Pelodiscus sinensis (Chinese soft-shelled turtle): 102450502
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Entry
102450502 CDS
T02980
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102450502 (HTT)
04131 Membrane trafficking [BR:
pss04131
]
102450502 (HTT)
03029 Mitochondrial biogenesis [BR:
pss03029
]
102450502 (HTT)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102450502 (HTT)
Membrane trafficking [BR:
pss04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102450502 (HTT)
Mitochondrial biogenesis [BR:
pss03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102450502 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
HEAT_2
HEAT_ECM29
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
102450502
NCBI-ProteinID:
XP_006128323
Ensembl:
ENSPSIG00000015056
LinkDB
All DBs
Position
Unknown
AA seq
3119 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRVKKELTTSKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAAVWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYTWLLNV
LLGLLVPVEDEHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPDQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPDLLHALTTSGGITQVSVSKDESISR
SRSGSILELIARGGSSCSPVLSRKQKGKVLLGEEEGLEDDPETRSEVNTATFAASMKSEI
NSELASSSGVSTAGSIVSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLASTATEGEE
DDMLSRSSSQISTVQSDPIMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLEGT
ESLYSGMQIGQLQDEEDESANVLHDESSDPFKNSSLALQQPHLLKNMGHSRQPSDSSVDR
FMAKEEAVESGDHENKPSRIKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKAPLETMGEEYEEQYVSDVLNYIDHGDPQIR
GATAILCGTIVYSILNKSRFDVENWLANVRSSTGNLFSPVDCIPLLQKTLKDESSVTCKL
ACAAVRHCIMSLCSSSYSELGLQLIIDLLTLKNSSYWLVRTELLETLAEIDFRLVRFLEG
KADNLHRGVHHYTGLLKLQDRVLNSVVIYLLGDEDPRVRHIAAAALMRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRIYRGYNMVQSPADVTMENNISRV
ISAVSHALTTSTTRALTFGCCEALCLLSTTFPVCTWTVGWHCGYVSSSSIQASRIHIYKN
RGHSFSVSQLNPSEESQKSCTIGMAGMVLSLLSTAWFPLDLSAHQDALILIGNLLAASAP
KSLKNPWTTEDDVNPGAAKQEEPWPALADRTLVTLVEQLFSHLLKTINICAHVVDDVAPG
SAIKAALPSLSNPPSLSPIRRKGKEREPVEQTSVPMSPKKGSEINPAARQTDTSGPAPTS
KSSLLGSFYHLPSYLKLYDVLKATHANYKVTLDLQNNNEKFGGFLRSALDVLSQILELAT
LQDIGKCVEEILGYLKSCFNREPMMATVCVQQMLKTLFGTNLASQYDGLSSNPSKSQGKV
QRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLK
TSLTSATKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNY
CLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQ
LCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYH
QVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLSKQQMHIDSHEALGVLNTLFEILA
PSSLRPVDMLLRSMFVIPSTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSLS
PYLMSCQTINRLRDGENNVPVPEEQIELKQAKYLPEETFSRFLLQLVGILLEDITTKQLK
VDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTGDGSDGSFYTLESLSGL
VQFMIPTHPSLVLLWCQILLLVNYTNYSWWSEVHQTPKRHSLSSTKLLSPQISGNSDEFD
SESKFGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFIS
AVHRNSAASGLFIQAIQSRCENLATPTTLKKTLQCLEGIHLSQSGAVLILYVDKLLCTPF
RVLARMVDTLACRRVEMLLAATLQNSVSQLPVEELDRIQEYLQNRGLAPRHQRLYSLLDR
FRLTVAPETTSPSPLVTTHPLDGENQSALENIIPDKDWYVSLVRSQCWVRSDSALLEGTE
LVNRIPQPELNSFMTNKEFNLSLLAPCLSLGMNEISEDQKSNLFETARRVTLDHVSTFVQ
ELPAIHQVFQPLQPTETSAYWSKLSDIFGDRMMYQTSMRLCRALAQYLSFLSKLPESLCI
PPDKESDILKFVVMSLEALSWHLIHEQIPLSIDLQAVLECCCLTLQHPGLWNLLASAVYV
TQACSLINCVRFIIEAVAIEPGNQLLCPERKKNTSKGVSEDEVDSNSQKMKCITAACEMV
AEMVECLQTVLALGHKRNNSIPAFLTSLLKNIIISLGRLPLVNSYTRVPPLVWKLGWSPK
PAGDFGAAFPEIPVEFLQEKEIFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPIVMD
QEENQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNPAVSCLEQQPRNKALKVLDTRF
GRKLSVIRGIVEQEIQAMISKRDNIATHHFYQAWDPVPSLSPATTGGLISHEKLLLQINT
EREMGNMGYKLGQVSIHSVWLGNNITPLREEEWDEDEEDESDMPAPSSPPTSPINSRKHR
AGVDIHSCSQFLLELYSQWILPSNPSKRTPVVLISEVVRSLLAVSDLFTERNQFEMMYTT
LTELRKVHPSEDEILIQYLVPAICKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGAL
HGILYVLECDLLDETAKQLIPIICEYLLSNLRGIAHCLNVHNQQHILVMCAAAFYLIENY
PLDVGPEFSAGIMQMCGVMVSGSDESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLS
VDRVNTHSPHRAMAALGLMLTCMYTGKEKISPSRATDTNPTAPDSESVIVAMERVSVLFD
RIRKGFPFEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTL
HTTGQSSMVRDWVMLSLSNFTQRTPIAMAMWSLSCFFVSASTTQWVSAILPHIISRMGKS
EQVDINLFCLVAIDFYRHQIDEELDRRAFQSVFEMVASPGSPYHRLLTCLKNVHKITAC
NT seq
9360 nt
NT seq
+upstream
nt +downstream
nt
atggccactatggagaagctgatgaaggccttcgagtccctccgctcctttcagcagcag
cagggtccggctgccattcccgaggagccgctccagagagtaaagaaagaacttacaact
tccaagaaagatcgagtgaatcactgcctgacaatatgtgaaaacatagttgctcagtcg
ctaaggaattctccagaatttcagaaactgcttggtattgctatggaactctttcttctc
tgcagtgatgatgcagagtctgatgtcaggatggttgctgatgaatgtctcaataaagtt
ataaaagccttgatggattccaaccttcctaggttacagttagaactctataaagagatt
aaaaagaatggtgcttctcgaagcctccgagctgcagtttggaggtttgctgaacttgct
catctggttcgacctcagaaatgcaggccatacttagtgaacttactgccctgtttaaca
cggataagtaaacgacctgaagaatcagtacaagagacgctggctgcagcaataccaaaa
atcatggcagcatttggcaactttgcaaatgacaacgaaatcaaggttttattgaaggct
tttattgctaatcttaaatccagttctcctactatccgtcgaacagcagctggatcagca
gtaagcatctgtcaacactcacgaagaacacaatatttttatacctggctactgaatgtg
cttttaggtctgttagtacctgtggaagatgaacatcctactcttttaattcttggagta
ctgctcacactaaggtatctaataccattactgcagcagcaagtgaaggataccagtctg
aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttctccagatcagctt
atacaggtctatgagctgactttgcattacactcagcatcaggaccataacgttgtgact
ggagctttagaactattacagcaactttttagaacgccaccacctgatcttcttcatgcc
ctgaccacttcagggggcattacacaggtcagtgtatccaaagatgagtctatcagcaga
agccgcagtggaagcatattagagcttatagctagaggggggtcttcatgcagccctgtt
ctgtcaagaaaacaaaaaggcaaagtacttttaggagaagaagaaggcttggaggatgac
cctgaaacacgttcggaagtcaacactgcaacttttgcagcctctatgaagagtgagata
