Pelodiscus sinensis (Chinese soft-shelled turtle): 102449728
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Entry
102449728 CDS
T02980
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
102449728 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102449728 (DMXL1)
Membrane trafficking [BR:
pss04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102449728 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
102449728 (DMXL1)
RAVE complex
102449728 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_Vps41
MIOS_WD40
ASA1
Motif
Other DBs
NCBI-GeneID:
102449728
NCBI-ProteinID:
XP_075788076
Ensembl:
ENSPSIG00000017888
LinkDB
All DBs
Position
6:complement(56981171..57117342)
Genome browser
AA seq
3081 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLLGQPLTAYASGCDIVILGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNMICIFDPVTILKQKSNHPAGIYYQWQKSGQILLDSIAHNITW
DPTGTRLLTGSSCLQLWSNINLENQSEDGNPEKTDVSFGDWQRIWQCKMASQVHLMKFSP
DGEFFATAGKDDCLVKVWYNTDSWRSAVTPQSSSPQKQSQDVDFSFVYLAHPRSVNGFSW
RKTSKYMPSGAVCNVLLTCCKDNVCRLWAETLLPNDSLSCAGGYNHWTEPVNLTNNFKRN
ASSKERMQNALELNLKPFRRGRRRSLTLIAHTGYSPHQQDPHEVHRNTPLHANALCHFHI
AASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKKSFEP
HSSETSTEESNQLDGKSDEEADDNGEDQKGNQEKKEQGSEKNIPNSGLVPLSSAVIDHEI
EILLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPIGLTRSSSMLICAGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALSSPDDDSTKQNDASTTGESSLRSQNRDTTSVTSQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYQAIIDAK
KLLCELSNPEISKYVGEVFNIISQQSTARPGCIVELDAITELHGRKTQLLHVFQENFILN
NHEAKTPEKNCLEDSGQLQNGFSEKFYLIVIEYAQNCSLLHMWNLHLKSIPVSVDEKIDS
NISEGVSHQEELYSSSPDREKIQSPFTHKYRACRANLQSTSRLTLSSEMVYSQELNLPDG
VEIISVKPSAGHLSSSSMYPVCQAPYLLATSCSDGKVRFWRCKVTPESVAASTPEYTVNS
NVTYIWEEWPLLVEDRLLSSSAVSVPGRPIEVSCAHTNRLAVAYKQTTSKNSRCSQDFMM
HVGIFECESTGGSCWILEQTLHLDEISTMLDSAISIDSNLMAYNKQEMSNSEGTLPSIKH
LVHLDWMSREDGSHILTVGIGSKLYMFGQLAGNMHDQTNKEISPLPWWENAKVTSLCKFV
LLRCVDLVSSVEGSPPLPVSLSWVRDGILVVGMDCEMHVYSQWQPPSKQELVTTDSYSGS
TPSITSLMKQSQSTGSGLHPPKRSLTRSMTSLAQKLSGKRTAFDLSVEMEDSGLFEAAHA
LCPTLPQYHPFQLLELMDLGKVHRAKAILSHLVKCIAGEVVAVNESEPNPDRRLRSLTIS
ASGSTARDPRTFNKTENTDYTEIDSVPPLPLYALLAADDDCSHVYSEKPNNQNNLNKQNG
ISDENYENLFQNSSLSTDDLTVFEAEEDNTKPKVIDLSQYSPTYFGPEHAQVLSRHLLHS
SLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVQLHTFLTTS
LPPVHRAQLLHQGLSTRHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGVGWWVRNI
HSLRRCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKETKMTQFFGNNFTED
RWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLGDIQLALVISRLYESEF
EVSSTYKSILQKRILGGAYLGKESSSTMHCDPFLRSMAFWILEDYSRALDTLIKQPAGNE
DENGASPSCDPAVFNFYNYLRTHPLLLRRHFGSSETSSTRICLTVENGLSDKINLSERRL
FFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPFGMNSSFMDVSKDFSPSSPIKLDTKED
