Pelodiscus sinensis (Chinese soft-shelled turtle): 102448353
Help
Entry
102448353 CDS
T02980
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102448353 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102448353 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pss03036
]
102448353 (SMARCA2)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102448353 (SMARCA2)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102448353 (SMARCA2)
Chromatin remodeling factors
BAF complex
102448353 (SMARCA2)
PBAF complex
102448353 (SMARCA2)
GBAF(ncBAF) complex
102448353 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102448353
NCBI-ProteinID:
XP_025043913
Ensembl:
ENSPSIG00000006284
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMSSM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDMHCSSMKSASLRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPHMPPSQPAPMIPGDSQVISQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQAPANYSRPPVLGIGVHSITGP
ATGPGPASGVPGHAAAMTPKSWTEGQGPDMNVATTPQKLAVPPPSGRPSPAPPAAQPSAA
MPGPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQEL
ENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ
TLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA
TWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT
NLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSDLGPDGEPIDESSQMSDLPVKVTHTE
TGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEEESDSEYEEEDDDEESSRLEADEKI
LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSSYYTVAHAISERVEKQSALL
INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII
VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI
LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP
EKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHP
YMFQHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLM
TIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPASQFFIFLLSTRAGGLGLNLQAAD
TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI
QAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMD
RRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDA
LTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEEGEKAKKRRGRPPAEKLSPN
PPKLTKQMNAIIDTVINYKDSSSGKLCMDIIVMEDRYFYLIGNRSKEKTKNGYLEITLKN
TSWESMINII
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccaacagatccgggcgcaatgcctcatcctggcccttctccagggccaggg
ccatcacctggaccaattctaggacctagtccaggaccaggaccctctcctggttcagta
cacagcatgatgggaccgagtcctggacccccgagtgtcccacatcctatgtctagcatg
gggcccactgactatccacaggagggcatgcaccaaatgcacaagtctattgatggcttg
catgaaaaaggaatggttgaagacatgcattgtagctccatgaagagtgcaagtttgaga
ccacctcaccctggaatgggcccaccgcagagtccaatggaccagcatagccaaggttat
atgtctcctcatccatctcctttgggagcacctgaacatgtgtccagcccaatgtctgga
ggaggcccaactccacctcatatgccaccaagtcagccagcacccatgatacccggagac
tcgcaggttataagccagcccagcagaggtccttcaccttttagccctgtccagctgcac
cagctccgggctcaaattctagcttacaaaatgttagctcgaggccagcctttacctgaa
aacctgcaacttgctgttcaagggaagaggacgctgcctgggattcaacagcaacaggct
cctgctaactacagcagaccacctgttctaggtattggggtgcattcaattactggtccc
gcaactgggccaggacctgcttcaggagtgccaggacatgcagctgccatgaccccgaaa
tcttggacagaaggtcaaggaccagatatgaatgttgccactacaccacaaaagcttgct
gtaccacctcctagtggaaggccttcacctgccccccctgctgcccagccttctgcagcc
atgcctggtccttctgtaccacagccaactccggggcagccatcacctattgtccagctg
cagcaaaaacagaaccgtattagccccatacagaaaccacaaggattggatcctgttgaa
atactccaggagcgtgaatacagacttcaggctcgaattgctcacagaatccaggaactg
