Pelodiscus sinensis (Chinese soft-shelled turtle): 102449106
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Entry
102449106 CDS
T02980
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102449106 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102449106 (SPATA13)
Membrane trafficking [BR:
pss04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102449106 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
SH3_1
SH3_9
SH3_2
PH_5
ZIP4_domain
Motif
Other DBs
NCBI-GeneID:
102449106
NCBI-ProteinID:
XP_006138943
Ensembl:
ENSPSIG00000008854
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSLTWKAVQSGELSSHSTCENKARRGAADEVLGHRATEED
DSVGLRCNTLCPHVFSTEDMTTLQNGCGTDTAVTCIVMDNKEPRNITSNGGCSSNNSAEE
EIQDDKLSPSKVMRFFATPRKRTTSNSERPHSLIVMGNSSTWNALSSIRKMGSFKKLKSS
VLQGIQARESSDVLNESPIGKHVSNGAALRVQTNRYSYSEPLHDFHNAVDGLASDCSDVE
ESDDSFLRNTHRSRSIRRAYGVGRINLLDADKIQSQQNCTRPTSPVTQEPKFCEIVVKDS
ENNRIIYRRSKSTDSLNFLKKSSFKRKSTSNLTDLKAASEKQVPQRTVSTSSADSDKASG
NPERRSKRWKSPIRAKDFDRVLKLVTNVTDVAWKKDGSKSQTPSLNEQNQRTRPNSRLHD
DYSRRVSSSTENDRRRCISPAHSPDSTFSGTPRLHSPVSQDTDSESNVFTDEANSLRTLS
CVLDAVSSSLAFNNLSALPNEVFYEDSTEPKSTSQFTGEFEQPSIPLRPTAPKPQSPSAE
KVQCNVNFHCPDHHSTLSLSSMESEERIELPAPKLGRNPVCFQDSVQTAYYDDGNEDSGI
SSHSQLSLNLASGAEEKKEEVIIDDQWKMSSSQDEERTDAQKFTPRRWGSGKRSRPRPLS
DYGQLAIRSFSIPEDSVAMESRKTDCVDGESQVGVASVETTVQISTVGHQRGRKRRPISV
IGGVSFYGNSQTEEIEDLLTQPITRPPVPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVG
RRRQMRASNVVTDGGTESSALADDNGSEEDYSYEELCQASPRYLQPGGEQLAINELICDG
SMVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQ
EELPENCGSTQDEEQHVDRQKNAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCR
KHTGMFTVAQLNTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIY
SEYCNNHPSACIELSNLMKHGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLA
ELLKYTTEEHSDYNNIQAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGQDVLA
RSSELIHSGELTKISKQGKSQQRIFFLFDHQLVFCKKDLLRRDMLYYKGRLDMDEMELVD
IEDGKDKDFNINVKNAFKTVNRATQEVHLFCAKKQEDKKRWLEACENERRRVQEDKEMGM
EISENQKKQAMQNARKSRHGKIKGISYNGCPMPPLHQSLHPIHQRHITVPTSIPQQQVFA
LAEPKRKPSLFWHTFNKLTPFKK
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagtcacgttcaacgtagtgacggagaaagttactttcaccttggcagcctgc
ccctccctcacgtggaaggcagttcagtctggagagctcagttcacacagtacatgtgaa
aacaaggcaagaagaggtgcagcagatgaggtgctgggacatagagcaactgaggaagat
gatagcgtgggtctgagatgtaacaccctttgccctcatgttttcagtactgaggacatg
acaacattgcagaatggctgtggaactgacaccgctgttacctgtatagtaatggataac
aaagaacccagaaatataactagcaatggggggtgcagtagcaacaacagtgctgaagag
gaaatacaagatgacaaactcagcccttcaaaagtcatgcgcttttttgctacccctcgg
aaacgaactacctccaactcagaaaggcctcattctctgattgtgatgggcaactcatca
acgtggaatgctttgtcttccattagaaaaatgggatctttcaagaagctaaaatcttca
gttcttcaaggaattcaggccagggaaagctcagatgtcttaaatgagagccctattgga
aaacatgtctccaatggcgcagcattaagagttcagactaaccggtattcctattcagag
cctttacatgatttccataatgcagtggatggtttggcttctgattgctctgatgtagag
gaaagtgatgattcctttctaaggaatactcaccgatcacgcagcatcagacgtgcttat
ggtgtgggccgcataaatttgctagatgctgataaaattcagagtcagcagaactgcacc
aggccaacttctccggtcacccaggagccaaagttctgtgaaatagtagtgaaagactct
gaaaacaacaggattatctacaggagaagcaaaagcacagatagcttaaactttctgaaa
aagagctcattcaaacgaaagtccacctcaaatctcactgacctgaaagctgcaagtgaa
