Pelodiscus sinensis (Chinese soft-shelled turtle): 102449485
Help
Entry
102449485 CDS
T02980
Symbol
BOC
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102449485 (BOC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pss04515
]
102449485 (BOC)
Cell adhesion molecules [BR:
pss04515
]
Immunoglobulin superfamily
Other
102449485 (BOC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
V-set
Pur_ac_phosph_N
ISET-FN3_linker
Fn3_ROS1
C2-set_2
Ig_4
Ig_5
Fn3_VIN3
DUF7042
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
102449485
NCBI-ProteinID:
XP_075762772
LinkDB
All DBs
Position
1:complement(147933262..148068552)
Genome browser
AA seq
1117 aa
AA seq
DB search
MALLMRATDPVSAYGRPAWVLLLQAALHRVTMTPGRKRPMAAVTCLILAAAGYFANLGES
LQVTVQPASAVQKYGGLVNLGCVVEPLKVNVTWRLNGKELVGSDAALGIHIELGKLLILA
LNNHTVGRYQCIARVPEGVVASVPATVTLAKLKDFKFDGQHVIEVDEGNTAVIACDLPES
HPKAQVRYSVKQEWLEASRDNYLIMPSGNLQIVNASQEDEGTYKCAAYNPVTQEVKTSVS
SERLRVRRSTAEAARIIYPSEAQTIIVTKGQSLILECVASGIPPPRVTWAKNGSSISGYN
KTRFLLSNLLIDATSEEDSGTYSCMADNGVGEVGAAFMFYNVQVFEPPEVTMELSQQIIP
WGQSAKFTCEVRGNPQPSVMWLRNAVPLSSNHRFRLSRKALRVVSVGPEDDGIYQCMAEN
EVGSAQAVVHLRTAQPGTTMKPWQDFKSGSAQSPTPPPSDKALKEKTVLAASLQCMTHRG
QVSPAEAPIILSSPRTSKTDCYELVWRPRHDSKAPVLYYVVKYRKIMNSSANWTVRDIPA
TQHHLSLTRLDPGSLYEVEMAAYNCAGEGQTAMVTFRTGKGRRPKPDIVASKEQQIQRDD
PGTSTQSSSQLDNSRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLK
KLGDWVLATSDIPPSRLSVEIPGLEKGMSYKFRVRALNILGESDPSAASRPYVVSGYSNR
VYERPVAGPYITFTDAINETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDV
VEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARKSLGLPGRLLPSTVP
PQQHPPLSGGHSGLGTGAMVARSSDLPYLIVGVVLGSIVLIIVAFIPFCLWRAWSKQKQT
IDLGFPGTGLLVSSCQYTMVPLQGVPAARANGQLYANGVHLNGTRPSGGTGYPSTKPRNY
SPDEVQQDETNTLLQARVLQNGSVQEHYPTSRLSDARPEVSSFLYGLPDDSTHQLLQTHD
DCCHLQEQLVGLHLPVTGSKMGGPSLEALQDPAFHRGTPCCLGLVPVEEVDRLDCCQLRG
ELCPQSPAITCLGQDPARQLSSSPPRHMPFETPPPTS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctgatgagagccacagaccctgtgtcagcttatgggcgccccgcctgggtc
cttctgctccaggctgcgctgcacagggtgacaatgaccccaggaaggaagagaccaatg
gctgctgtcacctgtctgatcctagcagctgctggttactttgctaatttgggtgaatct
cttcaggtcaccgtccagcctgcttctgccgtccaaaagtatggtggcttggtgaacctg
gggtgtgtggtagagcctctgaaagtcaacgttacctggcggctgaatgggaaggagctg
gtggggtcagatgcagcgctggggatccacattgagctggggaagctcctcatcctggcc
ctcaacaaccacaccgtgggccggtatcagtgcatcgcccgcgtgcctgagggagttgtt
gccagcgtcccagccacagtgacattagccaaactcaaagacttcaaatttgatggtcag
catgtgattgaggtggatgaagggaacacagctgtgattgcatgcgatctgcctgaaagc
caccccaaagcccaggtgcgctacagtgtgaaacaggagtggctggaggcctccagagac
aactacctgatcatgccctctgggaaccttcagatagtcaatgccagccaggaggatgaa
ggaacgtacaaatgtgctgcctataatcccgtgacccaggaagtgaaaacctcagtctcc
agtgagagactccgcgtgcgacgctctacagcggaggcggcacggataatctatccctcg
