Pelodiscus sinensis (Chinese soft-shelled turtle): 102449970
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Entry
102449970 CDS
T02980
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102449970 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pss04990
]
102449970 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
pss04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102449970 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102449970
NCBI-ProteinID:
XP_006112008
Ensembl:
ENSPSIG00000006985
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MRIHLLSGTSPSASNTMSNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLSDSGKAARANV
GIGDVVLTIDGTSTEGMTHLEAQNKIKACTGNLNMNLQRVASAPKPDPVVVQKGEPKEVV
KPVPIASAVAPKVTSTMNLAYNKTPRPFGVVSSSKITSIPSPSSAFTPAHATVPSSASPP
PLATVTPPPFTASGLHVNAKSSTDQRSPALNAAKTAVNVTWQPNTYNTTMNTYSNDNAQD
VAEGQRRGVKESQVDNKQQNGPPRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTG
TTQSRSFRILAQITGTEHMKEPETESTKKTKESQTENGDLSMSAVLPNEIEAQYSSFNLN
KHSVATQTVKISAASEPSSTPLPAIRPESTSFSSPLAESSAVIVPSARLSGYVVSTSPHE
RKLLFDNPLEALPKCAPHPPAIVQVLNISSQVATLSKVASTYIRKISQSAELSAPGPATL
MTNEAGKGSSLSCKHTVATQTSEQSLLAVVSVEPPSAGQPVESVPSVPNRHDVFVPSEKT
SPFDKVASSQTRSSLNHTSQSFYIKKALPENPLEDLPKFSPIPVPSSRQSSKNMSGAAAT
VSAAVAVRARLSDLNVYRSLLDALLITPITKPPPLQSVRPARKSTSALELKKNESDSLEA
SQPVAYTAASVRSMPASPGKTETSPAAANIKMGTAFKPTGSQSSVKYSGWQPSNQAAPAS
GWTSNNITPSGATAPSDKSVIQPPLEEQDTLVQRAEHIPAGKRTPMCAQCNQVIRGPFLV
ALGKSWHPEEFNCAHCRTSMAYIGFVEEKGSLYCEVCYEKFFAPECSRCQRKILGEVINA
LKQTWHVSCFVCVACNNPIRNNVFHLEDGDPYCETDYYALFGTMCYGCEFPIEAGDRFLE
ALGHTWHDTCFVCSVCCDSLEGQTFFSKKDKPLCKKHAHSMNF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaggatacatttattatctggaactagtccttcagcatccaacaccatgagcaactac
agtgtgtctttggtcggccctgctccttggggttttagacttcaaggtggaaaagacttc
aacatgcctctgaccatctctaggttaagcgattctggcaaggcagctcgagcaaatgtg
gggataggtgatgtggttctcaccattgatgggacaagtacagaggggatgactcatctg
gaagcacaaaacaagatcaaagcatgtacaggaaatttgaacatgaatctgcaaagagtg
gcctctgcaccaaaacctgatcctgttgttgtacaaaagggagaacctaaagaagtagtt
aagcctgtgcccattgcatctgctgttgcacctaaagtcacttccacaatgaacttggcc
tacaataagacaccaaggccatttggagttgtatcttcctcaaaaatcacttccattcca
tcaccgtcatctgccttcaccccagcccatgcgactgttccatcatctgcttcccctcca
ccattggccactgtcactcctcccccattcactgcatctggactgcatgttaatgccaaa
tccagtactgaccagcgttcgcctgcactgaatgctgctaaaactgcagttaatgtcaca
tggcagcccaacacatacaatacaaccatgaacacgtattccaacgacaatgcccaggat
gtggcagaggggcaaagaagaggagtcaaagagagccaggttgacaataaacagcaaaat
ggtccaccaaggaagcacattgtggatacctatacagagttttaccacacacccactcat
agtgatgccagcaaaaaacgattgattgaagacactgaagactggcacccaaggacagga
acaacccagtcacgttcttttcggatccttgcccaaatcaccggcaccgaacacatgaaa
gaaccagaaactgagtctacaaagaaaacaaaagagagtcaaacagaaaatggagacctc
agcatgtctgcagttctacctaatgaaatagaagcccagtattcctctttcaatttaaat
aaacattcagtagctactcagactgtcaagatatcagctgcatcagaaccttcgtcaact
cccttaccagcaataagaccagaatcaacttcattcagttcaccattagccgagtcttca
gctgtcattgttccctctgccagactttctggatatgttgtctcaacttcaccccatgag
agaaaactcttgtttgacaaccctttggaggccttacctaagtgtgcacctcatccacct
gctattgttcaggttttaaatatcagtagccaggtagccacactgtccaaggtggcatct
acttacattaggaaaatatctcaatctgcagagttgagtgctccaggtccagccacctta
atgacaaatgaagctggtaaaggaagttctctatcttgtaagcacacagtagctacacag
acctctgagcaatccttgctcgcagttgtatcggtggagccaccttctgcaggccaacca
gtggaatccgtgccttctgtgcctaacaggcatgatgtgtttgtcccttctgaaaaaaca
agcccttttgataaagtcgcaagctctcagactagatcatctttgaatcatacaagtcaa
agcttctacattaaaaaagcactgcctgaaaatccattggaagatctgccaaagttttct
cccatccctgttccttcttccaggcagagctcaaaaaacatgagtggtgctgccgccact
gtgtctgctgctgttgctgtacgggccagactctctgatcttaacgtctaccgttcgctc
ttggatgcccttctcatcacgcctatcactaaacctcctcctctacaaagtgtcaggcct
gcaaggaaatcaacaagtgctttggagttgaaaaagaatgaaagtgattccctggaggct
tcacagcctgttgcttataccgctgcctcagtgaggagcatgcctgcaagcccaggcaaa
actgaaactagtccagctgcagccaatatcaaaatggggacagcctttaaaccaactgga
tctcagagttctgtcaaatactcaggctggcaaccatcgaaccaagcagctcctgcaagt
ggatggacatcaaacaatattacaccgtctggcgcaactgcaccaagtgacaagtctgtg
atacaacctccgctagaagaacaagacactttggtccagagagcagagcatattccagca
ggaaagcgtactcctatgtgtgctcaatgtaaccaggtcattaggggacctttcttggtg
gctttagggaaatcctggcatccagaagagtttaactgtgctcactgcagaacttctatg
gcttatattgggtttgtggaagagaaggggtctctctattgcgaggtctgctatgagaag
ttctttgctcctgaatgttctcgatgccagaggaagatacttggagaagtaatcaatgct
ttgaaacaaacttggcacgtttcctgttttgtatgtgtggcctgcaataatcccattcgc
aataatgtcttccatttggaagatggggacccctattgtgagacagattactatgccctc
tttggtaccatgtgttatggctgtgaattccccattgaagctggagacaggtttcttgaa
gccttgggccacacctggcatgacacctgctttgtgtgctcggtatgttgtgacagtttg
gagggtcagacattcttttccaaaaaggataagccactgtgcaagaaacatgctcactca
atgaacttctga
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