Pelodiscus sinensis (Chinese soft-shelled turtle): 102450718
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Entry
102450718 CDS
T02980
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pss03009
]
102450718 (LTN1)
04121 Ubiquitin system [BR:
pss04121
]
102450718 (LTN1)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102450718 (LTN1)
Ribosome biogenesis [BR:
pss03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102450718 (LTN1)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102450718 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
zf-ANAPC11
FANCL_C
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
PfkB
C1_1
Motif
Other DBs
NCBI-GeneID:
102450718
NCBI-ProteinID:
XP_014430535
Ensembl:
ENSPSIG00000017363
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MGGKNKQRTKGNVRPSSSGRAAELLAKERGTVPGFIGFGTSQSDLGYVPAVQGAEEIDSL
VDADFRMVLRKLSKRDVTTKLKAMQEFAAMCKERESEAVKGVLPYWPRIYCKISLDHDRR
VREATQQAFEQLILKVKKHLAPYLKSIMGYWLVAQCDTYSPAASAAKVAFETAFPSSKQP
EALAFCKEEVLNMLQDHLLKETPDTLSDPQTVPEEEREAKYFRILTCSLLALKKLLCMLP
KNETHSLEEKLIPLQSQNKFWKYGKHSVPQVRSAFFELVSTLCQLLPESMKVEAPRVCPA
VLLSIDDSDAVACPALWEALLYILVTIEDCWSHVNAKKGVLPKLWIVLREGGRGLATVIY
PNLLPLISKLPHGITAPKLDFYRTFFSSIIQGLSSERALASHSECSAIISAFMECLRFAM
LQHLGEEDEQKQIQNMLICDQLIPLIEAVLKESKLQTGPLFYQIAETLMSWETKTENLND
DGTAETFQRLLSDFWDRLSKMCVLCVDVADADETSLVAISCMLQILQSPESSMKPSKRRT
IKIRFTDENESERNTENGKLAAVTNNGESEILTDTPHTLLLRKEPLEDLVCTLAELSIVY
ISEQKSDRHLKFLSALLNSFSSSRVFQCLLEQEIGVSAVQIESQVDVKLHENPSVRFLHQ
KLIAWLKEDWRKETDFLVDILYSVISCCNSNTERKNILDDLSKMDLKWNIFLQIIQKACS
DSVKHSLVSGWLKGDVLGEKLVILADDLCYKGLKTTTTSSELYCSERWTLLSLVLSQHVK
NESLIGEIYVERIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASNFFSSVKGCLLMPSS
EDLLFTIFQLCAQSQDATHLSDSLFSKLKHTWLSGLNSLVHQVGYMQTQCTFLRKSALWV
KNQIQSSSLEVKSLQVLISAVNDLLTKLLEADQLSACLLGAYFGHIIPNNSEWEKLRKAL
PIEWLHKPLLEGRLSVNCEHSATEVKLCKATKLPNHLCTAALLSKMALLIKEYEVVFENH
DAERKNIENIIAELLYSLQWIEELNDPPCVFLEFLNMLQVLSITYEDLSTFGNTANLLQI
LFNRSKECGRLWALAMVRLIHTKNIAFSEIKQLYKMTEGFFPLTEGNLHTVQSLSPFLPE
EEKEELVIQCTAKLMSCTQTELFSTDGAFGYLSILNSCLQSGSIDCRELLPGILKIIMSW
RNDSEHSFLFSCNLKEATPQLLGFNIEMIRYFPLLLKYSTSPLVDNEWDFVLCAMLAWLE
TTSENPSLYHVPLVQIFACVSCDLASALSAYFQMATPETIKNLPSNLISEWKEFFSEGIH
NLLLTLLVKVTEGSKDASEKSFQNSVLKSLGEVLTYISKDQLLNHKLPAKFVAGQKTNLP
DNLQTLLNTLSPLLLFRARPVQITVYHMLYKLMPELPKFDDEDLKSYGDEEEESALSPPA
ALMSVLATQELFLENILECIPVGEFAVVQPLSEEFCFILGYLLTWKLILTFFKAASSQLR
ALYSQYLRRTKNLNKLLYHLFRLMPENPAFSVPATEVPDKDTKTFFTEELCLSVKDTTVL
SSQIPHLACSVYHMTLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSNVLSLQEISSVQT
STQLFNGMTVKARSATREVIATYSVDDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQW
RNWMLQLSTYLTHQNGSIMEGLSLWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRT
CKKKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaagaacaagcagcgaaccaagggcaacgtgcggccctccagcagtggcaga