aacagtgaattagcttcttcatcaggagtatcaacagctggatcaatagtaagttctgca
gcggatcctacaggacatgacatcatcactgagcagccacgttcacaacatactttgcaa
tcagactctgtagacctgaccagttgtgatttggccagcacagctactgaaggagaagaa
gatgacatgcttagtcggagctccagccaaatcagcactgtccagtcagaccccattatg
gacttgaatgatggcacgcaggcatcttcacctgttagtgatagctctcagactaccaca
gaaggtccagattcagctgtgaccccttcggacagttctgaaattgttctcgaaggtact
gaaagcctgtattctggaatgcagattggacagctgcaagatgaggaagatgaatctgca
aatgttctccatgatgaatcctcagatcctttcaaaaattcttcccttgctcttcagcaa
ccccacttactgaaaaacatgggccatagcaggcagccttctgacagcagtgtagataga
ttcatggcaaaagaagaagcagtagaatctggagatcatgaaaataagccttccagaata
aaaggagatataggtcactacacagatggaaattctgctcctctggttcactgtgttcgt
ctcctatctgcttcttttctgcttactggggagaaaggtgctttagttcctgatcgggat
gtgagggtcagtgtaaaagcattggcagtaagttgtgttggagcagctgttgcccttcat
cctgaatctttcttcagcaaactgtataaggcacctcttgaaaccatgggagaagagtat
gaagagcagtatgtatcagatgttttgaactatattgatcatggagatccccagattaga
ggagcaactgccattctctgtgggaccattgtctactccattctcaataaatcacgtttt
gatgtggaaaactggctagcaaacgtcagaagttcaacaggaaatctcttttctccagta
gactgtatacctctcttacagaaaactctgaaagatgaatcctcagttacatgcaaacta
gcttgtgcagcagtgaggcattgtatcatgagcttatgcagtagcagttacagtgaacta
ggtttacagttaatcattgacctccttactctgaagaatagttcttattggcttgtaagg
acagagcttctggaaactcttgctgagatagatttccggttagtcaggtttttggaagga
aaagcagacaacttacacagaggagttcatcattatactgggctgttaaaacttcaggac
agagtgcttaacagtgttgtaatctaccttcttggtgatgaagaccccagagtgagacat
atagctgcagctgctttgatgaggcttgttcccaagttgttttataattgtgaccaagga
caggctgatccagtagtggcagttgcaagagaccaaagcagtgtctacttgaaactccta
atgcatgaaactcagcctccatctcactttgcagtgagcactatcaccagaatctacaga
ggttacaacatggtgcaaagtccagcggatgtcactatggaaaacaacatttctagggtt
atctcagcagtttcccatgcattaacaacatcaactacaagagcacttacttttggctgc
tgtgaagctttgtgtcttctctctacaacatttcccgtgtgcacatggactgtaggatgg
cactgtgggtatgtttcttcatccagtatacaagcttctagaattcatatttacaaaaac
agaggacactcattcagtgtttcccagctgaatccttcagaagaatctcagaagagctgt
actattggaatggctggtatggttttatcccttctttcaactgcctggttcccactggat
ctttctgcacaccaagatgctttaattttgattggaaacttgcttgcagcaagtgcgccc
aaatccttgaaaaacccctggactactgaagatgatgtgaatccaggtgctgctaaacag
gaggagccatggccagctttggctgaccgaactcttgttactttggtagaacaactcttc
tctcacttactgaagacaattaatatatgtgctcatgtagtggatgatgttgctcctggc
tcagcaataaaggcagcattaccttctctctcaaacccaccttctctaagtccaattcgt
cggaaaggaaaagaaagagaacctgtggaacaaacatctgtaccaatgagccctaaaaag
ggaagtgaaattaatccagctgctaggcaaactgatacttcaggtcctgctccaacaagc
aaatcatcattactgggcagtttctatcatcttccatcgtatctcaagttatatgatgtc
ttgaaagctacccatgcgaactataaggttacactggatcttcagaacaacaatgaaaaa
tttggaggtttcctgcgatcagctctggatgtcctctctcaaattttggaacttgcaact
cttcaagacattggaaagtgtgttgaagagatattgggatatctgaaatcctgttttaac
agagaaccaatgatggcaacagtttgtgtacaacagatgctgaaaactttattcggaaca
aacttggcttctcaatatgatggcttatcttcaaaccccagcaaatctcaaggcaaagtc
cagcgtttaggctcttctaatttgaggcctggtctttatcattactgcttcatggcccct
