Pelodiscus sinensis (Chinese soft-shelled turtle): 102450093
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Entry
102450093 CDS
T02980
Symbol
FN1
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin
KO
K05717
fibronectin 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04518
Integrin signaling
pss04810
Regulation of actin cytoskeleton
pss04820
Cytoskeleton in muscle cells
pss05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102450093 (FN1)
04518 Integrin signaling
102450093 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102450093 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102450093 (FN1)
04810 Regulation of actin cytoskeleton
102450093 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102450093 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102450093 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102450093 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102450093 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
pss04990
]
102450093 (FN1)
Membrane trafficking [BR:
pss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
102450093 (FN1)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
102450093 (FN1)
Glycosaminoglycan binding proteins [BR:
pss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102450093 (FN1)
Domain-containing proteins not elsewhere classified [BR:
pss04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
102450093 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Fn3_VIN3
FN3_Tor_3rd
VWC2L_1st
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
102450093
NCBI-ProteinID:
XP_075790073
Ensembl:
ENSPSIG00000015987
LinkDB
All DBs
Position
7:complement(61037480..61108589)
Genome browser
AA seq
2480 aa
AA seq
DB search
MHSSPGWPLLLLALVVGAGAHGEQPRTTKARRQAQQIAQPPVPSSQNKQGCYDNGRHYQI
NQQWERTYLGRMLVCTCYGGSRGFNCESKPELEETCFDKYTGSTHRVGETYERPKDSMIW
DCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKP
VAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTTTSYR
IGDTWSKKDNRGNLLQCICTGNGRGEWKCERHSAVQTTGIGSGSPTFTDVRTALYQPQPQ
PPPYGHCVTDSGVVYSIGMKWLKTQGSQQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCV
LPFTYGGRTFYSCTTEGRSDGHLWCSTTSNFEQDNKYSFCTEQNVLVQTRGGNSNGALCH
FPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRVG
DHWDKQHDMGHMMKCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKRHEEGHML
NCTCFGQGRGRWKCDPVDQCQDSESRTFYQIGDSWEKHVHGVRYQCYCYGRGIGEWHCQP
LQAFPGATGPVQVIITESGSHPNSHPIQWNAPETSHISQYILRWRPKNKRALWKEAIIPG
HLNSYTISGLKPGVQYEGQLVSVQQYGPKEVTRFDFTTTHITPISTNTLSGETTPFSPVV
XTSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGAEPQYLDLPSTATSVNIPDLLP
GRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHNVDRVDDTSIVVSWSRPQAPITGYR
IVYTPSMEGSSTELNLPDTATSVTLSDLMPGVQYNITIYAVEENQESTPVFIQQETTGVP
QKDDVPSPKDLQFVEVSDVKITIIWTPPSSTVSGYRVDVIPVNRPGVHGQKLPVTRNYFA
EVTDLLPGTTYLFKVFTVLQGRESKPLTGEHTTKLDAPTNLRFENLTDSAVLVAWTPPRA
PITGYQLTAGPTRGGQPKQYNVVPSATNYQLKNLQPGSEYTVYLVALKGNQQSNRQTGIF
TTLQPMSSIPPYSTEVTETSIVVTWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIVISG
LTPGVEYVYSISVLMDGQDRDTPIIKRVTTPLSPPTNLHLEPNPDTGILTVSWDRSTTPG
VTGYRVTTVPTSGQQGYTLEEVVSAEQTSCIFENLSPGLEYNVSVYSVQDNKESVPISKT
ITQEVPQLTDLSFVDITDTSIGLRWTPLNASTIIGYRITVVAAGDSVPIFEDFVDSSVGY
YTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPAPTDLRFTNVRPDTMRVTWTPPV
SIELTSFLVRYSPVKKEDDVAELTISPSDNMVVLTNLLPGTEYLVKVYSVYEQHESTALT
GVQKTGLDSPTGIDFSDITANSFTVHWIAPRAAITGSKIRHHLEQGGGRPKEDRVPPSRN
SITLTNLVPGSEYVVSIIAVNGKEESLPLVGQQTTVSDVPRDVEVTATGPTSLVISWDAP
AVTVRYYRITYGETGGSGPIQEFTVPGTSSTATISDLKPGADYTITMYAVTGRGDSPASS
KPVTVTYKTEIDTPSQLQVTDVQDNSISVRWLPSTSPVTGYRVTTVPKDGHGPVKSKNVP
ADQTQTTIEGLQPTVEYVVSVYAQSQNGESLPLVETAITNIDRPRGLTFTEVDVDSIKIA
WESPQGQVTSYRVTYSSPEDGIRELVPAPDGEDDTAELHGLRPGSEYTVTIVALHDDLES
QPLTGTQSTAIPPPTNLQFVQVTPTSLKVNWNAPSVRLTGYRVRVNPKEKTGPMKEINLS
PDSTFAVVSGLMVATKYEVSVYALKDSLTSTPAHGVVTTLENISPPRRARVTDATETTIT
ITWRTKTETITGFQVEAVPADGQSPIQRTITPDVRTYTITGLQPGTDYKIYLYTMNENAR
SSPFVIDASTAIDAPSNLRFLTTTSNSQLITWQPPRAQITGYIIKYERPGAQPKELIPRP
RAGTTEATLTGLEPGIEYTIYIIAVKNAQKSEPLVGRKKTDELPKLVTLPHPNQGGPEIL
DVPSTVERTPYLTNRFDNGNGIQLPGTSGQQTLGNQGQQVFFEEHGFRRTTAPTTATPIR
HRPGLQTPDVDEEIDLGNRYSIQRVDLVQPSFPHSLGPRRNDTTGQEALSQTTISWRPLL
ESTEYVISCQPVGTDEEPLQFRVPGTSSSATLTGLTRGATYNIIVEALKDRRRHKVLEEV
VTVGNAVSEGVNQPSDDTCYDTYTGSFYSIGEEWERLSDTGFKLWCQCLGFGSGHFRCDS
SKWCHDNGVSYKIGEKWDRQGETGQMMSCTCLGNGKGEFKCDPHEATCYDDGKMYHVGEQ
WQKEYLGAICSCTCYGGQQGWRCDNCRRPGAEAAPDGTAGHSYTQFSQRYHQSTNTNVNC
PIECFMPLDVQADRQHRPGK
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcagcccgggctggccgctgctgctcctcgccctggtcgtgggggccggggcg
cacggcgagcagcccaggacgaccaaagccaggcggcaagcgcagcagatcgcccagccg
cccgtgccaagcagccagaataaacagggctgttatgacaatgggagacattatcagata
aaccaacaatgggaacgcacttacctggggagaatgcttgtctgtacctgctatgggggg
agcagaggctttaactgcgaaagcaagcccgaacttgaagaaacgtgtttcgacaaatac
actggatctacccatcgggtcggggagacttatgagcgccccaaggactccatgatctgg
gattgtacctgcatcggggctggccgggggaggatcagctgcaccattgcaaaccggtgc
cacgagggcggccagtcctacaagattggcgacacctggcgcagacctcacgagacaggg
ggctacatgctcgaatgcgtgtgtctgggcaacggaaaaggggagtggacctgcaagcct
gtagctgagaggtgctatgacaacacggctggcacatcctatgttgtcggagagacctgg
gagaagccctaccaagggtggatgatggtggattgcacttgcttaggcgaaggcagcggg
cgaatcacctgtacctctcgcaatcggtgcaatgatcaggacaccacgacttcgtacaga
attggagatacctggagcaagaaggataaccgaggaaacctgcttcagtgcatctgcacc
ggcaacggcagaggcgagtggaaatgtgagaggcactcagctgtgcaaaccactggcatt
ggatccggatccccgaccttcacagatgtacgaacagcactttaccagccccagcctcag
cccccgccctacggccactgtgtcaccgacagcggggtggtgtactccattggcatgaag
tggctgaagacgcagggcagccagcaaatgctttgcacttgcctgggcaatggagtcagt
tgccaggagacagcggtgacccaaacctatgggggcaattccaatggggaaccatgtgtt
ctgccgttcacctatggagggaggaccttctattcgtgtactaccgaagggcgctcagac
ggacacttgtggtgcagcacaacctccaacttcgaacaggacaacaaatactccttttgc
acggaacagaatgttctggtccagacccggggtggcaactccaatggtgccttgtgccac
ttccccttcctgtataacaatcgcaactacaccgactgcacgtcagagggacggagagac
aacatgaagtggtgcggcaccacccagaactatgacgctgaccagaagtttggcttctgc
cctatggctgcccatgaggaaatctgcacaaccaacgaaggcgtcatgtaccgtgtggga
gaccattgggacaagcagcacgacatgggccacatgatgaaatgcacgtgtgtcggcaat
ggccgcggcgaatggacctgcattgcctactcccagctcagagaccagtgtattgttgat