gctgcagaactccttgccaaggaacggggaacagtgcctggttttattggctttggaaca
tctcagagtgatctaggatatgtacctgcagtccaaggagcagaagaaatagacagcctt
gtagatgctgatttccgaatggtgctgcgaaaactctccaaaagagatgtcacaacaaaa
ttaaaagctatgcaggaatttgctgcaatgtgtaaggaaagagaatcggaagctgttaaa
ggtgttcttccttactggccgagaatttactgtaaaatctcacttgatcatgaccgccgt
gttcgagaagcaacgcaacaagcttttgagcaacttattcttaaagtaaagaagcacttg
gccccttatttaaaaagtattatgggatactggctggttgctcagtgtgatacttactcc
cctgcagcatcggcagctaaagtggcatttgagacagctttcccttcaagtaaacaacct
gaagccttagcattttgtaaagaagaagttctgaatatgctacaagatcaccttctcaaa
gaaacccctgatacactcagtgatccacaaactgtaccagaagaagaacgggaagccaaa
tactttcgaattctgacatgctccttgttagccttaaagaagttgctttgcatgttgcca
aagaatgagactcattcactagaagaaaagctaataccccttcaatctcaaaacaaattt
tggaaatatgggaagcacagcgtacctcaggttcgctccgctttttttgaattagtttct
actctctgtcagctccttcctgagtcaatgaaagttgaagctccaagagtttgtcctgca
gttcttctaagtatcgatgacagtgatgcagtggcgtgtccagctctttgggaagccttg
ctgtacattcttgttaccattgaggattgttggagtcatgtaaatgccaaaaaaggagtt
ctgccaaagctatggatagtacttcgagaaggtggacgaggtctagctactgttatatat
cctaatctcttgccattgattagcaagttacctcatggcattacggcaccaaagctggac
ttttacagaacatttttcagctccataattcaaggcttgtctagtgagcgagccttagct
agccattcagagtgttctgcaatcatatctgcatttatggaatgtttacgatttgcgatg
ctacagcatttgggagaagaagatgaacaaaaacaaattcagaatatgcttatttgtgat
cagttaattcctctcattgaagctgtacttaaagagagcaagttacaaacaggtccactg
ttttaccaaatagcagaaacactgatgtcctgggaaacaaaaacagaaaacttaaatgat
gatggcacagctgaaactttccagaggctgctgtcggatttctgggacaggctctctaaa
atgtgtgtactctgtgttgatgtagcagatgctgatgagacgtctttggttgctatatcc
tgtatgctacaaattctgcagagcccagagagctctatgaaaccaagcaaaagaagaacc
ataaagatcagatttacagatgagaatgaatctgaaagaaacactgagaatgggaagctt
gctgcagtgacaaataatggtgaatctgaaatactgactgatacgccacacaccttgtta
ttaaggaaagaacctttagaagatttagtctgtaccctcgctgaactgagtattgtgtat
atcagtgaacagaagtctgatcgtcacttaaagtttctgtctgctctgctcaactccttc
tcttctagcagagtttttcaatgtctgttagagcaggaaataggtgtgagtgctgttcag
attgaatcccaagtagatgtaaaacttcatgaaaatccttcagtacgctttttgcatcag
aagttaatagcttggttgaaagaagactggaggaaagagacagattttctggttgatatt
ttgtacagtgtcattagttgttgtaacagtaatacagagagaaaaaatattcttgatgat
ttaagtaagatggatctgaaatggaatattttcctacaaataattcaaaaggcatgctcg
gactcagtgaaacattctttagtttctgggtggctgaaaggtgatgtgctaggggagaaa
cttgtaatactagcagatgatctgtgctataagggtttgaaaaccacaacaacctcgtca
gaattgtattgttcggaaaggtggaccctcctgagcttggtgttatcacagcatgttaaa
aatgagtctttgattggtgaaatttacgttgaaagaattattgataaacttcaagcagct
ctttcaaaagctaaggatctttctgaagctggaaatactgaaccatcagtatcgttcata
tgtgatgtagcctctaactttttcagctcggttaaagggtgcttactgatgccatcttct
gaagatttgttgttcactattttccaactttgtgctcagagccaggatgctacgcactta
tcagattcacttttcagtaaactaaagcatacttggttgtctggcctaaattcccttgta
catcaggttggctatatgcagacacagtgcaccttcctgcgtaaatctgcattgtgggtc
