Pelodiscus sinensis (Chinese soft-shelled turtle): 102450160
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Entry
102450160 CDS
T02980
Symbol
PCDH12
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-12
KO
K16499
protocadherin delta 2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pss04515
]
102450160 (PCDH12)
Cell adhesion molecules [BR:
pss04515
]
Cadherins
Protocadherins
102450160 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM51
DUF1980
DUF5527
Motif
Other DBs
NCBI-GeneID:
102450160
NCBI-ProteinID:
XP_025039877
Ensembl:
ENSPSIG00000006569
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MFFLSHILLQFLVLYLDFFLCVDCQEVAPFAVQYKVLEEVPSGTVIGKLSEDFGWEERSE
LVETFQQLHFPKKLPVSVRSGDGLLSTAGRLDREQLCRHSDPCLVSFDVLTAVHLALIHV
VIEVLDINDHAPLFPKPKLELEISESASLRTRIPLDRALDPDIGSNALCSYSLSPSNHFA
LDVISGSDGTKHAELVVIKEVDRELHSCFDLVLTAFDHGEPPKSGTTLLRVIVLDSNDNS
PVFAESSLTVEIWEDVLPGTILINLTATDPDQGPNGEIEYSLSKHAPLEVVNMFSIDTKT
GSVVVRLPLDYEENHTYEVDVQARDLGANPIPAHCKILFKILDVNDNAPDVHITWAAQXX
XXXXXXXXXXXXXXXXALVTASDPDSGNNGQVHCYLTQGFEHFKLKRTNSYTYMLLTNAV
LDRERWAEYNLTLMVQDNGDYSLATWKHLTICISDVNDNPPLFERMMYDVTIAENNVPPS
YLVTVKAQDADLDFNGKITYSIQDFFASDLFSVDSKTGEIFALRAFDYEQMASLEFLVTA
EDWGHPKLASNVSVRVNVLDRNDNSPVILQPVLLGGKAKIIFLVNPQTGCLRLSLGNHGP
QSTAVSTMTPTSTSNISLLFTIAASDADSGLNGALHYDILSGNDANLFVLDTFSGHVFLN
SSNASSLIGSEWELEMLVRDQGNSPLQAKALVQLSFQNHLDQLTNSAQEAQRLSPSMVTV
ICIAVLVSTFLLILALIMSICKREKKDNMAYNCREAEHAHRQQQLKKPQKHIQKTDIYLV
PMLRNRQVGQSEAEQVCSYEEALLKDSPLQTPFHFTPTLYRTLRNQKGPAEQKDAFNLPA
IQCRPFHPHRLRNAPKESSSLKTHSKSLENPQLKPLGDHNFDLSLPTTQLSDTTLMRQRI
AAQEVGPREAHPHQHLLQSLVRLSMVALAEQDPTGELAMESPPVQQISQLLSLLHQGQFQ
PKPNHRGNKYTAKNGSRNVGLDTDCLSIKDSCQEDSETDDQDSENGLNLSIHQLVGEELD
SLLEPHAGLALERLTADPSWMARLSLSLTSSYKDNVFSPDSLQSSQDQENAGLDKPRTFE
TFGKVSGSDTNTARTRLASTFLSEMSTLFEMILSQKAQAHATSASGLLQQLCARSKTFEL
DGDAPPVSVIWEG
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctgtcacacattctgcttcagtttttggtattgtacttggactttttcctt
tgtgtggattgccaggaggtggccccctttgcagtgcaatacaaagtgttagaagaagtg
ccaagtggaactgtgatagggaaattatctgaggattttggctgggaagagagaagtgaa
ctggtagagaccttccagcagctgcatttccccaagaaactccctgtcagtgttaggtct
ggagatggtttgcttagtactgcaggacgcttggacagagagcagttatgcaggcacagt
gatccatgcttggtttcttttgatgttctgactgctgtgcacctggctttaatccacgtg
gtgattgaggtcttggacatcaatgatcatgcacccctgtttccaaaacctaagctggaa
ctggaaatatcagagagtgcatctttacgaacacggataccactggaccgagcccttgac
ccagacattggctccaatgccctctgctcttactcattatcacccagtaatcactttgct
ttggatgtaatctctggatctgatggaactaaacatgcagaacttgtagttattaaagaa
gtggacagagagctccactcttgttttgatttagtattgactgccttcgatcatggagaa
ccaccaaaatcaggcacaaccttacttagggtaattgttttagactccaatgataacagt
cctgtgtttgcagagagttctttgacagtggaaatctgggaagatgttttgcctggaaca
attcttataaaccttacagccacggaccctgatcagggtcccaatggggagatagaatac
