Pelodiscus sinensis (Chinese soft-shelled turtle): 102450096
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Entry
102450096 CDS
T02980
Symbol
RPAP1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102450096 (RPAP1)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102450096 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
102450096
NCBI-ProteinID:
XP_006128759
Ensembl:
ENSPSIG00000015009
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MLSRPKPGESEADLLHFQNQFLAAKASPAVKIVKKVDKRRGAGGSAEEETPPLHGDRDVV
ILDDFPDVLPALMPAPPKKAKFKNTFVHFEDEDPEQRLECHDRHITAVFSKIIERDTSSA
AVTMPIPTGDPFPRAFHRSEIKNEMESGGKSIFARKIAAKRAAEQSVTAPPAVETGHTHR
RAAVPGAICSPGSAEKEPLHSSKAGKSGGDMSTLQPRIITGEGLGSLESEQEALAIHKEN
LQKLHSMTQEEILQEQRRLLVQLDPTLVAFLKSRRGVDEGHESRTKPGDPEPGSESQHGA
KETLEDFSVEGSGVEVSVKTEEDKRMEIAEVDLPIKPQKEWIHMDSVELEKLEWTKDLPH
PRQRRTKKGMQARFSLKGELIPPDADLPTHLGLHHHGEEAERAGYSLQELFHLCRSQIIQ
QRTLALQVLGHVVQKAKAGEFAASLKGSVLRLLLDAGFLFLLRFSLDDTVDNVIAASVRA
LHALLVSPEDEEYLDQTFSWYQGMAVFPFIPNREGGEEEEEEEEEWTPMEKTQGEKSKDE
NKPDPVVAQYDVIKGLLKTQILHRLRYILEVLRPVSTVVLDILDILTRVARHSSEACSQL
LACPRLIETIVREFLPTQWDPRVAEPGHLLTSLHGVACATAMKLIRVLASGGRNATARLL
NKFELKSRLSRFIAEDPQDLPLRREEAIRLSTEAFRLWAVAASYGQSCDLYRDLYPVLVK
NLQSLPHLLSECQDYLTLPLSIQRATAIVTLLTQVTQTAGCTAELQARLSSSGPGEGEQI
PPPPVTWSQVSGLRPFIESSLRRSLQEISKLETWQALQPLTTTYIIYMGVYYSVCSQQPS
INPIDCLEEVEHLTFEVLLPLISQPAMHSMWDLLRQCSALCNPLYCASAPESVPSIVSLN
CTGGKPLMNLAGSKSPFPFLTALLFLINNVTHIHKELVSKYTAVLDFKGLKDYLLQSWPT
RAPSVTPSSAWILRHEYHLQYFVLALAQKMADTCPDYTQHASLHHSVAMALLSRLLPGSE
HLAHELLLGVAFNPAFIPEGKTGGPEAADFSDILHLGPNMNLAQPGSMAADFPKPQRGAL
LRESYQHLRFIRACYLSQFVHLEPALARSQVTYQGRTYLVQSLLLPEVKGPILPSDWPFF
PLINLYNKVTSAETLGTVTNSLPLDLVNTVTRNLQWVLLLETWRASVLQSIPAAAKLARL
MCVFLTGGDLFLEGPVHCYTAALLALYCQPKVLDSLELDAPLPGLASFHDLYISLLEQFE
GVSFGDPLFGAFVLLPXXXXXFGEHASTLRALGVSLRQFPVPLERYTSPPEENLNLLQLY
FRSLVTGALRHSWCPVLYAVAVAHVNSFLFSQDSTTQEADTARKSMLWKSWLLVDEVLKK
HLLYYKLPNTESPMGFDLYETLPPIRLKYLQIVTKSEPKENIQISGP
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaagaccaaaacctggagaatctgaggcagacctgctgcattttcagaaccaa
ttcctggcagcaaaggcttccccagcagtgaagattgtgaagaaagtggataagaggaga
ggagctggtggcagtgcagaagaagagacacccccactgcatggggacagggatgtggtg
atattagatgactttcctgatgtgcttccagcccttatgccagcacccccaaagaaagcc
aagttcaaaaatacctttgtccactttgaagatgaggatccagaacagagattggagtgt
cacgatcgacatatcacagcagtcttcagtaaaatcattgaacgtgacactagctcggca
gctgtgaccatgcccatacccactggagatccatttcccagagcatttcaccggtctgaa
ataaaaaatgagatggaatctggaggaaaaagtatctttgcacggaagatagctgctaag
agagcagctgaacagtctgtgacagctccacctgctgttgagactgggcatacacacaga
agagccgcagttccaggtgccatctgttcccctggatcagcagagaaggagccactccac
agctctaaggctggcaaatctggtggtgatatgagcactctgcaacctcgtatcataact
ggagagggtcttgggagcttggagagtgagcaggaagctctggctatccacaaggagaac
ctacagaagctgcactccatgacccaggaggagatcctacaggagcagaggaggctgctg
gttcagctagatcccaccttagttgctttcttaaagtcacgacgtggtgttgacgaaggt
catgagagcagaacgaagcccggagatccagaacctggatctgaatcccagcatggtgca
aaggaaactctggaggatttctctgtagagggctcaggtgtagaagtgtctgtgaagact
gaagaagataaaagaatggaaattgcagaagttgaccttccaatcaagccccagaaagaa
tggatccacatggacagtgtggaattggaaaagctggaatggacaaaggatctgccccac
ccaaggcagaggagaaccaaaaagggaatgcaagcacgatttagtttgaaaggagaattg
attcccccggatgctgatttacctactcatctgggtctacaccatcatggagaagaagca