aagaatcaaattcagtcttcatctttggaggttaaaagccttcaggttttgatctctgca
gttaatgatttgctgaccaagctactggaagctgatcaactgtctgcttgtcttcttggt
gcttattttggacatattattccaaataactctgaatgggaaaagttgcgaaaagctcta
cccattgagtggttacacaaacctcttttggaaggaagactgagtgtgaactgtgagcac
tcagcaacagaggttaaactatgtaaagcaactaaacttccaaaccatctgtgcactgct
gcattgttaagtaaaatggcactacttataaaggaatatgaggtggtatttgaaaaccat
gatgcagaaagaaagaatattgagaatataattgcagaactgttgtactcattgcagtgg
attgaagaacttaatgatcctccttgtgtcttccttgaatttctcaacatgcttcaagta
ctcagtattacatatgaggatttaagtacatttggtaatacagccaaccttctgcaaata
ttatttaacaggtcaaaggagtgtggaagactttgggccttagccatggttagattgatc
catacaaagaatattgcattcagtgaaataaagcaactttataaaatgacagaggggttt
tttccattaacagaaggcaacttacatacagttcagagtctgtctccatttttacctgaa
gaagaaaaggaagaactagttatccagtgtactgctaaacttatgtcatgcacacaaaca
gagctcttcagtactgatggagcttttggatatctttccattttaaactcctgcttacag
agtggaagtattgattgtcgggagctactgcctggaatattaaaaatcatcatgtcatgg
agaaatgatagtgagcacagcttccttttcagctgcaatctgaaagaagcaacgccacag
ttgcttggtttcaatatagagatgatccgttactttcctctgttgctaaaatattccaca
tctccactggtggacaatgagtgggacttcgtattgtgtgctatgctggcctggctagag
acaacaagtgaaaacccttcgctttatcatgttccacttgtgcaaatttttgcctgtgtc
agctgtgacttagcctctgcccttagtgcttacttccagatggcaactcctgagacaatc
aaaaatcttccttcgaatttgatcagtgaatggaaggaattcttttctgaaggcattcac
aacttgctgttaactttattggtaaaagtcacagagggaagcaaagatgcatctgaaaaa
tcctttcagaactctgtattgaaatccttaggtgaagtcctaacatacatttcaaaggac
cagttgttgaaccacaaactaccagccaaatttgttgctggccagaaaacaaatctccca
gataacctacagaccttgttaaacacgttatctccgttgctgcttttccgagctagacct
gtacaaatcactgtctaccacatgctttataagttaatgcctgaattgcctaaatttgat
gatgaggatctcaagtcttatggtgatgaagaagaggaatcagctttgtcaccacctgca
gctcttatgtctgttcttgccactcaagaactctttctagaaaacatcctagaatgcatt
ccagttggagagtttgcagttgttcagccactgagtgaagagttctgctttattttagga
tatcttctcacatggaaattaatattaacttttttcaaggcagcttcttctcaactacgt
gctttgtattcacaataccttcgaagaacaaagaatctgaataaactgctttatcacctg
ttcaggcttatgccagaaaaccctgccttttcagtgccagctactgaagtcccagataag
gacacaaaaactttctttactgaagagctttgtttaagtgtcaaggatacaacagtactg
tcatctcaaattccgcacttagcttgctcggtgtatcatatgacattgaaggacttgcca
gccatggttaggctttggtggaatagctgtgagaaacgtgtcttcaatgttgtagataaa
tttacaagcaaatacgtcagcaatgtactttctttacaagaaatatcttctgtgcagact
agcacacagttatttaatggcatgacggtaaaagctcggtctgctactcgggaggtgatt
gctacctattcagtggatgatatatttattgaactgataatacagcttccatcaaattac
ccactgggatcaataacagttgagagtggaaagagggttggtgtggctgttcagcagtgg
cgtaactggatgctacagttaagcacgtacctcactcatcagaatggaagtattatggaa
ggcttgtctttgtggaaaaataatgtggacaaacgatttgagggcattgaagattgcatg
atctgtttttcagtcattcatggttccaattattctcttcccaaaaaagcctgtagaaca
tgcaagaaaaaattccattcagcctgtttgtacaaatggttcacatctagcaacaaatcc
acctgtccactttgtcgagagacctttttttga
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integrated database retrieval system