KASIVDWSQPVLNGLGSSSDCSSDKQSSSALSFDWSQPSLIFQDEPLELKWDSDKDEESE
DSPLVMKDLKPLQKLTIEKLDETSSNYSESFSAMDENNVLSPSEDVISAQLKFRACLKIL
TVELRTLSTGYEVDGGKLRYQLYHWLEREVIALQKTCDYSAEIEEVQPGISMSGEIALSD
NIEDLSDQQKAMLQRENFQRRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLL
QESQQEQSIQTLPSPLPEQNSIPLLFACTASAKTVVASPLLHLSNLTHDILHTVINLDSP
PHPDIQNNKIHVMHTLAASLSACIYQCLCGGPSYSSLQANQFTGTVYQTLLLTQRPTLRT
TSLDETVTPNTSPTQWPGITALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATH
SSSELYRIMTHPFNDKMWSAIFGGGAHIPRKGQMQQRTKTGRHFSMPSPHEVVVFSMECV
GFSKSLAAINTHSPTKHEVSSSVDNGKKQQRSCTLLSKISPKESSQSPSSEEQESPSYRE
KFIPPELSIWDYFIAKPFLPSSQSRIEYDSEESQGSDDEDDAFASDSHLQEHSNSNSYSW
SLMRLAMVQLVLHRLKNFYPLAGHDLSELPVSSPLCHGILKTFQRWEQVLLRRLEIHGGP
PQNLISAHTSEDALSAGPALLRHKALLEPTNTPFNSNSHVALSVKRLWQYLVKQEEVQET
FIRNIFTKKRCLNESLEDHSETIKNTMMEEPIFNKVESDLEHPGGKARIIHKESDIITAF
AVNKANRNCIAIASSHDIQELDVSGILATQIYTWVDDDTEVEAKGSDDFLVIHARDDLAN
VQGTTPYTHSNPGTPINMPWLGSTQTGRGASVLIKKTINNVRRMASHPSLPYYLTGAQDG
SVRMFEWGHSQQITCFRSAGNTRITRMRFNHQGNKFGIVDADGYICLYQTNWKCCPLTGS
TPKPYLTWQCHNKTANDFVFISSSSLIATAGQATDNRNICLWDTLVAPANSLVHAFICHD
SGATVLAYAPKHQLLISGGRKGFTCIIDLRQKQQRQLFQSHDSPVKAIAVDPAEEYFVTG
SAEGNIKVWSLSTFNLLHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCGADGTVKMR
ILPDQFSPLNELLKSEVKFML
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggcgccgtgaaccccggggacaactgcttctccgtg
gggagcctcctcggccagccgctcacggcttatgcatcaggatgtgatatcgttatcctg
gggactgattttgaaagattacaaataatccctggagcaaaacatggaaatattcaagtg
ggatgtgtggactgttcaatgcagcaaggcaagattgcagcttcttatggaaatatgatt
tgtatctttgacccagttaccatcctgaaacagaagagcaatcatcctgctgggatatat
taccagtggcagaagagtggtcaaattttactggattctatagcacataatataacatgg
gatcccactggaactcgtctcttgactggttccagctgtctgcaactttggtccaatatt
aatttggaaaaccaatctgaagatgggaatcctgaaaaaacagatgttagctttggcgac
tggcagcgtatctggcaatgcaaaatggcttcccaagttcatctaatgaaattttcaccc
gatggagaattctttgctactgcaggaaaggatgactgtcttgtaaaagtgtggtataat
acagatagctggcgatctgcagtaactcctcaaagttcaagtccacagaaacaatcacaa
gatgttgatttttcatttgtttacttggcccatcctcgatctgtaaatgggttttcatgg
aggaagacaagcaagtacatgccaagtggtgctgtatgcaatgtactgttgacttgctgt
aaggataatgtatgccgtctctgggcagagactttgttacccaatgacagtttatcatgc
gctggtggatacaaccattggactgaaccagtgaacttaacaaataacttcaaaagaaat
gcttctagtaaggaacgaatgcaaaatgctttagagttaaatctaaagccctttcgaaga
ggaaggagacggtctcttaccctcatagcacatactggatattccccacatcagcaagat
cctcatgaagttcatcggaacactcctttgcatgcaaatgcactctgtcactttcatatt
gctgccagcatcaatccagccacagacattcctctactcccttctatcacatctctgagt
ctcagtgagaatgaagaaaaaagtgggccatttgtagtgcattggctgaacaataaagaa
ttgcattttaccctgtccatggaagtatttttgcaacaacttaaaaagagctttgagccg
cattcttcagagaccagcactgaagagtcaaaccagttggatggcaaatcagatgaagaa
gctgatgataatggagaagatcaaaaaggaaatcaagaaaagaaagaacagggtagtgag
