Pelodiscus sinensis (Chinese soft-shelled turtle): 102449176
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Entry
102449176 CDS
T02980
Symbol
HFM1
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102449176 (HFM1)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102449176 (HFM1)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102449176 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
102449176
NCBI-ProteinID:
XP_025034384
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MLNPTATVFSLDNLFFERPDENQKYLEHEEPKNWYLAPAPSVTEIAATQELQKELEKNNY
LDGKEVKVQSFPDASKTFGMEGTIETNVEVLRAVTEIPAQFRSIFKEFPYFNYIQSKVLD
DILYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKTVYMAPIKALCSQRFDDW
KDKFGRIGLSCKELTGDTVMDDLFEIQHAHIILTTPEKWDSMTRKWRDNSLVQLVRLFLI
DEVHAVKDESRGATLEVVVSRMKTVKSSLSRISENPDPLPPMRFGAVSATIPNAEDIAEW
LSDGKRPAVCLKIDESHRPVKLRKIVLGFPXQTDFKFDLTLNYKIASVIQTYSEQKPTLV
FCATRKGVQQAASVIAKDAKFVMTIEQKQRLQKCANSTKDTKLRDLLMYGVAYHHAGMEI
SDRKIIEGAFTMGILPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGMFQEYSETDILQMI
GRAGRPQFDTTATAVIMTRLSMRQKYVQMLNGADTIESSLHKHLVEHLNAEIVLHTITDV
TIALEWIRSTFLYIRVLKNPVHYGFSPGLDRVGIEAKLQELCLKNLNSLSSLDLIKMDEE
FNFKPTETGKLMAWYYIAFDTVKQFSTINGTESLSELITMISSCVEFSDVKLRTSEKKIL
NTLNKDKNRITIRFPMEGKIKTRDMKVNCLIQAQLGCIPIQDFTLTQDIGKIFRNGLRVT
KWLSEFLTSCKNNFSALLNSLILAKCFRCKLWENSLHVSKQLEKIGVTLSNAMVNAGLTS
FKKIEDANARELELIVNRHPPFGNQIKESVLHLPKYALAIEQLAKYCDTVAEILVTITLT
NFKQLQIKRTAPDCHYVTLIIGDADNQVAFKQKIMDSVLLKNGNWTKKIEVKRALKSEEL
SIHLISSEYVGVDIQQNYTAFYIGPKKFGNEVVLQRKLEAESSPDIYHAFSKAAAAARKA
PGGTCNRGITYMKLGNRECSHHCKNKDVCGHDCCKIGVSQKSELKRDSKFSSYLTDLRNR
NSTSSVPPVKRLKMQMQLNKSQNVDLKQFVFTPKSLLPTLPRSNYAQSSDSNSLEHWNNV
NILGRPPSQLQSESYEKNNFTWKQSVTVSKESYQMMTSKKNLKESLMNNLTDADKSSSWF
SESLNVNFELGDEVWNDFDDDRLIHASSFFTGMESREDLGSGNTSLENIIERKPLFQNSE
SKVTSDISKTFCMLQDKPDVHLQNSTFSTLNAPSEMQLFTQYGNIKTFSFQERTHRNLPQ
ELKNIEVPPSSEIISGSSQFIGKGNFFICNKERKKEIDVRYLSDDETNDVKPFLGIFDGI
F
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcctacagccactgtcttctcattggataatttattttttgaaagaccagat
gaaaatcaaaaatatttagaacatgaagagccaaaaaattggtatcttgcacctgctcca
tctgttactgaaattgcagccactcaggagttacagaaggaattggaaaaaaataactat
ctagatggaaaagaagttaaagtacagtcatttcctgatgcttcaaagacttttggtatg
gaaggaactatagaaacaaatgttgaggttttgagagctgttacagaaatccctgctcag
tttagaagtattttcaaggaattcccatattttaactacatacagtccaaggttttggat
gatattctttacactgataggaattttgtgatttgtgctccgactggttctggaaaaact
gtaatgttcgaactagctattactaggttactaatggaagtgccgatgccttggctaaat
attaaaactgtctatatggctccaataaaagctctgtgcagtcagcgttttgatgattgg
aaagataaatttggacgtatagggctcagctgtaaagagctgacaggagatacagtgatg
gatgatttatttgaaatacaacatgcacatattattttgaccacgccagaaaaatgggat
agcatgactagaaaatggagagataactctttagtccaactggtacgactgttcctcatt
gatgaggtgcatgctgtgaaagatgaaagccgtggtgcaacacttgaggttgtagtcagt
cggatgaagactgtaaagtcgtccctttcacgtatctcagaaaatcctgacccacttcct
cccatgagatttggagctgtttctgcaacaatcccaaatgctgaggatattgcagaatgg
ctttcagatggtaagaggcctgctgtatgtctgaaaatagatgaaagtcatcgacctgtg
aagcttcgcaaaatagttcttggatttcccnaccaaactgatttcaaatttgacttaact
cttaactataaaatagctagtgttatacaaacatactctgaacaaaaaccaacacttgtg
