Pelodiscus sinensis (Chinese soft-shelled turtle): 102450537
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Entry
102450537 CDS
T02980
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102450537 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
102450537 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102450537 (THOC2)
03041 Spliceosome [BR:
pss03041
]
102450537 (THOC2)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102450537 (THOC2)
Spliceosome [BR:
pss03041
]
Complex C
Other components
EJC/TREX
102450537 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102450537 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
102450537
NCBI-ProteinID:
XP_014425198
Ensembl:
ENSPSIG00000015352
LinkDB
All DBs
Position
13:32410162..32531239
Genome browser
AA seq
1611 aa
AA seq
DB search
MAAAGALPAEWIKNWEKSGKSEFLQLCRTLSENKSHENVTFRDIQQALYELANHVVKGNL
KHDQASNVLSDVIEFRDDMSSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEP
QTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQHS
QSIMDQMPPFYATSHKPIAIALCHLVHVTIEPLYRRVGVPKGAKGSPISNLQNKRAPKQA
ESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQSD
GNKQEDKERMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYGQ
WKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQ
IQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFC
GAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGG
EQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLV
GKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHI
SSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWS
LTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQL
EHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQ
KTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECGN
YPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIV
LTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEF
HHKDPPARNAVAATVQNGPGGGGLPASLTINAAKLEESTAEETDKLKEKSQGAVKVINKA
ASATPKVTTSNGNSASNSKIIKEKDEKEKSGKEKDKEKKEKTPAAIPEAKALGKDGKDKP
KEERANKDDKTRETKEKTPKSDKEKEKVKKEEKTSKDEKSKTVVTNAEIKSAAEKEREKE
PSRERDVAKDMKSKENIKGGEKLPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSS
TVKESLSELKDSSAKHYINHTTPALSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRK
RDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKG
DSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggcaag
agcgagtttttacaattatgccgtacactcagtgaaaataaaagccatgaaaatgtgact
ttcagagatatccagcaggctctgtatgagcttgcaaatcatgttgtcaagggaaacctc
aagcacgatcaagcttctaatgttctcagcgatgttatagaatttcgggatgacatgtcc
tccatccttgctgatgtcttctgcatattggatattgaaacaagttgtttagaagaaaaa
agcaagagagatcattttacgcaactggtgttagcctgtttgtaccttgtttcagacact
gtcctaaaggagcgtctggatccagaaacactggaatcattagggctcatcaagcagtct
cagcagttcaatcagaaatctgttaaaatcaagacaaaacttttttataaacaacagaaa
tttaacttattaagagaagagaatgaaggttatgcaaagctgattgctgaactggggcaa
gatttatctggcaatatcactagtgatttaatcctagaaaatatcaaatctttaatagga
tgttttaacttggatcccaacagagttttggatattatcttagaagtctatgaatgtagg
ccggaatatgatgaattctttgtacctttgatagaatcatatatgtatatgtgtgaacct
caaactctgtgtcatatccttgggttcaaattcaaattctatcaggaaccaaatggtgaa
acaccttcctctttgtacagagttgctgcagtacttttgcaacataatcttatagatttg
gaagatctctatgttcaccttcttccggtagataatgctattcttgaagaacacaaacga
gagattgtggaggcaaaacaaattgttagaaaacttacaatggtggttttgtcctctgaa
aagactgaagagaaagagaaggaaaaagacaaggaagaggaaaaaactgaaaagccaccg
gacaaccagaaacttggtttgttggaagctttgttaaaagttggtgattggcagcattca
cagagtattatggatcagatgcctccattttatgccacttcacacaagcctattgccatt
gccctttgccatcttgtacatgttaccattgagcctttgtaccgcagagttggagtacct
aaaggagctaaaggatcaccaatttccaatttgcaaaataagagagcaccaaaacaagca
gaaagttttgaagatttgaggaaggaagtgttcaacatgctgtgttatcttggtcctcat
