Pelodiscus sinensis (Chinese soft-shelled turtle): 102449047
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Entry
102449047 CDS
T02980
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102449047 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102449047 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102449047 (SNF8)
Membrane trafficking [BR:
pss04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102449047 (SNF8)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102449047 (SNF8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
EutK_C
RPA_interact_C
Plasmid_RAQPRD
Activator-TraM
DUF4896
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
102449047
NCBI-ProteinID:
XP_075767751
Ensembl:
ENSPSIG00000005459
LinkDB
All DBs
Position
29:complement(14381172..14389707)
Genome browser
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKRKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKVLGNGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKKGYVTISEIKSSLKWELERAKQVLEHLLKEGMAWLDMQAPGEAQYWLPALF
TELYSQEITPEEAKEAIP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgccggggggtgggcgcgggcgccatcgccaagcggaagctggcggaggccaaa
tacaaggagcgagggacagttctggctgaagaccagctggctcagatgtctaagcaactg
gacatgtttaagaccaacttggaagaatttgccagcaaacacaagcaagagattcgtaaa
aatccccagtttcgggtccagttccaggacatgtgtgccacaatcggcgtggatccattg
gcctctggtaaaggattctggtcagagatgctgggagttggagacttctactatgagctg
ggcgttcagattattgaagtttgcctggctctgaagcacagaaacggagggctcataaca
ctggaagaacttcatcagcaagtgctgaagggaagggggaagtttgcccaggacgtcagc
caggacgatctcatccgagccatcaagaagctgaaagttctgggtaatggctttgggatc
attcccgtcggtgggacatacctgatccagtctgtaccagccgaactgaacatggatcac
acggtggttttgcagctggctgagaaaaagggctatgtaaccatcagtgagatcaagtcc
agtttaaagtgggagctcgaacgtgccaagcaggtgctggaacacctgctgaaggaaggc
atggcctggctcgacatgcaagccccaggggaggcccagtactggctgcctgctctcttt
actgaactttactcccaggaaatcacgccagaggaagcaaaggaggccataccctga
DBGET
integrated database retrieval system
