Pelodiscus sinensis (Chinese soft-shelled turtle): 102449408
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Entry
102449408 CDS
T02980
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102449408 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102449408 (CNGA1)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102449408 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF6474
PhoU
Ion_trans_2
MDM10
NPR3
Connexin
NPV_P10
Sec62
PFF1_TM
RNA_pol_Rpc4
ADI
Motif
Other DBs
NCBI-GeneID:
102449408
NCBI-ProteinID:
XP_006113573
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MKIGVINTHHSYINVPRLAVQNADEGIGRIENGDSRSLAVEYDGLSILQTQERGGSCSGS
TNNSQAVKRILQGIPHFLNTLKKWDKRISNEGCQIPDSFLEKIQGPQPRWSNNCNNHNHC
DKIAEEIMEQCQPSAFAQYNVNNNSNKDEEEKKKKEKKSKSEGKKEKKKDTEMQKNKEKK
EKHRNKDKHKKKVKKDEEKKDLFVIDPSGNLYYYWLFCIAVPVMYNWTMIIARACFDELQ
NEYLGMWFFFDYISDIIYIADMFVRIRTGYLEQGLLVKEELKLKQKYTGTLQFKLDLLSV
IPTDLLYFKLGLNYPELRINRILKVSRMFEFFQRTETRTNYPNIFRISTLVMYIVIIIHW
NACMYYSISKAIGFGTDTWVYPNISDPEFGRLARKYVFSLYWSTLTLTTIGETPPPVKDS
EYFFVVVDFLVGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVSKEIEKR
VIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFSDCEAGLLVELVL
KLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVILGDGSYFGEISILNIK
GSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQILLKDGLLDINV
ANARSDSKDINEKVIQMEGSVDNLQTKFARLLAEYDASQQKLKKRLTQVEKILKSTTHFE
FSDLEETDK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggcgtgattaacacccatcattcctatataaatgttcccaggctggcagta
caaaatgctgatgaaggcataggaaggatagagaatggagacagcaggtccttggctgta
gagtatgatggtttatccatattacaaacacaggagcgtgggggcagctgtagtggttcc
acaaacaactcacaggcagtgaaaagaattctacagggaataccccactttctgaatacc
ttaaagaagtgggacaagaggatttccaatgaaggctgccaaatcccagactctttcttg
gaaaaaattcaaggtccacaaccaagatggagcaataattgtaataatcataatcactgt
gataagatagcagaagaaatcatggaacagtgccaacctagtgcctttgcacagtacaat
gttaacaacaacagtaataaagatgaagaggagaaaaagaaaaaagaaaagaagagcaag
tctgaaggtaaaaaggaaaagaaaaaggacacagaaatgcaaaagaacaaggaaaagaag
gaaaaacatagaaataaagataaacataagaagaaagttaagaaagatgaggagaagaaa
gatctttttgttattgatccatcaggaaacttgtattactactggctgttttgcatcgcc
gtacctgtcatgtacaactggaccatgatcattgctagagcctgttttgatgaacttcag
aatgaatatttaggaatgtggttcttctttgattacatatcagatataatctatattgct
gacatgtttgtacggataagaacaggttacctggaacaaggtttgttggtgaaagaagaa
cttaaacttaaacaaaaatatacaggaactttacaatttaaactagatctactgtcagtc
ataccaactgatctactttactttaaattagggctaaactatccagaactaagaataaac
agaatacttaaagtatctcggatgtttgagttttttcagcgtacagaaacaaggacaaac
tatccaaatatcttcaggatctctactcttgttatgtacattgtgattattattcactgg
aatgcatgtatgtactattcaatctccaaagccattggatttgggacagacacatgggtc
tacccaaacatctctgatcctgaatttggccgtctggctagaaaatatgtatttagcctc
tactggtcaacgttgaccttaaccactattggggaaacacctcctccggtaaaggattct
gagtacttctttgtggttgttgacttcttggttggggttttgatctttgctactattgtt
ggtaatattggttccatgatctccaatatgaatgctgccagagcagagtttcaaggaagg
attgatgctatcaagcagtatatgcactttcgaaatgtgagtaaagaaatagaaaaaaga
gttatcaagtggtttgactatttgtggacaaataaaaaggctgtggatgaaagggaagtt
ttaaaatacctaccagataaattaagagcagaaattgcaatcagtgttcatctggacaca
ttaaagaaagttcggattttttcagattgtgaagctggcctgttagttgaactagtcttg
aagctgcagcctcaagtttacagtcctggagattacatttgccgaaagggggatattgga
agagagatgtacataatcaaagaaggcaaacttgctgtagtagctgatgatggaattaca
caatttgtgatcctgggtgatggcagctactttggggaaattagcatacttaatatcaaa
ggcagcaaagctggcaatcgaagaacagccaacatcagaagcattggatactcagatttg
ttttgtctatctaaagatgacctcatggaggctttaacagagtatccagatgcaaaggca
atgttggaagagaaaggtaaacaaatcttgctgaaggatgggttactggatatcaatgtt
gcaaatgcaagaagtgattctaaagacatcaatgaaaaggtcattcaaatggaaggatcg
gtggacaacttgcaaacaaagtttgctaggcttttggctgaatatgatgcctcacagcag
aaactgaaaaaacgactgacacaagttgaaaaaatactgaaatcaactacgcactttgaa
ttctcagatttagaagaaacagataaataa
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