aaaaatattccaaactctggcttggtgcctttatcttctgctgttattgatcatgagatt
gaaatactattgtctgagtggagcaaaaatgcagacatgttgttcagtattcatcccatg
gatggttccttactggtatggcatgtggactggctagatgaatatcagcctggtatgttt
cgtcaggtgcaggtgtcttttgtttcaagaattccagtagcatttccaactggtgatgcg
aattctctttgcagaagtatagtgatgtatgcctgcaccaagaatgttgacctcgctatt
caacaaggcaaacagaagcccattggcctgacacgttcatcatctatgcttatctgtgct
ggccacagtaaatcaactaacagtttaaaattaagtattttcacccccaatgttatgatg
atatcaaaacatgcagatgggtctttaaatcagtggctagttagttttgcagaggagtct
gctttttcgactgtgctcagtatttcacataaatctcgatattgtggtcaccgttttcat
cttaatgatctggcttgtcattcagtgttacctttgctgctgacaacttctcatcataat
gctttaagttcaccagatgatgacagtacaaaacagaatgacgcttcaactactggagag
tcgtctttaagatctcagaatagagatactacaagtgtaacatcccaggatcccaatgca
gtttatagcgagcttattctttggcgagttgacccagttgggccattatccttttctgga
ggagtttctgaacttgcacgaattaattctctccatgtttcggctttttctaatgtggca
tggctgcctacacttatacccagttactgtctcggtgcatactgcaattctcccagcgca
tgctttgtggcaagtgatggacaatatctgagattatatcaggctataatagatgctaaa
aagcttttatgtgagctgtctaatcctgaaatttctaaatacgttggtgaagtttttaac
atcataagtcaacagtcaactgcaaggccaggatgcattgtagagttagatgctattaca
gagctccatggcagaaaaacacagttacttcacgtttttcaggaaaacttcattttgaat
aaccatgaggcgaaaacacctgaaaagaactgtttagaagactctggacagctgcaaaat
ggattctctgagaaattttacttaatagtaattgaatatgctcaaaattgctcattatta
cacatgtggaatttacacttgaaatccattccagtttcagtggatgaaaaaatagactca
aatatatctgaaggagtatcacatcaagaagagttatattcgtcctctccggatcgagag
aagatccagtctcccttcacacataaatatcgggcttgtagagcaaaccttcaaagtact
agtcgtctgacactctcttcagaaatggtttatagtcaagaattgaatttaccagatgga
gtggaaataataagtgttaaaccatcagcagggcacttgagttcctcttcgatgtatcca
gtttgtcaggccccttatctactggcaacttcttgctcagatggaaaagtaaggttctgg
cgttgcaaagtgactcctgaatcagtggctgcttctacaccagaatatactgtaaatagt
aatgttacatatatatgggaagaatggccattacttgttgaggatcgacttcttagtagt
agtgctgtgagtgttccaggcaggccaattgaagttagttgtgcacatacaaatagattg
gctgtagcatacaagcaaacaacatctaaaaatagtcgctgttctcaagatttcatgatg
catgttggtatttttgaatgtgaatctacaggaggatcgtgttggattctggaacagact
cttcatttagatgaaataagcacaatgttggactctgccattagtattgacagtaattta
atggcatacaataaacaagaaatgtctaatagtgagggtactttgcccagcataaagcac
ttggttcacttagattggatgtctagggaagatggatcacatatcctaacagtaggaatt
ggatcaaagctttatatgtttggacagttggctgggaacatgcatgaccaaactaataag
gagatctctcctttgccatggtgggaaaatgcaaaagttacatccctttgtaagtttgta
ctgctacggtgtgtggacttggtttcttcagtagaaggatcaccacctctgccagtttct
ttatcctgggtacgtgatggcatccttgtagttgggatggattgtgaaatgcatgtttat
tctcagtggcagcccccttctaaacaagagctagttacgactgattcttacagtggaagc
acaccatctatcaccagtttgatgaaacaaagccagtcaactggttctggcctgcatcca
ccaaagcgaagtttaaccagatccatgactagtcttgcacagaaacttagtggaaagaga
actgcatttgatctctctgtagaaatggaagattctggtctttttgaagcagctcatgca
ttatgtccaactttacctcagtaccatcctttccagcttctagagcttatggaccttggt
