Pelodiscus sinensis (Chinese soft-shelled turtle): 102449877
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Entry
102449877 CDS
T02980
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3 isoform X1
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102449877 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pss03009
]
102449877 (WDR3)
Ribosome biogenesis [BR:
pss03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102449877 (WDR3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Utp12
DSE1_N
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_VPS8
ASA1
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_WDR19_1st
WDR54
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_RIG_1st
PAC11
Cep192_D5
Motif
Other DBs
NCBI-GeneID:
102449877
NCBI-ProteinID:
XP_075760994
Ensembl:
ENSPSIG00000017455
LinkDB
All DBs
Position
1:complement(141003236..141032461)
Genome browser
AA seq
960 aa
AA seq
DB search
MQPHHLEHQGQPPPETGNCTMGLTKQYLRYTASALFGVIASQKGNIVYVTLRGEKGRYVA
VPACEHVFIWDTRKGEKVLILQGLKHEVTSLCPSPDGLHLAVGYEDGSIRVFSLLSGEGK
VTFNGHKAAVMTLQYDQLGGRLVSGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRE
KNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGLAFVSEEKRLITGTADSELRVWNI
TYTQEATDPNEPESKKSKGTPARAEETSEVDETSDLEETPEERLLRCNKVGSIMREGRDR
VVTLATDRTGRILACHGTDSVLEVFCVLSEDEIRKKMEKKMKKARKKAKQKSEEEEAPEG
SVEMSLQEEIQRVTSIKASAKIKSFDLILSPKGELKATLMLQNNTIESYILNPSAQVTQV
VRASKITIGGHHSDVRTLAFSSDNIAILSAAADSVKIWNRSTLQCIRTMACEYALCSLFV
PGDRQVIIGTKTGKLQLYDLASGSVLETVAAHDGALWSISLSPDQRGFVTGGADKCVKFW
DFELVKDENSTQKRLSMKQTRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKIFYTDTLKF
FLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMTLQFVP
KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSSSHDKSLRLWE
RTREPLILEEEREMQRDVEYEESVAKEEQPVVAGETQGETGLAGKKTIETVKAAERIMEA
VELYREETAKLKEHQAICKAAGKEVPLPVNPILRAYGNISPSAYVLEVFKKVKSSELEES
LLVLPFSYVPDLLVLFNEHIQLGSEVELLCRALLFLLRIHFGRITSNQLLVTVIENLKKT
TISKVSEVRNVLGFNMAGLQFLKREIEAKDEVTFFADATDRFEEKRRKRKKREKLVLTMV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacatcacctggagcatcaaggtcagcccccacctgaaactggaaattgcacc
atgggtctcaccaagcaatatctgcgctacaccgccagtgcactgtttggggtgattgct
agccagaaaggcaacatcgtctatgtgaccctgcggggcgagaagggacgatatgtggca
gtgccagcatgtgagcatgtcttcatctgggacacccggaaaggcgagaaggttctcatc
cttcagggtctcaagcatgaggtgacttctctctgcccatccccagatgggttgcactta
gcagttggatatgaagatggctcgatccgtgtcttcagcctcctaagtggtgaaggaaaa
gtcactttcaatggacataaggctgcagttatgactctgcagtatgatcagctgggaggc
agactggtgtctggctcaaaggacacagatgttatcatatgggatgttatcaacgagagt
gggttgtatcggctgaagggccacaaggatgctgtcacacaggcgcttttcttgagagaa
aagaacctcctggttaccagtggtaaagacacgttggtgaagtggtgggacttggatacc
cagcactgcttcaagacattagttggacaccgtactgaggtgtggggactggcttttgtg
tccgaagagaagcgtctcatcactgggactgcagacagtgagctcagggtgtggaacatc
acttacacccaagaggcaacagaccctaatgagccagaatccaagaaaagcaaagggact
ccagctagagcagaagagacctctgaagtggatgagacctcagacctggaagagacacca
gaggagcgactcctgaggtgcaacaaagttggctccatcatgcgggaaggaagggaccga
gtagtaactcttgccactgaccggacaggcaggatcctagcctgccatggaactgactct
gttctggaagtgttttgtgtcctttctgaggatgaaattcgcaagaaaatggaaaagaag
atgaaaaaagccaggaaaaaagccaaacagaaatctgaggaggaagaggcgcctgaagga
agtgttgagatgagtctgcaagaagagattcagcgagtcactagcatcaaagcttctgct
aaaatcaagtcgtttgacttgattctctctccaaaaggagagctgaaggccaccttgatg
ctccagaacaacaccattgagtcatacatcctgaacccatctgcacaagtcacccaagtt
gtcagagcatccaagatcaccattggaggtcaccacagtgatgtcaggacgctggctttt
agctctgataacattgccatcctttcagctgctgctgactctgttaagatctggaacagg
tcgaccctgcagtgtatccggaccatggcatgcgaatatgcgctttgctcactctttgtc
cctggagatcggcaggtcatcataggaactaagacagggaagctgcagctgtatgatttg
gcctccgggagtgtgctggagaccgttgctgcacatgatggggccctgtggtctatctct
ctttcaccagaccagcgtggcttcgtaacaggaggtgctgataaatgtgtcaagttttgg
gattttgagttggtgaaggatgagaacagcacacaaaagaggctctccatgaagcagacg
cgcatcttgcagctggatgaggacgttctctgtgtgcgttacagccccaaccagaagctg
ctggctgtctccttgttggactgcaccgtgaaaatcttctacaccgatacgctcaagttt
ttcctgtccctgtatggacacaagctgccagtgctctgtatggacatctcctatgacggg
gctctaattgcaactggctctgctgacaggaatgtgaagatctggggcttggactttggt
gactgtcaccggtccctctttgcccacgatgacagcgtgatgacccttcagtttgtgccc
aagtcccatctcttcttcacggcggggaaggaccacaagattaagcagtgggatgcggat
aagtttgagcacatccagaccctggagggacaccaccaggaggtgtggtgcttggcgctt
agtccgaatggagattacgtcgtgtcatcatctcatgataaatctttacgcctctgggaa
aggacgagggagccactcatcttggaagaggagagggagatgcaacgggatgtggagtac
gaggagagtgtggctaaggaagagcagcctgtggtggctggcgagacccaaggagagacc
ggattagcaggcaagaaaaccatcgaaactgtcaaagcggctgagcggatcatggaagct
gtcgagctgtacagagaagaaactgcaaaattaaaggagcaccaggccatatgtaaagct
gctgggaaagaggttccccttccagtcaatcccatcctacgggcctatggaaacatttca
ccctcagcgtatgtgctagaagttttcaagaaagtcaagtcaagtgagttggaggagtct
ctgctggtgctgcccttctcgtatgtgcctgacctgcttgtgctctttaatgagcacatc
cagctgggctcggaggtggagctcctttgccgcgctctcctcttcctgctcaggatacac
tttgggcgcatcacaagcaatcagctgctcgtgacagtgatagagaatctgaagaaaacc
accatctccaaagtcagcgaggtcaggaatgtgctgggctttaacatggctgggctgcag
ttcctgaagagagagatagaggccaaggatgaggtgactttctttgctgatgccactgac
cgttttgaggagaagaggaggaagaggaagaaaagagagaagctggtgctcacgatggtt
tag
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integrated database retrieval system