ggcatcacctatgatgtcaaccagacattccacaagcgtcatgaagaaggacacatgctc
aactgtacctgctttggccagggtcgtgggagatggaaatgtgatcctgtcgaccaatgc
caggattcagaatcccggaccttttatcaaatcggggattcgtgggagaagcacgttcat
ggcgttcgataccagtgctattgctacggccggggaattggagagtggcattgtcaacct
ctgcaggcctttccgggtgctaccggccctgtgcaagtgataatcaccgagagtggcagt
catcctaattcccatcctatccagtggaacgcacccgaaacctctcacatttctcagtac
attctccgatggagaccgaaaaacaagagagcgctttggaaagaagccatcatcccaggt
cacttgaactcctataccatctcagggctgaaacctggtgtgcagtatgaagggcaactt
gtcagtgtgcagcagtatggacccaaagaggtcacgcgcttcgattttaccaccactcat
atcacacccatttctaccaacaccctttctggcgagacaactcctttttctcctgtggcc
acgtctgagtcggtcaccgaaatcacagcaagcagctttgtcgtctcctgggtttccgcc
tctgacaccgtctcaggattccgtgttgagtacgaacttagcgaggagggggctgagcca
cagtatcttgatctcccgagcacagccacctccgtgaacatcccagatttgctgcctggg
cgcaagtacatcgtcaacgtttaccagatctcagaagaaggggaacagaatctgatcctg
tcgacttcccagacaacagcacccgatgcacctcccgagcataatgtggaccgagtcgat
gacacctcgattgtcgtgagctggagcagaccacaggcccccatcacaggttacagaatt
gtctataccccctccatggaaggcagcagtactgaactcaacctgcccgacacggctacc
tcggtgaccctcagcgacttaatgcccggggttcagtataacatcaccatctatgctgtg
gaagaaaaccaggagagcacgcccgtcttcatccagcaggaaaccaccggcgtcccacag
aaagatgatgttccttcacccaaggacctacaatttgtggaagtttccgatgtcaaaatc
accatcatatggaccccaccctcaagcacagtgtctggctatcgggtggacgtgatccca
gttaaccgacctggagtgcacggacagaaactacctgttaccaggaactattttgctgaa
gtcactgaccttttacctggaacgacctatctcttcaaggtctttacagtgcttcagggc
agggagagcaagccattgacgggagagcacacaaccaaacttgatgctcctaccaatctg
aggtttgagaaccttactgattcagcagtgttagtggcctggactccgccccgcgcgcct
atcacggggtaccagttgactgcaggtcctacaagaggaggccaaccaaagcagtacaac
gtggtgccatctgccaccaactaccaactcaagaacctgcagccgggctcggagtacaca
gtctacctcgtggcactgaaaggcaaccagcaaagcaaccgacaaactggcatcttcact
actttgcagcccatgagctccatccctccctatagcaccgaagtgacagaaacgtctatt
gttgttacctggacacctgcgccaaggattggcttcaagctgggtgtgcgaccgagtcaa
ggtggagaagccccccgggaggtgacatctgagtctgggagcattgttatctctggcctg
actcctggagtggagtatgtctacagcatttccgtcctgatggacggccaggacagagac
acgccgatcatcaaacgagtaactacacctctgtccccaccaacgaacctgcatctggag
ccgaaccctgacactggaattttgactgtctcttgggatagaagcacaactccaggggtt
actgggtacagagttaccaccgttcctaccagcgggcagcagggttacaccctggaggaa
gtggtcagtgccgagcagacttcctgcatcttcgaaaacctgagccccggcctggagtac
aatgtcagtgtttattctgtccaggacaacaaggaaagcgtccccatctccaaaaccatc
acgcaagaggtgcctcagctcactgacctaagctttgttgacataactgataccagcatc
ggcctgaggtggaccccgctaaatgcctccaccattattggttaccgcatcacggtagtt
gcggcgggagacagtgtccctatttttgaagattttgtggactcctcagtaggatactac
acggtgacaggcctggagccgggcattgattacgacatcagcgtaatcacactcattaat
ggcggagagagcgcccccaccactctgacacagcaaacggctgttcctgctccgacggat
ctgcgcttcaccaacgtgaggcccgataccatgcgggtaacctggacccctccagtctcc
atagaactgaccagtttcctggtgcgttactcacctgtgaagaaagaggacgatgttgct
gagctcaccatttcaccctccgacaacatggtggtcttaacaaatctgctgcctggcact
gaatatctggtgaaggtctacagtgtctatgagcagcatgagagcactgctctgactggc
gtgcagaaaacaggtcttgattctccaactggcattgacttttcggatataactgccaac
tctttcactgtgcactggattgctcctcgcgccgccatcaccggctccaaaattcgccac
catctggagcagggcggcggtcggcccaaagaagaccgcgtgccaccgtctcggaattcc
