Pelodiscus sinensis (Chinese soft-shelled turtle): 102449408
Help
Entry
102449408 CDS
T02980
Symbol
CNGA1
Name
(RefSeq) cyclic nucleotide-gated channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102449408 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102449408 (CNGA1)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102449408 (CNGA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF6474
PhoU
Ion_trans_2
NPR3
MDM10
TM-like_Thioredoxin-like_C
NPV_P10
Sec62
Motif
Other DBs
NCBI-GeneID:
102449408
NCBI-ProteinID:
XP_075787240
LinkDB
All DBs
Position
5:87779620..87812923
Genome browser
AA seq
729 aa
AA seq
DB search
MKIGVINTHHSYINVPRLAVQNADKGIGRMENGDSRSLAVEYDGLSILQTQERGGSCSGS
TNNSQAVKRILQGIPHFLNTLKKWDKRISNEGCQIPDSFLEKIQGPQPRWSNNCNNHNHC
DKKAEEIMEQCQPSAFAQYNVNNNSNKDEEEKKKKEKKSKSEGKKEKKKDTEMQKNKEKK
EKHRNKDKHKKKVKKDEEKKDLFVIDPSGNLYYYWLFCIAVPVMYNWTMIIARACFDELQ
NEYLGMWFFFDYISDIIYIADMFVRIRTGYLEQGLLVKEELKLKQKYTGTLQFKLDLLSV
IPTDLLYFKLGLNYPELRINRILKVSRMFEFFQRTETRTNYPNIFRISTLVMYIVIIIHW
NACMYYSISKAIGFGTDTWVYPNISDPEFGRLARKYVFSLYWSTLTLTTIGETPPPVKDS
EYFFVVVDFLVGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVSKEIEKR
VIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFSDCEAGLLVELVL
KLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVILGDGSYFGEISILNIK
GSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQILLKDGLLDINV
ANARSDSKDINEKVIQMEGSVDNLQTKFARLLAEYDASQQKLKKRLTQVEKILKSTTHFE
FSDLEETDK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggcgtgattaacacccatcattcctatataaatgttcccaggctggcagta
caaaatgctgataaaggcataggaaggatggagaatggagacagcaggtccttggctgta
gagtatgatggtttatccatattacaaacacaggagcgtgggggcagctgtagtggttcc
acaaacaactctcaggcagtgaaaagaattctacagggaatacctcactttctgaatacc
ttaaagaagtgggacaagaggatttccaatgaaggctgccaaatcccagactctttcttg
gaaaaaattcaaggtccacaaccaagatggagcaataattgtaataatcataatcactgt
gataagaaagcagaagaaatcatggaacagtgccaacctagtgcctttgcacagtacaat
gttaacaacaacagtaataaagatgaagaggagaaaaagaaaaaagaaaagaagagcaag
tctgaaggtaaaaaggaaaagaaaaaggacacagaaatgcaaaagaacaaggaaaagaag
gaaaaacatagaaataaagataaacataagaagaaagttaagaaagatgaggagaagaaa
gatctttttgttattgatccatcaggaaacttgtattactactggctgttttgcatcgcc
gtacctgtcatgtacaactggaccatgatcattgctagagcctgttttgatgaacttcag
aatgaatatttaggaatgtggttcttctttgattacatatcagatataatctatattgct
gacatgtttgtacggataagaacaggttacctggaacaaggtttgttggtgaaagaagaa
cttaaacttaaacaaaaatatacaggaactttacaatttaaactagatctactgtcagtc
ataccaactgatctactttactttaaattagggctaaactatccagaactaagaataaac
agaatacttaaagtatctcggatgtttgagttttttcagcgtacagaaacaaggacaaac
tatccaaatatcttcaggatctctactcttgttatgtacattgtgattattattcactgg
aatgcatgtatgtactattcaatctccaaagccattggatttgggacagacacatgggtc
tacccaaacatctctgatcctgaatttggccgtctggctagaaaatatgtatttagcctc
tactggtcaacgttgaccttgaccactattggggaaacacctcctccggtaaaggattct
gagtacttctttgtggttgttgacttcttggttggggttttgatctttgctactattgtt
ggtaatattggttccatgatctccaatatgaatgctgccagagcagagtttcaaggaagg
attgatgctatcaagcagtatatgcactttcgaaatgtgagtaaagaaatagaaaaaaga
gttatcaagtggtttgactatttgtggacaaataaaaaggctgtggatgaaagggaagtt
ttaaaatacctaccagataaattaagagcagaaattgcaatcagtgttcatctggacaca
ttaaagaaagttcggattttttcagattgtgaagctggcctgttagttgaactagtcttg
aagctgcagcctcaagtttacagtcctggagattacatttgccgaaagggggatattgga
agagagatgtacataatcaaagaaggcaaacttgctgtagtagctgatgatggaattaca
caatttgtgatcctgggtgatggcagctactttggggaaattagcatacttaatatcaaa
ggcagcaaagctggcaatcgaagaacagccaacatcagaagcattggatactcagatttg
ttttgtctatctaaagatgacctcatggaggctttaacagagtatccagatgcaaaggca
atgttggaagagaaaggtaaacaaatcttgctgaaggatgggttactggatatcaatgtt
gcaaatgcaagaagtgattctaaagacatcaatgaaaaggtcattcaaatggaaggatcg
gtggacaacttgcaaacaaagtttgctaggcttttggctgaatatgatgcctcacagcag
aaactgaaaaaacgactgacacaagttgaaaaaatactgaaatcaactacgcactttgaa
ttctcagatttagaagaaacagataaataa
DBGET
integrated database retrieval system
