccgccccgtgaaactc
ttccgagtccgaatgcaaggccaagaggcggtgctggccatgtccagtcgctcctggctg
agttactcttaccagtcccgcttccatctaacccccctgtcctacgagacgctcgagttt
gcatctggcttcgcatctgagcagtgtccagagggcattgttgctatctccacaaacaca
ctgaggattttggcgttggaaaagctgggggcagtcttcaaccaggtcgccttcccgctg
cagtacaccccccggaagttcgtcattcaccccgagagcagcaacctgatcgtcatcgag
acggaccacaacgcttacaccgaggccacgaaagcccagcggaagcagcagatggctgag
gaaatggtggaggcagccggggaggacgagcgggagctggccgcggagatggcggccgcc
tttctgaacgagaatctccccgagtccatctttggtgcccccaaagccggcaacggccag
tgggcctcggtcgtccgagtgatgaaccccatccagggcaacacgctagatctggtgcag
ctggagcagaacgaagctgccttcagcgtggccgtgtgccgattctccaacactggggat
gactggcatgtgctggtgggagtggccaaggacctgattctgaacccccggtcggtggcc
ggcgggtttatctacacgtacaagctggtgaatagtggtgagaagctggagttcctacac
aagacccccgtcgaagaggtgcctgctgccatcgccccattccagggccgagtcttaatt
ggagttgggaagctcttgcgtgtgtacgacctgggcaagaagaagctgcttcggaagtgt
gagaacaagcacatcgccaactacatctccggcatccagaccgtcgggcaccgcgtgatc
gtgtcggacgtccaggagagcttcatttgggtgcgctacaagaggaacgagaaccagctg
atcatctttgccgacgacacctacccgcgctgggtcaccaccgccaccctcctcgactac
gacaccgtggcaggcgctgacaagttcggcaacatctgtgtggtgaggctgcctcccaac
accaacgacgaggtcgacgaggacccgacgggcaacaaggccttgtgggaccgggggctt
ctcaatggcgcctcgcagaaggcggaggtgatcatgaactaccacgtgggggaaacggtg
ctgtccttgcagaagaccacactgatcccgggcgggtctgagtctctcgtctacaccacc
ctgtcggggggcattggcatcctggtccccttcacgtcccacgaggatcacgacttcttc
cagcacgtggagatgcacctgaggtcggagcatccccctctctgtgggcgggaccacctg
agcttccgctcctactacttcccagtgaagaacgtgatcgacggggacctttgtgagcag
ttcaactccatggagcccaacaagcagaagaacgtctcagaggagctggacaggaccccc
ccggaggtgtccaagaagctggaggacatccgcacgcgctacgccttctga
DBGET
integrated database retrieval system