aaagtacatagagcaaaagccatcctgtctcatttggttaaatgtatcgctggggaagtt
gttgctgtaaatgaatctgaacctaatcctgatcggcgacttagatctctcacaattagt
gctagtggaagcactgcaagagatcccaggactttcaacaaaactgagaatacagactat
acagaaatagactctgttccaccacttcctttgtatgcattacttgctgcagatgatgac
tgctcacatgtttattcagagaaacccaataatcaaaataatttaaataaacaaaatggc
atctcagatgaaaattatgaaaatctttttcaaaactccagcctgagtacggatgatctt
actgtgtttgaagcagaagaagataatacaaagccgaaggttattgacctttctcagtac
agcccaacttactttggaccagagcatgctcaagttctttctcgtcacttgctgcattct
agcttaccaggtctcaccaggatggagcaaatgtcactgatggcattggcagatacaatt
gctaccaccagtactgatattggagaaagcagagacagaaaccagggtggagaaacactt
gatgaatgtggcttaaaattccttttggctgttcagctgcacacatttctgacaacctca
cttcctcctgtccatcgagcccagctgcttcaccaaggtttgtctactcgtcactttgcc
tgggcatttcattcagtagcagaagaggagctactgagcatgctccctgctgtgcagaag
ggggatccgacctggtcagaactcagagctatgggtgtaggatggtgggttcggaatatc
catagtttgcgaagatgcatagaaaaggtagccaaagcagcctttcaacgaaacaatgat
ccacttgatgctgctattttttaccttgcaatgaaaaagaaggctgtgatttggggatta
tacaggtcccaaaaagaaactaagatgacacagttctttggaaacaattttactgaagac
agatggcgtaaagcagcattaaagaacgcattttctttattaggcaaacagcgcttcgaa
cattctgcagcatttttcttgttggctggtcacttgaaggatgcagttgaggtttgcctt
gaaaaattgggagatattcagctggctctggtaatatcaaggctttatgagtcagagttt
gaagtatctagcacgtataaatccatactgcagaagagaattttgggaggtgcatatctt
ggtaaggagagctcatcaactatgcattgtgacccttttctacgaagtatggctttttgg
attttggaagattatagcagggctcttgacactctaattaagcaacctgctggaaatgaa
gatgaaaatggtgcctccccaagttgtgatcctgcagtgttcaacttttataattatctg
aggacacatcctctcctgttgagacgtcattttggctcttctgaaacatcttcaacacgg
atttgcctaactgtagaaaatggactgtcagacaaaataaatttaagtgaaagaagattg
tttttcactacagcacatgcccatttgaaggctggctgccctatgttggctctagaagtg
ttatcaaagatgccaaaagtggtcaagaagtcaaagccttttggtatgaattctagtttc
atggacgttagtaaagacttttcaccttcttcaccaataaagttagacacaaaggaagat
aaagcttccattgttgactggtcacaaccagtactaaatggtttgggatcatcttccgat
tgttcatcagacaaacagtccagctctgccctttcttttgattggagccaaccaagtctg
atattccaagatgaaccattggagttaaaatgggacagcgataaagacgaagaaagtgaa
gattctcctcttgtaatgaaagatctgaaacctttgcagaagctgacaattgaaaagcta
gatgaaactagttctaactactcagaatccttcagtgcaatggatgaaaataatgtttta
agtccatcagaagatgtgatctcagcacagttgaagtttagagcatgcttaaagattctc
acagtagagcttcgtacattgtccactggttatgaagtagatggtgggaaactgaggtac
cagctttatcattggcttgaaagagaagtgatagctcttcaaaaaacctgtgattacagc
gctgaaatagaggaggtacaaccggggattagcatgtctggtgaaattgctttaagtgat
aacatcgaggatttatctgaccagcaaaaagccatgctgcagagagagaattttcagaga
agacgacaatggcttctaaaatatcagtcactcctgaggatgtttcttagttactgtata
cttcatggatctcatggtgggggtttggcatctgtgagaatggaactgattttgctttta
caagaatctcagcaggaacagtcaatacaaacacttccaagtcctctgccagaacagaat
tctatacctctcctatttgcctgcacagccagtgccaaaacagtggtggccagtccatta
ctgcatctcagcaacctgactcatgatatattacatactgtaataaaccttgattcacca