tatacacactttacacaggcacttgctgacgcgagtctaaggaacatggtacaggcagag
caggaacatgatgcttcaggatggtttgatgttctgcagaaagtttctacgcaactgaaa
actagccttacaagtgcaacaaaacatcgtgctgacaagaatgctattcacaatcacatt
cgcttgtttgaaccccttgttataaaagctttaaagcaatatacaacaacaacatcggta
caactacagagacaggttttagatctactagcacagttggttcagctacgtgttaactac
tgtcttctagattctgaccaggtgtttattggatttgtgctaaagcagtttgaatacatt
gaagtgggacagttcagggaatccgaggcaattatccccaatatttttttcttcctggta
ttattgtcttatgaacgatatcactccaaacagatcattggaattcctaagattattcag
ctgtgtgatggcatcatggccagtggaaggaaagctgttacacatgctataccagctctg
cagcccattgtccatgatctctttgtattacgaggaacgaataaagctgatgctggaaaa
gaactggaaacacaaaaagaagtggtggtatcaatgctattaagacttatccagtatcac
caggtgctggagatgttcatcctagtactgcaacagtgtcacaaagagaatgaagacaaa
tggaaaagattgtcccggcagattgcagatgtaattctcccaatgctatcaaaacaacag
atgcatatcgattcccacgaagctctgggagtattgaacactttatttgaaattttagct
ccttcttcactccgtcctgtggatatgcttttaaggagtatgtttgttattcccagtaca
atggcatcagtgagcactgttcagttatggatatctgggatcctagctatccttagagtt
ctgatttcacagtcaacagaggatatagttttatctcgtattcaggagctttctctctcc
ccttacttaatgtcatgtcaaacaattaacaggctaagagatggagagaataatgtacct
gtacctgaagaacaaattgagttgaaacaagctaaatatctgcctgaagagacattttct
aggttcttattgcaattagtgggcattctactagaagacattactactaaacagttgaaa
gtggacatgaatgaacagcagcacactttctattgccaagagttgggcacactgcttatg
tgtttaatacatatcttcaaatcagggatgttcagaagaatcacagctgctgccagcagg
ctttttacaggagatggatctgatggtagtttttatacccttgagagtctgagtggtctc
gttcagttcatgattcccacacacccttctttagtgcttctctggtgtcaaatcctactt
cttgtcaattacactaactacagctggtggtcagaggtgcatcaaacaccaaagaggcat
agtctttccagtactaaattgctgagtcctcagatatctgggaacagtgatgaatttgat
tcagaatccaaatttggcatgtgcaatcgagagatagtacgaagaggagcactcattctt
ttttgtgactatgtttgtcaaaatctacatgattcagaacacttgacatggcttatagtg
aatcatgttcaagatctaattaatctgtctcatgagcctccagtacaagactttattagt
gctgttcataggaattctgcagccagtggccttttcatccaggctatacaatctcggtgt
gagaaccttgcaactccaacaacactaaagaagaccctgcagtgcttagagggtattcat
ctcagccagtctggtgctgtgttaatattgtatgtggacaagcttttgtgtaccccattc
cgtgtgctggctcgtatggttgacacacttgcctgtcgtcgagtagaaatgcttttggct
gcaactctgcagaacagcgtttctcagttgccagttgaagaactggatagaattcaggaa
tatcttcaaaaccgtggattagcaccaagacaccaaagactttactcgctgttggacagg
tttcgccttacagtagcaccagaaacaactagcccttcgcctttggttactacacaccca
ctggatggggaaaaccaatcagccttagagaacataattccagacaaagattggtatgta
tcactagtcagatcacagtgctgggtcaggtctgactctgcactgcttgaaggtacagag
ctggtgaataggatacctcagcctgaattgaactccttcatgaccaataaggagtttaat
ttaagcttgttagctccctgtttaagccttggcatgaatgaaatctcagaagaccagaag
agcaacctctttgaaactgcccgtagagtaactctagatcacgtgtctacctttgtccaa
gaacttcctgccatccatcaggtttttcagccattgcagccaactgagacttcagcctat
tggagcaaactaagcgatatttttggagacaggatgatgtatcagacttcgatgagactc
tgtcgtgcactggctcagtatttatcgttcctctctaaattaccagaatctctctgtatt
ccacctgacaaagaaagtgacatcctcaaatttgtagtaatgtcattagaggcactgtca