aagcaagtgccacaaaggacagtaagcacctcttctgctgactcagacaaagccagtgga
aacccagagagacggtcaaaacgctggaagagccctatccgagcaaaggattttgacaga
gttttgaaacttgtaactaatgttacagatgttgcatggaagaaagatggttcaaagagc
cagactccttctctgaatgaacaaaaccagagaacaaggccaaacagcagattacatgac
gactactcccgcagggtttccagtagcactgaaaatgacagacggcggtgcatttcccct
gcacatagtccggattctaccttttctgggaccccgcgtctccatagtccagtttctcag
gatacagacagtgaatcaaatgtatttactgatgaagccaacagtctcaggactctatcg
tgtgtcttagatgctgttagttcatcacttgcttttaacaaccttagtgcacttcctaat
gaagtgttttatgaagactccactgaaccaaaaagtaccagccagtttacaggtgaattt
gaacagcctagcattcctcttaggcctactgcccctaaacctcagagccccagtgctgag
aaagtccagtgcaatgttaatttccattgtccagatcatcacagcacattgtcactgagc
tcaatggaaagtgaggaaagaattgagttacctgctccaaaattggggagaaatcctgtt
tgcttccaggactcagtgcaaactgcttactatgatgatggaaatgaagacagtggcata
agcagccactctcagcttagcctcaatttagcttctggtgctgaagaaaagaaggaagag
gttattattgatgaccagtggaagatgtcctcatcccaggatgaagaaaggacagatgca
caaaagttcactcccaggagatggggctctggaaaaagatctcggccaagaccactttca
gactatggtcagttggcaatcaggagtttctctataccagaagattcagttgcaatggag
tctcggaaaacagactgtgtagatggtgaaagtcaggttggagtggcttctgtggagact
acagtccaaatcagtacagtaggtcaccaaagagggcgaaaacgaagacctatctctgta
ataggtggggtcagtttctatgggaacagccagactgaagaaatagaagatctgctgaca
caaccaataacacggccaccagttccagcccaccaagtcccgccatataaagctgtttca
gccagattccgacccttcaccttttcacaaagcactcccattggcctggatcgagtggga
cgcaggcggcaaatgagagcatctaatgttgttacagatgggggaactgaatcttctgcc
ttagctgatgacaatggcagtgaggaggattacagttatgaggaactctgccaagccagc
cctagatacctacagcctggaggggaacagctagcaattaatgaactgatatgtgatggc
agcatggtctatgctgaagcactgtgggaccatgtgactatggatgatcaagagctaggc
tttaaagctggggatgtcatcagagtccttgaagcttccaacaaggactggtggtgggga
agaaatgaagacaaggaagcctggtttccagctagctttgtcaggttacgagttaatcag
gaagaactaccagaaaattgtggtagcacccaggatgaagagcaacatgtagatcgccaa
aaaaatgctgaaaacaaggatcagatgagaaccaatgttatacaggaaataatgaacaca
gagagagtctacatcaaacatctcaaggacatctgtgagggatatattcgacagtgtcgg
aaacacacaggaatgttcaccgtggctcagttaaacaccatttttggaaacattgaagat
atttacaaattccaaagaaagttcctcaaagatcttgagaaacagtacaacaaagaggaa
cctcatttaagtgaaataggatcctgctttcttcaacaccaagaaggttttgccatctac
tcagagtattgtaacaatcatcccagtgcctgcatcgagctttccaatctaatgaaacat
ggcaaataccgtcacttctttgaggcctgccgcctgcttcagcagatgattgatattgct
attgatggctttctccttacacctgttcagaagatctgtaaataccctcttcagcttgca
gaattactcaaatacaccactgaagagcacagtgattataacaatatacaggcagcatat
gaggccatgaagaatgtagcatgcctgatcaacgagcgcaaacgaaggctggaaagcata
gacaagattgcacgctggcaagtgtctattgttgactgggaggggcaggatgttttagcc
agaagctcagaattgattcactcgggtgagctgaccaaaatctcaaagcaaggcaaaagc
cagcaaaggatttttttcctttttgaccatcagcttgtgttttgtaagaaggacctgctg
agaagggacatgttatactataagggtcggcttgatatggatgaaatggaacttgtggac
atagaggatggcaaagataaggacttcaacattaatgtcaagaatgctttcaaaactgtg
aatagagcaacacaagaggttcatttgttttgtgcaaaaaaacaagaggataagaaaaga
tggttggaggcatgtgaaaatgaaagaagaagagtgcaggaagacaaagaaatgggaatg
gaaatctcagaaaatcaaaagaaacaagccatgcaaaatgccagaaagtcaaggcatgga
aaaattaaaggtataagttataatggatgtccgatgccccctctacaccagagtttacat
ccaattcatcaacgccacatcactgtgcccaccagcattccacagcagcaggtctttgct
ctggcagagcccaaacgaaagccatcccttttctggcacaccttcaacaaacttacccca
ttcaagaaatga
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