ttttgtgccacaaggaaaggagtacagcaggctgcttcagttattgcaaaagatgctaaa
tttgttatgactattgaacagaaacaaagattacaaaagtgtgcaaattcaactaaagat
accaaattgagagatcttctaatgtatggtgtggcttatcatcatgctggcatggagata
tctgatagaaaaataattgaaggagcttttaccatgggaatcttaccagtactttttact
acgagtaccttagctatgggagtaaatttacctgcacacctggtagttataaaatctaca
atgcactatgttggaggaatgtttcaagagtacagtgaaacagatattctgcaaatgatt
gggagagcaggaaggcctcaatttgacactacagctacagcagttatcatgactaggtta
agtatgagacagaaatatgtgcagatgttaaatggtgcagatacaatagaaagcagtttg
cacaaacatcttgttgagcatttaaatgcagaaatagtgttgcacaccatcacggatgtg
acaatagctttggaatggatacgatcaactttcctgtacatcagagttttgaaaaatcca
gttcattatggtttttcacctggattagacagagttggaattgaagcaaaattacaagaa
ttgtgtttgaagaatttgaacagtttatcatctcttgatttaatcaagatggatgaagaa
tttaatttcaaaccaacagagactggaaaactaatggcttggtattatattgcatttgat
acagtgaaacagttttccacaattaatggaacagaatctttatctgaactgatcacaatg
atatccagctgcgttgaattttcagatgtcaagttaagaacgagtgagaagaaaatatta
aacactttgaataaagacaagaacaggataactattaggtttccaatggaagggaagata
aaaacaagagacatgaaagtaaactgtcttattcaggctcaattaggatgcattcctatt
caggacttcactttgacacaagatataggcaaaattttcagaaatggcttaagagttact
aaatggttgtctgagtttctgacatcatgtaaaaacaatttttctgcattattaaactct
ttgattttagctaagtgttttaggtgcaaactgtgggaaaattctctgcatgtatccaaa
cagctagaaaaaattggagtaacattatcaaatgcaatggtaaatgcaggtctgacatca
tttaaaaaaattgaagatgcaaatgcaagggaacttgaattgattgtaaatagacatccg
ccttttggaaaccaaataaaagaatctgtgctacacctgccaaaatatgcacttgctatt
gaacagcttgcaaaatactgtgatacagtggccgaaatcttagtgaccattacattaaca
aactttaaacagcttcagattaagagaactgcaccagactgtcactatgtaaccttaatt
ataggagatgctgataatcaagtggcttttaaacagaaaattatggattctgtcttactg
aagaatggaaattggactaaaaaaattgaagtgaaaagagctcttaaatctgaggaactt
agtatacatttaattagctctgaatatgttggtgtggatattcagcaaaactatacagcc
ttttacataggaccaaaaaagtttggaaatgaagtggttttacaaagaaaattagaagct
gagtcttcacctgacatttatcatgccttttcaaaagcagcagcagcagcaagaaaggct
ccaggaggtacctgtaatcgagggatcacttacatgaaacttgggaacagagaatgcagc
catcactgtaaaaataaagatgtatgtggacatgactgctgcaaaattggagtttcacag
aaatctgagttgaagagagattcaaagttttcttcatacctaactgatttaaggaacaga
aactcaacttcatcagttcccccagtaaaaagattaaagatgcagatgcagttaaataaa
agtcaaaatgtggatctgaaacaatttgtttttacacccaaatctttgctgccaacattg
ccgaggtctaactatgcgcagtcctctgactcaaattcattggaacattggaataatgtt
aatatccttggtagacctccaagccaactgcaatcagagagttatgaaaagaataatttc
acttggaaacagtctgtgactgtaagcaaggagagctatcagatgatgacgtcaaagaaa
aatcttaaagaatctttaatgaataatttgactgatgcagataaaagcagctcttggttt
tcagagtctttgaatgtgaactttgaattgggagatgaagtttggaatgattttgatgat
gacagattaatacatgccagcagctttttcactggtatggagagtagagaagatttagga
tctggaaacaccagccttgaaaatataatagaacgtaaaccactgtttcagaattcagag
agcaaagtcacaagtgacatttcaaaaactttttgcatgttacaagataaacctgatgtt
catctacaaaattccactttttctacattaaatgcaccatcagaaatgcagttatttaca
caatatggaaatataaaaacttttagctttcaagaaagaacacatagaaatcttccacaa
gagttgaaaaacattgaggtacctccaagttcagaaataatctcaggttcctctcaattt
attggaaaggggaatttttttatttgcaacaaagaaaggaaaaaagaaattgatgtcaga
tatctttcagatgatgaaactaatgatgttaagcctttccttggaatatttgatggcatt
ttctaa
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