gaaagggctggttactccctccaagagcttttccacttgtgccgcagtcagatcattcag
cagaggacattggcactacaggtgctaggccatgttgtccagaaggccaaggctggggag
tttgccgcctccctgaagggcagtgtcctgcgcttgctgcttgatgccggattccttttc
ttgttgcgcttctccttggacgatacggtggataatgtcattgcggcatctgtccgcgct
ctccatgcactgctggtgtcccctgaagatgaggagtaccttgaccagactttctcatgg
taccaggggatggctgtgttccccttcatccccaacagggaagggggggaagaggaggag
gaggaggaagaagaatggactccaatggaaaagacacaaggggaaaaatcaaaggatgaa
aacaagccagatccagttgtggcccagtatgatgtcataaagggacttctgaagactcag
attcttcatcggctgaggtacattcttgaggtgttgcgacctgtctccacagtagttctg
gacatcctggatattctcacccgggtagcaaggcactcctcggaagcatgcagtcagctc
ctggcctgtcctcgactgattgagaccatcgttagggagtttctccctacccagtgggat
ccccgggttgctgaaccagggcacttgctcactagtctccatggagttgcatgtgccact
gccatgaagttaatcagagtcctggcatctggggggaggaatgcaacagccagactgctt
aataaatttgagctgaagagtcgactcagtcgttttatagcggaagatccccaggacttg
cctctgcgcagggaggaagccataaggctgagcactgaggctttccggctgtgggctgtg
gctgctagctacggtcagtcctgtgatctctacagggatctctaccctgtgctggtgaag
aatcttcagtcactgccccatttgctcagtgaatgccaggattatcttacacttccactt
tctatccaacgagctacagctatagtcaccctgctgactcaagtgactcaaacggcaggc
tgcacagcagagctgcaggcccggctcagcagcagtggccctggagagggagagcagatt
cctcctccaccagtcacctggagtcaggtgtcaggcctaagacccttcatagagtccagt
ctgaggaggtccctccaggagatatctaagttggaaacatggcaggctctccagcctctt
acgacaacttacatcatctacatgggggtttactacagcgtttgcagccaacagccatca
ataaatccaattgactgcctggaagaagtggagcatttgacatttgaggtgctgctgcct
ctcattagccaacctgccatgcacagcatgtgggatctgctaaggcagtgctctgcgcta
tgcaatcccctgtactgtgcctcagcacctgagtctgtccccagcattgtgtctttgaat
tgcactggagggaaacccttgatgaatttggctggttccaagtcacccttccccttcctc
actgccctccttttcctcatcaacaacgtcacccatatccacaaagagctggtcagcaag
tacaccgctgtgctagacttcaaaggtctgaaggactacctgctacagagctggcccacc
agagctccctccgtaaccccttcatctgcctggattctgcggcatgaataccatctgcag
tactttgtactagcattggctcagaaaatggcagacacttgtccggattacacccagcat
gcctcactccatcactctgttgccatggcgttgttaagccgtctgttgccagggagtgag
catcttgctcatgagctccttttaggtgttgcctttaatccagcattcattccagaaggg
aaaactggagggccagaagctgctgatttctctgatattctacatctgggcccaaacatg
aacctggcacagcctggttcaatggcagctgattttcccaagccccagcgcggtgcattg
ctgagagaatcataccaacatctccgtttcattcgtgcctgttacctttctcagtttgta
cacttggagcctgctcttgcccgttcccaggtgacctaccaagggcgaacttaccttgtc
cagtcattgctgcttccggaagtcaaagggcccatcctaccttcggactggccattcttt
cctcttatcaacctctacaacaaagtgactagtgcagagacgctggggactgtaacaaac
tctctcccactagatctagtgaacactgtgactcggaacctgcagtgggtcctgctcctg
gaaacctggcgtgccagtgtacttcagagcatcccggctgctgccaaactggcacgactt
atgtgtgtgttcctcacaggcggtgacctgttcttagaaggacctgtccattgctacaca
gctgcccttctcgctctctattgccagcccaaagtcttggactccctggaattggacgca
cctctcccgggcttggcgtcattccatgacctatatataagtctcctggagcagtttgaa
ggggtctcctttggtgaccctttgtttggagcctttgttctcctccctnnnnnnnnnnnn
nnttttggagagcatgcgagcaccttgagagccctgggagtgtcactcagacagtttcct
gtgccattggagcggtacacctcacctcctgaggagaacctgaatctcttgcaactgtat
ttccgatcactggtcactggtgcgctgcgtcatagttggtgccctgttctttatgctgtg
gctgtggctcatgtgaacagcttccttttctcccaggatagcacaacacaggaggcggat
actgctcggaaaagcatgctatggaagtcctggctgttggtggatgaggtattaaaaaag
caccttctctactacaaactacccaacacagagagcccgatggggtttgacctttacgag
acgctccctcccattcgactgaagtacctgcaaatagtgaccaagagcgagcctaaggag
aacatacagatatcaggcccatag
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