cctcacccagatatccagaataataaaatacatgtaatgcatactttagcagcatcattg
tctgcctgcatctatcagtgcctttgtggaggacccagctacagttcattacaagcaaac
cagttcactggaacagtataccagacgctgctgcttacccagcgacctactctaagaaca
acaagtttagatgaaactgtaactcccaatacatctccaactcagtggccaggaataaca
gctctaattcgtcttttgaattctgctggtgaggaagcccagccaggactcacagtttta
ctctgtgaaattctaacagcagtctatcttagtctcttcatccatggtctggccacgcat
tccagcagtgaattatataggattatgacccatccttttaacgacaaaatgtggtctgct
atctttggcggaggagctcatattcctaggaaaggacagatgcaacagagaacaaaaact
ggaaggcatttctctatgcctagcccacatgaggtagtagtgttctccatggaatgcgtg
gggttttccaaatcccttgctgccatcaatactcatagtcctaccaaacatgaagtttct
tcttctgtagacaatggtaagaagcaacaaagaagttgtacgcttttatcaaaaatctct
ccaaaagaaagttcacagtctccatcctcagaagagcaagaatctccatcttatagggaa
aagtttatcccacctgagcttagtatctgggactatttcatagcaaagccttttcttcca
tcctcacaaagtagaatcgaatatgactcagaggagagtcagggaagtgatgatgaggat
gatgcttttgcatcagattcacaccttcaggaacactcgaattcaaattcttacagttgg
tcactgatgcgattggctatggttcagttggtgcttcataggttgaagaatttctatccc
ttggctggacatgatctttcagagcttccagttagctcccctctgtgccatggtattctg
aagacatttcaacgctgggagcaagttcttctccggcgacttgaaatacatggtggtccc
cctcagaatttaatttctgctcatacctctgaagatgcattatcagcaggtcctgctctc
cttcgccacaaagctttgcttgaacccacaaacactcctttcaactctaacagtcacgtt
gcactgtctgtgaagaggctttggcagtatctagttaaacaagaggaagtccaggaaacc
ttcatcagaaatatatttacaaagaaaagatgtttaaatgagtcattagaggaccacagt
gaaaccatcaaaaatactatgatggaggagcccatcttcaataaggtagaatcagatctg
gaacatccaggaggtaaagcaagaattattcataaagaatctgacatcattactgctttt
gcagtcaataaagcaaacaggaactgcattgcaatagcttccagccatgacattcaagaa
ctagacgtttctgggattcttgctacacagatctacacctgggttgatgatgacacagaa
gtggaagctaaagggtctgatgacttcttggttatacatgcacgtgatgacctggcaaat
gttcagggtactacaccttatacacacagcaatcctggtacccctatcaacatgccttgg
cttggcagtacacagactgggagaggtgcatctgtgctgataaagaagactattaacaat
gtcagaagaatggcttcccatccatccctaccttattacttgacaggtgcgcaagatggt
agtgtaagaatgtttgaatggggccattcacaacaaattacatgtttccgctctgctggc
aacacaaggataacacgaatgagattcaatcaccaaggaaataagtttgggattgttgat
gctgatggatatatatgtttgtatcagacaaactggaaatgttgcccacttactggaagc
acacccaaaccatatctgacatggcagtgtcacaacaaaacagccaacgattttgttttc
atcagttcctcctctttgatagccacagctggacaagctactgataaccgaaatatatgt
ttgtgggataccttagttgcacctgcaaatagtttagtacatgcttttatctgtcatgat
agtggggcaactgtgctagcatatgctccaaaacatcaacttttaatatcaggaggcaga
aaaggctttacttgtataattgatcttcgccaaaagcaacaacgacagctattccagagt
catgattctccagttaaagcaattgctgtggatcctgcagaagaatattttgttacagga
tctgcagaaggcaatataaaggtatggagtttatctacctttaatcttcttcacactttc
atcaatgagcatgctcgacagtcaattttcagaaacattggaacaggagtcatgcaaatt
gagacaggaccagcaaatcatatattctcctgtggagctgatggaacagtaaaaatgaga
atcttgcctgatcaatttagcccattaaatgaacttttgaaaagtgaagtgaaatttatg
ctctga
DBGET
integrated database retrieval system