tggcatttaatacatgaacagattccactaagtatagatcttcaagctgttttggaatgc
tgctgcctaacattacaacatcctggtctctggaatttgctggcttctgcggtgtatgtg
acacaggcttgttccctaattaattgtgtcagatttataatagaagcagttgcgattgaa
cctggaaaccagcttctttgtccagaaaggaaaaagaatacttcaaaaggggtcagtgag
gatgaagttgattcaaattctcaaaaaatgaaatgtattacagcagcttgtgaaatggtg
gctgagatggtggagtgcttacaaactgtcttggctctgggacataagaggaacaacagt
atcccagcatttctcacttctttgcttaagaacatcatcatcagcttgggtaggctgcct
ctagtaaacagctatacaagagtacctcctttggtctggaaactaggctggtcaccaaaa
cctgcaggtgattttggcgcagcatttccagaaatccctgtagaatttcttcaggaaaaa
gaaatttttaaagagttcatctatcgcattaatacactgggatggactagccgtacccaa
tttgaagagacctgggccactctgcttggagtgcttgtaactcaaccaattgtaatggac
caagaagaaaatcaacaagaggaagacacagagaggacccaaattaatgttcttgcagta
caagccataacctccttggtgctgagtgcaatgacaataccagttgcaggcaatccagct
gttagttgcttggaacagcagcctcgtaataaagctttaaaagttctggatacaaggttt
gggaggaagttaagtgttatcagaggaattgtggaacaagaaatccaagcaatgatatct
aagagagataatattgccactcaccatttttatcaagcgtgggaccctgttccttcactt
tctcctgctaccacaggtggtcttatcagccatgaaaaacttttactgcagatcaatact
gagcgagaaatgggaaacatgggctataaactaggacaggtttctatacactccgtgtgg
ctaggaaataacatcactccattgagagaagaggagtgggatgaagatgaagaagatgag
agtgatatgcctgctccttcttcaccaccaacctctcctattaactccaggaaacaccgg
gctggggttgatatacattcttgctctcagttcttgcttgagctgtacagtcagtggata
ttgccatcaaatcctagcaagagaacaccagtcgttctgattagtgaagtggtgcgatca
cttctggcagtgtctgacttgtttacagaaaggaatcaatttgaaatgatgtacacaaca
ttgacagaattgcggaaggtacatccatcagaagatgagattctcattcagtatttggta
ccagccatatgcaaagcagctgctgttcttggaatggataaagctgtagctgagccagta
agtcgtttgttggaatcaacactacgcagcacccatatgccaagtcggattggagctctg
catggaattctctatgtgctggaatgcgacttgcttgatgaaacagcaaagcaactcatt
ccaattatctgcgagtatttgctttccaatctgagagggatagcacactgtctaaatgtc
cataaccaacagcatattttagtgatgtgtgctgcagcattctacttgatagagaattac
ccactcgatgtagggcctgaattctctgcaggaattatgcagatgtgtggagtaatggtg
tctggaagtgatgaatcaactccatccattatctatcattgcgtcttgagaggattagaa
cgactccttctttcagagcaactttctaggctggatagtgaatctttagttaaactaagt
gttgacagagtgaacacacacagtccccacagagctatggcagccttgggattaatgctg
acctgcatgtatacaggaaaagagaaaatcagtccaagtcgagcaacagatacaaatccc
acagctccagatagcgagtctgttattgtggctatggaacgggtatctgttctttttgat
aggatccggaaaggatttccttttgaagctagagtagtggcacggatcctccctcagttc
ctagatgactttttccctccacaagatgtaatgaacaaagttattggagaatttctatct
aaccagcagccatacccacagttcatggccacagtagtttataaggtttttcagacacta
cataccactggacagtcatcaatggtccgtgattgggtgatgctatcgctctccaacttc
acacagagaacacctattgcgatggcaatgtggagtctttcctgtttttttgtcagtgct
tccaccactcagtgggtttcagcgattcttccacatattatcagcagaatgggaaaatcg
gagcaagtggacattaacctcttctgtttggtggcaatagacttttacaggcaccagata
gatgaggaactagaccgaagggcctttcagtctgtgtttgagatggtagcatcaccagga
agtccgtatcatcgcctactaacttgcttaaaaaatgttcacaagatcacagcatgttaa
DBGET
integrated database retrieval system