gagaatttacctggctctttgcctcctgatctgcgaaccaaagctacagttgagctaaag
gcacttaggttactgaattttcagcgtcagctaagacaagaggtcgtggcctgcatgcgt
cgtgacacaacactggagacagcactgaactccaaagcttacaaacgcagcaagcgccag
actctgagggaagcccgcatgacagaaaagcttgagaaacagcagaaaatagaacaggag
agaaaacgcagacagaagcaccaggaatatctgaacagcatattgcagcatgctaaagat
tttaaagaataccaccggtctgtggctgggaaaattcagaaactttctaaagctgtggca
acttggcatgccaacactgaacgtgagcagaagaaagaaactgagcgaattgagaaagaa
agaatgagaaggctgatggctgaagatgaagaaggctaccgtaagttgattgaccagaag
aaagatagacgtctagcatacctgctgcagcagacagatgaatatgtggccaatctgact
aatctggtgtgggagcacaagcaagcacaagctgccaaagagaagaaaaagaggaggaga
agaaagaagaaggcagaagagaatgcggagggaatgggatctgatcttggccctgacgga
gagcccattgatgagagcagtcagatgagtgaccttccagtcaaagtaactcacactgaa
acaggcaaagttcttcttgggccagaagctccaaaagcaagtcagctggatgcttggtta
gaaatgaatcctggctatgaagtggcgcctagatcagatagtgaggaggagagtgactct
gaatatgaggaggaggatgatgatgaggaatcaagtagactagaagcagatgaaaaaata
ctcctggatccaaacagtgaagaggtttctgaaaaagatgctaagcagatcattgagaca
gccaaacaagatgtggatgatgaatacagtatgcaatatagtgctagagggtctcagtcc
tcctactatacagttgctcatgcaatctcagagagggtggagaaacagtctgctcttctt
attaatggaacactaaaacattatcagctccaaggcctggaatggatggtttcactttat
aataacaatttgaatggaattttagctgatgaaatgggtctaggaaagaccatacagact
attgcactcatcacttatctgatggagcacaaaagactcaatggcccctatctcatcatt
gttcccctttcgactttatccaactggacatatgaatttgacaaatgggctccttctgtg
gtgaaaatttcttacaagggtacacctgccatgcgtcgttcacttgttcctcagcttcga
agtggaaaatttaatgttcttttaactacttatgagtacataataaaggacaaacacatt
cttgctaagattcgatggaagtatatgatagtagatgaaggccatcgaatgaagaaccat
cactgcaagctgactcaggtcttgaacacccactacgtggcccctagacggattctgttg
actgggacaccattgcagaacaagttgcctgaactttgggctctccttaacttcctcctc
cccaccattttcaagagctgcagcacctttgaacagtggtttaatgctccatttgccatg
actggagaaagggtggacttaaatgaagaagagactattttgatcatcagacgtctccac
aaagtgttacggcctttcttgctgaggagattgaagaaagaggttgaatctcaactgcca
gaaaaggttgaatatgtgatcaaatgtgatatgtctgctcttcagaagattctctaccgc
catatgcaagcaaaaggaatcctcctcacagatggctctgagaaagacaagaagggaaaa
ggtggagcaaaaactcttatgaacactatcatgcaattgagaaagatatgcaatcaccca
tatatgtttcagcatattgaggagtcctttgctgaacacttgggctattcaagtggtgtt
atcaatggagccgagctttatcgggcctcagggaagtttgaattacttgatcgtattcta
ccaaagttgcgagccactaatcaccgtgtgcttctcttctgtcaaatgacatccctcatg
accattatggaagactattttgcttttcgaaatttcctttatcttcgccttgatggtaca
acaaaatcagaagatcgtgctgctttgctgaagaagttcaatgaacctgcatcacagttc
tttatcttcttgttgagcacaagggcaggaggcctgggcctgaatcttcaggctgctgat
actgtcattatctttgacagtgactggaatcctcaccaggatttgcaggcacaagacaga
gctcaccgaattggtcagcagaatgaggttcgagtcctgaggctgtgcactgtaaatagt
gtggaggagaagatacttgctgctgccaaatataaactgaacgtggatcagaaagttatt
caggctggcatgttcgatcagaaatcttcaagccatgaacggagggctttcctacaagct
atattggaacacgaggaagaaaatgaggaagaagatgaagttcctgatgacgagactctg
aatcagatgattgcgcgacgtgaagaggagtttgatctcttcatgcgtatggacatggat
cgccgcagagaagatgcccgaaatcctaagcgcaagcctcgcttgatggaggaggatgag
cttccctcttggattattaaagacgatgctgaagtagagaggctcacatgtgaggaagaa
gaagaaaaaatatttgggagagggtctcgtcagcgcagggatgtggactacagcgatgct
ctcacagagaaacagtggctcagggcaatcgaagacggcaatttggaagaaatggaagag
gaagtccggcttaaaaaacgaaagagacgaagaaatgtggataaggattctgggaaggaa
gaaggtgagaaggcaaagaagagaagaggcagacctcctgcagaaaaattgtcacccaac
ccacctaaactgacaaaacagatgaacgccattatcgatactgtgataaactacaaggac
agttcaagtgggaaactctgcatggacataattgtcatggaagacaggtacttttatttg
attgggaacagatcgaaggaaaaaactaaaaatggttatttagaaatcactttgaaaaac
acttcatgggaatctatgataaatatcatttaa
DBGET
integrated database retrieval system