gaggctcagaccatcattgtcaccaaaggtcaaagcctcatcctggagtgtgtggctagt
gggatcccacctccacgggtcacctgggccaagaacggctccagtatttctggctacaac
aagacccgcttcctgctcagtaacctgctgatcgacgccaccagtgaggaagactctggc
acctacagctgcatggctgacaatggggtgggcgaggttggagctgcgttcatgttctat
aacgttcaggtgttcgaacctcctgaggtcaccatggagctgtcccagcagatcatcccc
tgggggcagagtgcaaagttcacttgcgaggtccgagggaacccccagccctcggtcatg
tggctgcgcaatgccgtgcccctctcttccaaccaccggttccggctgtctcggaaggcc
ctacgggtggtgagcgtggggccagaggatgatgggatatatcagtgcatggcggagaat
gaagttggcagtgcacaagccgtggtgcacctgaggaccgcccagcctggaacgacgatg
aagccctggcaagacttcaagtcgggctcagctcagtcccccacgccaccccccagtgac
aaggctctgaaggagaaaaccgtgctggcagcctctctccagtgtatgactcaccgaggg
caggtgtctccggctgaggcacccatcatcctcagttctcccaggacgtccaagacggac
tgctatgagctggtgtggagaccgcggcatgacagcaaggcccctgtcctttactacgtg
gtgaagtatcgcaagattatgaactcttcagccaactggacagtcagggatatccctgcg
actcagcaccacctgtccctgaccagactggatcctgggagcttgtacgaagtggagatg
gcagcatacaactgcgcaggggagggacagacagccatggtgaccttcaggactggtaaa
ggccgacgacccaaacctgacatcgtcgccagtaaagagcagcagatccaaagggacgac
ccaggcactagcacgcagagtagcagtcaactggacaacagccgcctatcccctccagag
gcaccagaccgccccaccatctccacggcatcagagacgtctgtctacgtgacctggatc
ccccgtgggaatgggggcttccctatccagtctttccgagtggagtacaagaaactgaag
aagctaggagactgggtgctggccaccagtgacatccccccctctcggctctcggtggaa
atcccaggtctggagaaaggcatgtcctacaagttccgtgtccgggcactgaacatactg
ggagagagtgaccccagcgccgcatctaggccctacgttgtgtcaggctacagtaaccgg
gtgtacgagcgccctgtcgccgggccttacatcaccttcaccgacgccatcaacgagacc
accatcatgctgaagtggatgtacatcccagccagtaacaacaacaccccgatccacggc
ttctacatttactaccgccccaccgacagcgacaatgacagcgactacaagaaggacgtg
gtggaaggggaccggtactggcactccatcagccacctgcagccagagacctcctacgac
atcaagatgcagtgcttcaacgagggcggcgagagtgagttcagcaacgtgatgatctgc
gaaaccaaagctcggaagtcacttgggctgcctgggcgcctgctgccctcaacggtgccc
ccgcagcagcatccgccactcagtggtgggcacagtgggctggggactggtgccatggtg
gcccgctccagtgatctgccctacctgattgtaggggtcgtgctgggctctatcgtcctc
atcattgtggctttcatccccttctgtctgtggagagcctggtccaagcagaaacaaacc
atagacttgggcttccctggaacgggactgctggtgtcttcttgccagtacaccatggtg
cccctgcaaggcgtccccgcggctcgagccaatgggcagctctatgccaatggtgtgcac
ctgaacggtacccgcccctcaggtgggacaggctacccaagcacaaagccccgaaactac
agtccggatgaagtgcagcaggatgagaccaataccttactgcaggcgagggtgctgcaa
aacggaagtgtccaagaacactatccaacctccaggctctctgatgcaagaccagaagtc
agttccttcctctatggcctcccagatgactctacccatcaactgctccagacacatgat
gactgctgtcatcttcaagaacagctcgttggcttgcatctcccagtgacaggaagcaag
atgggagggcccagcctggaagccctgcaagatcccgcattccacagaggtaccccttgc
tgccttggcctggtgccagttgaagaagtagataggctggattgctgccagctcagagga
gaactgtgcccccagagcccagccatcacctgtttggggcaggacccagcgagacagctg
agcagcagccctccacggcacatgccctttgagacgcctcctcctactagttag
DBGET
integrated database retrieval system