ctctcccatgatcccattttatttgcaaaagtggttcgcttaggaaaagcatttatgaaa
gaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcagtctgat
ggaaacaaacaagaagataaagagagaatggagatcttgtttagctgtttgttaaatatt
accgaccaagttttgcttccatctcttactctaatggactgtaatgcgtgcatgtctgag
gaactctggggaatgttcaaaacttttccataccagtatcgctatcgtctctatggacaa
tggaagaacgaaacatacaacagtcatccacttctagtgaaagttaaagctcaaactata
gacagagccaagtatatcatgaagcgtctaaccaaggaaaatgtgaagccttctggaagg
caaattgggaaactgagccatagcaatccaacaattttatttgattatattttgtcacaa
atacagaagtatgacaatttaattacaccagttgttgattccttgaaatacctcacttct
ctaaactatgatgttttggcatactgcatcattgaagctctggcaaatcctgagaaggag
agaatgaaacatgatgacactacaatttctagctggttgcagagcctagctagtttttgt
ggtgctgttttccgaaaatatccgattgaacttgctggcctactgcagtatgtagcaaac
caactaaaggctgggaaaagctttgacttgctaattttaaaagaggtggtacaaaaaatg
gctggaatagaaattacagaagagatgacaatggagcagctagaagccatgactggtgga
gagcagctaaaagctgagggtggctattttggccagatcagaaacactaaaaaatcttca
caaagattaaaagatgcattacttgaccatgatctggcccttccactatgcctgcttatg
gctcaacagcgaaatggtgtgatctttcaggaaggaggggagaaacatttgaagctggta
gggaagctgtatgatcagtgccatgatactctagtacaatttggtgggtttttagcatct
aatctaagcacagaggattacattaagcgagtgccttccattgacgttctctgtaatgag
tttcacaccccccatgatgctgcatttttcctctccaggcctatgtatgcacatcatatt
tcatcaaaatatgatgaacttaaaaaagctgagaagggaaacaaacagcagcacaaagtt
cacaagtacatcacatcatgtgagctagtgatggctcctgttcatgacgctgtgatctcc
ttgcaccttcctaaagtttgggatgacattagtcctcagttctatgctacgttttggtct
ttgacaatgtatgacctcgctgttccacataatagctatgacagagaagtcaataaactt
aaagtccagatgaaagctattgatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgtacggctcttcaggacaagcttcttgaagaggagaagaagcagttg
gagcatgtgcagagggttctacagagactgaaactggaaaaggataactggcttctagca
aaatcaaccaaaaacgagactatcacaaaatttctacagttgtgtatatttcctcgctgc
attttttccgcaatcgatgctgtttactgtgctcactttgtagaattagtgcatcaacag
aaaacaccaaatttttcaacacttctctgttatgatagagttttctcagatataatctat
acagtagcaagttgtactgaaaatgaagctagtagatatggcaggtttctatgctgtatg
ctagagactgtgactagatggcacagtgatagaaacatatatgaaaaggaatgtggaaac
tatccaggcttccttaccatattacgggcaacgggatttgatggtgggaacaaagcggat
cagttagattatgagaactttagacatgtggtacataagtggcactataaattaactaag
gcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagttctgaacctgggtcaggccttggaaaga
agagtccataaaatatgccaggaagagaaagagaagagacctgatctatatgcattagcc
atgggctattctgggcaattgaaaagtagaaagccttacatggtaccagaaaatgaattc
catcacaaagaccccccagccaggaatgctgtagctgcaacagtgcaaaatgggccaggt
ggtggtgggctgcctgcatcactgacaataaatgcagctaaactggaagaaagcactgct
gaggagactgacaaactaaaggagaaatctcagggtgctgtgaaagttattaataaagct
gccagtgcaacaccaaaggtgacgacaagcaatggaaacagtgcttctaacagcaaaatt
attaaagaaaaagatgagaaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaa
aagactccagctgccattccagaggccaaggcacttgggaaggatggaaaagataaacca
aaggaagaacgggcaaacaaagatgataaaacaagagagacgaaggaaaaaacaccaaaa
tctgacaaagagaaagaaaaagtcaagaaagaagaaaaaacatcaaaagatgaaaaatcc
aagaccgttgttaccaacgctgagataaagtcagctgcagaaaaggagagagaaaaggag
ccatccagagaaagagatgtagcgaaggatatgaaatccaaggaaaatattaaaggagga
gaaaagttgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagag
tctgaaagggaacaaaaacgtcgaaaagttgatacccattcttctccatcacattcctca
acagtaaaggagagcctcagcgaactcaaggactcctcagcaaagcactacattaaccac
actactcctgcactgtccaagagtaaggagagagaagtggaaaagaaagatttggacaag
tccagggaaaggtccagagaaagagagaagaaagatgaaaaggatagaaaagatcgaaaa
agggatcattcaaatagtgatcgggaggtgccacaggattcaaccaaaaggcgtaaagag
gaaaatggaacaactggttcctcaaaacacagtaaaagtgaaagtccatctgattctcct
cgttcaaatgagaaggaaaaggagaagaacaaatcaaaatcttcaggcaaagaaaaaggt
gattcaatcaaaactgaaaagatggagaaaagttcttctggtagcaaaaaggagtctaga
catgataaagaaaaaacagaaaaaaaggaaaaacgggacagtactggagggaaagaagaa
aagaaacatcataaatcttcagacaaacacagataa
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