KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102450453
Entry
102450453         CDS       T02980                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42 isoform X1
  KO
K12018  tripartite motif-containing protein 42
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pss01009]
    102450453 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102450453 (TRIM42)
Protein phosphatases and associated proteins [BR:pss01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102450453 (TRIM42)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102450453 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_J_second PilB3_C
Other DBs
NCBI-GeneID: 102450453
NCBI-ProteinID: XP_025046361
Ensembl: ENSPSIG00000004519
UniProt: K7F9X7
LinkDB
Position
Unknown
AA seq 732 aa
MVSMLCLSWPCCPGCRCCPPLQRTDQECCSCWRFFFTDERNCSCCPCPYAEGRACQCCHC
SCSENPNCRWCCCSCSNDPDCKCCCCTSENTTCQYYESRCCRNTLYASYLPRARRRHHSK
VALPRFRSKSDTSIITLERDASGHAFRDQLTCPLCKQLYLYPFMLPCNHCICEKCIDKRK
AQAEVTENFFIIICPVCVKAHCLPYTNKIQLNMNYLRAKLARRYMRRHGFLRWRFDKTRA
SIYCQLCKEKTKKASKRCLTCRMNFCNECLRLYHSEVSHQDHIFTKAYQEEQGESCCLFH
PHSNLSGYCLDDHELICQFCKDTLHNDHETLPLPLACSKEAASLFSAIAKFKKVRYGVDN
DLMEMLLLKNNFKSYKETKRKEIRNGFLKLRNIIREQEKEMTEFLENIELKKEKGILEYV
THTSRKISQMDSLIQYSKEALKEENQIAFLQSANVLVNEIEDAIANIYQPSARLREDPIQ
NLKLNFEELSANMHDLFQTPVRMKQSADKANKAPYPCNSDIMVPRKISSTHTERHTSVFR
SPSLSTLNSQYESTMMKKEISRRSSSTPPPHYKERNEMFTFWDASTQISRKERNHQSTQS
PEPYHNGSALFPGLVIIYQTLVYPRTAKIYWTCPTEDVDFFDVEFYEVVSISPDNIVQTQ
LAGELHGIMNQNLELHNLEPNTEYLFKVRAVNVNGPGQWSEICKVVTPNVHEKARGRWGL
LRSIQSAFYKQL
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggtcagtatgttatgcctcagctggccatgttgcccaggctgccgttgctgcccccca
ctgcaaaggactgatcaagaatgctgttcatgctggcgttttttcttcactgatgagcgg
aattgtagctgttgcccctgcccatatgcagaaggcagagcttgccagtgttgtcactgc
tcgtgttcagagaatccaaattgtcgttggtgctgctgctcctgttcaaatgacccagac
tgcaaatgctgttgctgtacttcagagaacaccacctgccaatattatgaaagcagatgc
tgcaggaataccctctatgcatcataccttcccagagccagaagacgacaccattcaaaa
gttgccttaccaaggtttcgaagtaaaagtgacacatcaatcattacactggagagagat
gcatcaggacatgcttttcgtgaccagctcacttgtccattgtgtaaacaactatatctc
tacccatttatgctgccatgcaaccactgcatttgtgagaagtgtatagataaaagaaaa
gcccaggctgaagtaactgagaacttcttcatcatcatatgcccagtgtgtgtgaaagca
cactgcctcccttacactaataaaatacagctgaacatgaattatttgagagccaaacta
gctaggagatacatgcgcagacatggctttctgaggtggagatttgacaaaacccgagca
tcaatctattgtcaactttgcaaagagaagacaaagaaggcatccaagagatgtcttaca
tgtcgaatgaatttttgtaatgagtgtctaaggttatatcacagcgaggtcagccatcaa
gatcacatatttaccaaagcctaccaagaagaacaaggcgagagctgttgtttgttccat
ccccattcaaacctctctggctactgtctcgatgaccatgagctaatctgtcaattctgc
aaggacacactgcacaacgatcatgaaactctacccttgccgctggcttgttcaaaggag
gctgcttcactcttcagtgctattgccaagtttaaaaaagtccgatatggggttgataat
gacctaatggaaatgcttttgctaaaaaacaattttaagtcctacaaggaaactaaaagg
aaagaaatcagaaatggattcctcaaattacggaatattatccgtgaacaagagaaggag
atgacggaatttcttgagaacattgaacttaaaaaagagaagggaattctagagtacgtg
actcacacatccagaaaaatctctcaaatggacagccttattcagtattctaaggaggct
ttgaaagaggaaaaccagattgcatttcttcaatctgcaaacgttttggtaaatgaaata
gaagatgcaattgctaatatttatcagcccagtgctcgactcagagaagatcctattcag
aacctaaaactcaactttgaagaactttcagccaacatgcatgacctttttcaaacacct
gttagaatgaagcaatcagctgataaagcaaacaaagctccttatccctgtaattcagac
ataatggttcctaggaaaatttccagtacccacacagaaaggcatacaagtgtgttccga
agtccatctttatcaaccttaaattcacagtatgaatcaactatgatgaagaaagaaata
tctagaagatcaagttccacacctccccctcattataaagaacgtaatgaaatgtttaca
ttttgggatgcatctactcaaatttcaagaaaagaaagaaaccatcaaagcactcagagt
ccagagccataccacaatggatcagctctgtttccaggcctagttatcatctaccagaca
cttgtgtatccaagaacagccaaaatttactggacgtgtcccactgaagacgtggatttc
tttgacgtagagttctatgaagttgtttctattagtcctgataacattgtccagacacaa
ttagccggagaactgcatgggataatgaatcagaaccttgaattacataatctggagcca
aacacagagtatctctttaaagttcgggctgtcaatgtaaatggcccaggtcaatggagt
gaaatttgtaaggtggttactccgaatgtgcatgagaaagccagaggccgatggggcttg
ctgcgaagtatccaatctgctttttataaacaactataa

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