Pelodiscus sinensis (Chinese soft-shelled turtle): 102448897
Help
Entry
102448897 CDS
T02980
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102448897 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102448897 (TAF4)
03036 Chromosome and associated proteins [BR:
pss03036
]
102448897 (TAF4)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102448897 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
102448897 (TAF4)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102448897 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
102448897
NCBI-ProteinID:
XP_006126225
Ensembl:
ENSPSIG00000013059
UniProt:
K7G2Y7
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRTAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANVQTESSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQSSALDGATTTSTTTAAAAGGGGSEAAAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHSGSTSFSGTPATANPAAAPTVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLSTAVSSTSSPSPTVISSQPSPSIVGAGPTVALVRPPIHTAGPTVAAAAAA
TQNGSNTVINSAISVGVGSFPAVAAVTVGSGVSLQTPLVNSQPGSSVPAAPTTQVIKSES
PKTIVHAVSQQQTLVASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAK
GTTSTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQAPQNPTNIQNFQLPPGMVLVRSEN
GQLLMIPQQALAQMQAHAQSQPQNTMTPRPATPTSAPPVQISTVPAPGTPIIARQVTPTT
IIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTALGTATAVQSGTPQRTVQGATAT
STAATETMENVKKCKNFLSTLIKLASSGKQSSETTANVKELVQNLLDGKIEAEDFTSRLY
RELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSSSVQR
TAGKATATVTSTLQQPVISLTQPTQVGVGKQGQPTPLVIQQSQKAGALIRPPQVTLTQTP
MVALRQPHNRIMLTTPQQIQLNQLQTVPVVKPTVLPGNKALSTVSAQAAAAQKNKLKEPG
GGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPASLQRRILE
IGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNISYKDDERYEQASDVRAQL
KFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDA
NLTALAAIGPRKKRKVDSPGSGSGTEGSSTSTAVPGSSGVGTTRQFTRQRITRVNLRDLI
FCLENERETSHSLLLYKAFLK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctcgagtcccagctggcggcctccggccatcaccac
cagcaccacaaggcgcaggagcccctcaggaccgctggggggctgctggggaaccatgtt
gtgagcagcagtagcagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgtccaaacagagagcagcagcagcagcaagatgggactcagtgcccca
gagatcacaaaagcaggggctggaggagtgcaagggggtgttattaatcataacaccagg
tcccagagttcagctctggatggagccactacaaccagcaccaccactgctgcagcagca
ggaggaggcggatctgaagctgctgctgctccagggaccctcagtcagggcaaatctgtg
gttatcagtacaatggcaactgccttatccaccaggaatggcaaaattgggaccacaacg
gtgcagactttgaatgggagtaatgtggtgatgaactctcaccattcgggaagtacttct
ttctctgggactcctgcaactgctaatcctgctgctgcacctactgttgcccctctagtt
aacaatggacctggatctgtggggaaaggaaatacagttaatgctgttttgccttcagct
tctaacactgtcatccagacttctttcctcagcaccgctgtgtcctccacctcatcccca
tcccccacagtaatctcttcacagccgtcaccaagcattgtaggtgcggggcctactgta
gcactggtgagaccaccaattcacacagcaggacccacggttgctgcagctgctgcagcc
actcagaatgggagcaatactgtgatcaattcagccatcagtgtgggtgtagggagtttt
cctgctgttgctgcagtcactgtgggctctggagtttccctccaaacaccacttgtgaac
agtcaacctggttccagtgtgccagcagcacccactacacaggtcatcaaatcagagtct
cctaaaactatagtgcatgcagtatcccagcagcagacactagttgctagtggccagccc
agtactacagggggtaacatgataattgggcaaactatgcaagctgggctctccaatgtg
gctcccaatcctggagggatacctccagcagctcctggtacccctacaggaatggctaag
ggcactaccagtacagtggcacaaagtttgccaaggactccaacagcaactacaagtggt
atcagagcaactttgactcctacagttttagcaccacgtctgcctcaggcacctcagaat
ccaactaatattcagaactttcaattaccaccaggcatggtcttggtacgtagcgaaaat
ggacagttactgatgatccctcaacaagccttggcacaaatgcaggcacatgcccagtcc
cagcctcaaaataccatgactcctcgtcctgcaacacctaccagtgcccccccagtacag
atatcaacagtgccggctcctggaacacctataattgcacggcaggtgacaccaactact
ataatcaagcaggtgtctcaggctcagacaactgtacagcctacgacaacattacagcgt
cctcctgtagtgcagcctcagatagttctgggtggtaccgcacaaacaacagcattagga
acagcgacagcagtacagagtggaactcctcagagaactgtgcaaggagcaacagcaacc
tccactgctgccacagaaactatggagaatgtgaagaaatgcaagaattttctatctaca
ttaataaaactggcttcatctggaaaacagtcttcagagactacagctaatgtgaaagag
ctagtacaaaacttgttggatggaaaaattgaagcagaagactttaccagtaggctgtac
cgagaacttaattcttcaccgcaaccttatcttgtgcctttcctgaagaggagtttacct
gccttgagacagttaaccccagactcagcagcttttattcagcaaagtcaacagcagcag
cccacaacgcaagcaacaactgcgctgacagcagtgatgctgagcagctcagttcagcgc
acagcaggaaaggccactgccactgtaacaagtactctccagcagcctgtaattagtcta
actcagcctacgcaagttggggttggcaaacaagggcaacctacaccactggttatccaa
cagtctcaaaaagcaggggcattgataaggcctccacaggtaacattgacacagacccct
atggtagcgttgcggcaaccacataatcgtattatgcttacaactcctcaacaaattcag
ctgaaccaacttcagacagtacctgtggtaaaaccaacagtattacctggaaacaaagct
ctgtccactgtttcagcacaagcagctgctgctcaaaagaataaactgaaagaacctggg
ggaggttctttcagggatgatgatgatattaatgatgtggcgtcaatggctggggtcaac
ctatcagaagagagtgcccggattttggcaacaaattctgagttagtgggcacattaaca
aggtcctgtaaagacgaaacgttcctgcttccagcatctttgcaaagaaggatactagaa
ataggtaaaaaacatggaataacggaaatccatcccgatgtagttagttatgtatcacat
gcaacacaacaaaggttacaaaaccttgtagaaaaagtatcggagactgcccaacaaaag
aatatttcttataaggatgatgaaagatatgagcaagcaagtgatgttcgggcacagctc
aagttctttgaacaacttgatcaaatagaaaaacagagaaaagatgaacaagaaagggaa
atcttaatgcgcgcagcaaagtctcggtctagacaagaagacccagaacagcttagattg
aaacagaaggccaaggagatgcagcaacaagagctagcacaaatgagacagagggatgcc
aacttaactgcgttagctgcaattggtcccagaaagaaaagaaaagtggattctccagga
tctggatcagggacagagggatccagtacaagtacagcggtcccaggcagctctggagtt
ggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctcata
ttttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagcattcctt
aagtaa
DBGET
integrated database retrieval system