tcactcagtaaacatgcgccactggaggtggtgaacatgttcagcattgataccaagaca
ggcagtgtagttgtgagactcccactggactatgaagaaaatcatacttatgaagtagat
gtacaagccagggatcttggagccaaccctatcccagcacactgcaagatcctctttaag
atcctggatgtcaatgacaatgccccagatgtgcacatcacttgggctgcccaggnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctctagtgacg
gcaagtgatccagattcaggaaacaatggacaggtgcactgttacctaacacaaggattt
gagcatttcaaattgaaaaggaccaacagctatacttatatgctgttgaccaatgctgtc
ttggacagggagagatgggcagaatataacttgacattaatggtccaggacaatggggac
tactccttggccacgtggaaacacctcactatatgcatcagtgatgttaatgacaacccc
ccattgtttgaaagaatgatgtatgatgtcaccattgctgagaacaatgtgcctccatcc
tacctggttactgtcaaggctcaggatgctgatttagacttcaatggaaaaatcacttat
agcatccaagacttctttgcttcagatttgttctctgttgattccaaaactggtgaaatc
tttgctctcagagcttttgattatgaacaaatggcaagtctggaattcttggtgacagca
gaagattggggtcaccccaaacttgcctcaaatgtttctgttagggtaaatgtacttgat
aggaatgataattccccagtgattttgcagccagtgctgctgggaggcaaagcaaagatc
atttttctagtcaatccacagactggatgcctgaggctatccctagggaaccatggcccc
caaagtacagcagtaagcactatgacaccaacatctacttccaacatttccctgctattc
accatagctgccagtgatgcagattctggtctgaatggggccctccactatgacattctg
agtgggaatgatgccaacttgtttgtccttgatacattctcagggcacgtgtttctcaac
agcagcaatgccagcagcctcattggaagtgaatgggaactggagatgttggtgagggat
caagggaactcaccactgcaggctaaagcccttgtgcagttaagtttccaaaatcatctt
gaccagctgacgaactcagcccaggaggctcagaggctgagcccatccatggtgactgtt
atctgcatagctgtgctagtaagcacttttcttcttattttggctttaatcatgtctata
tgcaaaagagagaagaaagataacatggcctacaactgcagggaagcagaacacgctcac
agacaacagcaactcaagaagcctcagaaacacattcagaaaacagacatatatttagtc
cctatgctcagaaacaggcaagttgggcagagtgaggctgagcaagtttgctcctacgaa
gaagctttgctgaaggacagtccactgcagactccatttcacttcaccccaacactgtac
aggactctacgaaatcagaaaggtccagctgaacagaaagatgccttcaatctccctgca
atacagtgcagacccttccacccacacaggctaagaaatgcaccaaaagagagctcaagc
ctcaagacccactccaaaagcttagagaacccacagctgaagcctctgggagatcataat
tttgacctctccctgccaactactcagctttcagacacaactctgatgaggcagagaatt
gcagcacaagaagtgggacccagagaagcccatccccaccagcacctcctgcaaagtctc
gtgaggctgtccatggtggcacttgcggagcaggatcccacgggagaacttgctatggag
tcacctcctgttcagcaaatctctcagctgctgtctctgctgcaccagggccaattccag
cccaaaccaaaccacaggggaaacaaatacacagccaagaatggcagcaggaacgtgggg
ctagatactgattgcctcagtataaaggacagttgccaagaagacagtgagacagatgac
caggattcagaaaatggactcaatctttctatacaccagctggtgggagaagaactcgac
agtcttctagagcctcatgcagggctggccctagagaggctgacggcagacccttcgtgg
atggctcggctttccctgtccctcaccagcagttacaaggacaatgttttctcccctgat
tctctgcagtcttctcaggaccaagaaaatgcagggttggataagccaaggacctttgag
acatttggtaaagttagtggatctgacacaaacacagccaggacgaggctggccagcacg
ttcctctcagaaatgagcaccctatttgaaatgatcttatcccagaaagcacaggcccat
gcaacatcagcctctgggctcctgcagcagctctgtgcacgcagcaagacttttgagctg
gatggtgatgctcctcctgtgtcagtcatatgggaaggctga
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integrated database retrieval system