atcaccctcaccaacctggtgccaggctcggagtacgtggtcagcataattgctgtcaat
ggcaaagaggagagcttgcctttggttggccagcaaactacagtgtccgacgttccccgg
gacgtggaagttactgccactggccccaccagtctggtgatttcctgggatgcgcctgca
gttactgtgagatactacaggatcacctatggtgaaacaggaggcagtggccctatccag
gagtttaccgtgccgggcacttcgtccactgccaccatcagcgacctgaagcccggagca
gactataccatcaccatgtatgcagtgaccggccgtggagacagccctgccagcagcaag
ccagtcaccgtcacgtacaaaacagagatcgacacgccgtcccagctgcaagtgaccgac
gttcaggataacagcatcagtgtcagatggctgccttcgacttctccggtcacgggctac
cgagtgacaaccgtccccaaggatggccatgggcctgtgaaaagcaaaaacgtcccagca
gatcaaacgcaaaccaccatcgagggcctgcagcccacagtcgagtatgtggttagtgtc
tacgctcagagtcaaaacggagagagcctcccgctggttgagacggccatcaccaacatt
gaccgccctagaggactgacattcacggaggtggatgtcgattccatcaaaattgcttgg
gaaagcccccaagggcaagtcaccagctacagggtgacctactcaagccctgaggatgga
atccgtgagctagtgcccgcccccgatggtgaagacgacactgctgagctgcatggcctc
aggcccggttcggagtacactgtcaccatcgttgccttgcacgatgacctggagagccag
cccctgaccgggacccagtccacagcaattcctccacccacaaacctgcagtttgttcag
gtaactcccaccagcctgaaagtcaactggaatgcgcccagtgttcgtctcactggctac
agagtgcgagtgaatcccaaggaaaagacggggcccatgaaagaaatcaacctctcccca
gacagcacgtttgctgttgtgtcaggattaatggtggcaaccaagtatgaagtcagtgtg
tacgctctgaaggactctctgactagcacgccggcccatggtgtggtcaccacccttgag
aacatcagccctccccgcagggcccgtgtgacagacgctaccgagacgaccatcacaatc
acctggcgcactaagaccgagaccatcaccggtttccaggtggaagccgtgccggcagat
ggccagagccccattcaacggaccatcactcctgatgttagaacctacaccatcaccggc
ttgcaaccaggcacggactacaagatctacctttacaccatgaatgagaatgcccgcagt
tcccctttcgtgattgatgcttccaccgccatcgatgcgccttccaacctgcggttcctc
acaaccacaagcaactcccagctgattacttggcagccgccccgggcccagatcacaggt
tacatcatcaaatacgagagacctggcgcacagcccaaggagctgatcccacgccctcgc
gctggcaccacggaggccactctcaccggtctggagccaggaattgaatataccatctac
atcatcgctgtgaagaatgctcaaaagagcgagccactggttggcaggaaaaagacagac
gagctcccgaagctggtaaccctgccgcatcccaaccaaggtggaccggagattctggac
gtgccttccaccgtggagaggacaccttatctcaccaacaggtttgacaatggaaacggt
atccaacttccaggcaccagtggccagcaaacgctaggaaaccagggacaacaagtcttt
tttgaggaacacggctttagaaggaccaccgctcccaccacggcgacccccattcggcac
cggccgggcctgcagaccccagatgtggatgaagagattgaccttggtaacaggtactca
atacagagagtggacttggttcagccttcattccctcactcactagggcccaggcgcaat
gacactacaggccaggaagctctctctcaaacaaccatctcttggaggcccctgctggag
agcactgaatacgtcatctcctgccagccagtgggcactgatgaagaacctttacagttc
agagttcctggaacttcctcgtctgctacactgaccggcctcacccgcggggccacttac
aacatcatcgtggaggcattgaaagatcgcaggaggcacaaggtgttggaagaggtcgtc
accgtaggcaatgcggtgtctgaaggtgtgaaccagccatcggacgacacctgctacgac
acatacactggctccttctactccatcggcgaggaatgggagcggctgtctgatacgggc
ttcaaactctggtgccaatgtttaggctttggcagtggtcacttcagatgtgactcctct
aaatggtgccatgataacggagtgagctacaagatcggggagaagtgggaccgccagggc
gagactggccagatgatgagctgcacatgtcttggcaacggaaaaggagaattcaagtgt
gacccacatgaggccacgtgctatgacgatgggaagatgtaccacgtaggagaacagtgg
cagaaagaatacctgggtgctatctgctcctgtacttgttacggaggacagcagggctgg
cgttgtgacaactgccgcagacctggtgcggaggcggcccccgacggcactgctggccac
tcctacacgcagttttcacagagataccaccagagcacaaatactaatgtcaattgcccg
attgagtgcttcatgcccttggatgtgcaggccgacagacaacatcgaccgggaaagtaa
DBGET
integrated database retrieval system
