Pelodiscus sinensis (Chinese soft-shelled turtle): 102450779
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Entry
102450779 CDS
T02980
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102450779 (TDRD12)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102450779 (TDRD12)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102450779 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102450779
NCBI-ProteinID:
XP_014428035
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MKMIEVLILKIEDPGCFWVIIKGCRPFVDREMEYKKLHAEMNQFYNTDVEEVKPLTLEEG
QVCVVFCQELRCWCRAVVKSILFCADHYLAECFLVDYAKYIPVKTKNIRVAVEAFMKLPY
RAKKFRLYCTKPVTLRVDFCEDSAKIVPAKRWDSAAIQYFQNLLKGTTQIEAKLCAIEDD
NFDVYLYVTIKDEKVCVNDDLVAKNFACYVMTKENTANSGKNQKRWSLLSLKSSPETVIN
PALALWPVLMQGKIHNLGTGDAVPNSFLEKTWKKNATSDLNGKIQSAAVGFSFKENITIS
VQPTVQVNRLLQFLNPDPLKIDDIPSEQQEFQKINTEQPPIVLSNKIEPCSTLEAAPLLV
DLKKELLWNKFLCPNLTESYCWPPIARGCDSVVICHHGNDPLLYIPPFLTFLQSGNCYKS
LPARNGPVALIVCPGWRKAQLVFELLVKYGRCSRPLHPMLILVGLNKEEAKNVKLQRGCE
VIVTTPHSLLRLLEHHSLILLRVCHLVFDEVDNLFSEASRQMCTILESYKKTITVEDREL
APHQIVAVGCHWNKHIEHLTNEFMNDPYIVITAMEEASIYGNVQQVVQLCLNCERTSVLL
QILDFAPSIAQKTLIFTDSVDETEIVYRAVESSSIFCLKVHKEIEFNFKHAIEQWNRKIS
SGTHVVLVLTDDCMPSLGITDATCVVHFSFPASRRVFGVRLHSMFDNFQNVLEKGSSVDQ
IYIKAKSILLVTERNGCHAVGVLRYLEHTEAEIPSELRNFTAGILDAKEDMKLEEPLCQC
LKRSGVCKDMRICPNRHRVHLQIDLLQKISVSALPKTGHVTILPLHIVDATNYFGRIIDK
KKDQYAILAEEMTEYFKKAGNKLSVEMVEKQALYGLHEEGIFHRVQVLDIPPKEENCLFH
NVVIKYIDEGRIGQVQGHELFHLPARFQVLPSQAVEFIVSRVKPIDNEIEWNPKITRYIH
HKIRGKLHEAKIVLALGNTVWVDPMVRVTKLSDLKTSINEYNIRSEILSMGMGIDNPQHI
KQLQKLCEHAKMLALEETTLHTFTADILGSFGMWLLFSFRSPVSEQHQTALGVINPRGLT
GSQGHLVIAVAVTPVFTGLCHKESPTWDHSSLHRGGIGGIDFYLSDPEEVPLCRPPPLLP
PDEAIVEPLDNAQAHQEFFNRMTTNLNLYD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattgaagtattgatattgaagattgaagatccaggttgcttttgggtcatt
ataaaaggatgcaggccttttgtagaccgtgaaatggaatataagaaacttcatgctgaa
atgaatcagttctataacacagatgtggaggaagtaaagccattaacattagaagaaggg
caggtttgtgtggttttctgtcaagaactgagatgctggtgtagagctgttgttaagtcg
atcctgttctgtgctgatcattatctagcagagtgtttccttgtagattatgccaagtat
attcctgttaaaacaaaaaacattcgagttgcagtggaagcatttatgaaactcccatat
agagcgaaaaagtttagactctattgcacaaagccagtcacgttgcgtgtagatttctgt
gaagactctgcaaaaatagtacctgcaaagagatgggacagtgcagctattcagtacttc
caaaaccttctaaaaggaaccacccagatcgaggcaaagttatgtgcgatagaagatgac
aattttgatgtttatctttatgtaacaataaaagatgagaaggtatgtgttaatgatgat
cttgttgcaaagaactttgcttgttatgtgatgactaaagaaaacacagctaattctgga
aaaaaccaaaaacgatggtctttattaagtctgaagtcttctccagagactgtgatcaat
cctgcacttgctctttggcctgtgttaatgcaggggaaaatacacaatcttggaacaggt
gatgctgttcctaattcttttcttgaaaagacatggaaaaaaaatgctacatctgatctt
aatgggaaaattcagtctgcagctgtgggtttttcttttaaagaaaatataactatttct
gtgcagcccactgtacaagtaaacaggctcctgcagtttctgaatcctgatcctttgaaa
attgatgatattccttctgagcagcaggagtttcaaaagatcaatacagaacaacctccc
attgttctcagcaacaaaatagaaccgtgttcaactcttgaagcagcaccacttttggta
gatctgaaaaaggagctactctggaataaatttctatgtcctaatctcacggaatcttac
tgttggccaccaatagctcgtggatgtgattcagttgtcatttgtcatcatggaaatgat
cctcttttgtatattccaccatttcttacatttttacagtcagggaactgctacaagtcg
ctgccagctaggaatggaccagttgcattaattgtatgtcctgggtggaggaaagcacaa
cttgtttttgaattattggtaaagtatggcagatgctccagaccacttcatccaatgtta
atattagtaggactgaataaagaagaagccaaaaatgtgaaacttcaacgaggatgtgaa
gtgattgtaactacaccacacagccttttgagactgcttgaacaccatagcttaatatta
cttagagtttgtcaccttgtttttgatgaggttgataacttgttttctgaagctagcaga
caaatgtgtactatattagagtcttacaagaaaacaattactgttgaagatcgggaattg
gcaccacatcagattgttgctgttggatgtcattggaataaacatatagaacatttaaca
aatgagttcatgaatgatccttacattgtgataacagctatggaagaagcttccatatat
ggaaatgtgcaacaggtggtacaactttgcttgaactgcgagagaacctctgtattactc
cagatattggattttgctcccagtatagctcaaaagaccctgattttcacagattccgtg
gatgaaacagaaattgtctatagggcagtagagagcagttctatattctgcttgaaagta
cacaaagaaattgaatttaatttcaaacatgccattgagcagtggaacagaaaaattagt
tctggcacccatgttgtattagttttaactgatgactgcatgccatccttgggaattact
gatgcaacttgtgtggttcattttagttttcctgcatctcgaagagtttttggtgtgcgc
ttacacagcatgtttgataacttccagaatgtattagaaaagggttcctctgtagatcaa
atatatataaaggcaaaatcaatcttattggtgacagaaagaaatggatgccatgcagta
ggtgtactgcgttatttggaacacacggaagctgaaattccatcagaactgcgtaacttc
acagcagggatacttgatgcaaaagaagatatgaaacttgaagagcctctttgtcaatgt
cttaaaagatctggtgtttgcaaggatatgagaatatgtccaaatcgtcatcgagttcac
ttacaaatagacttactccaaaagatttcagttagcgctttaccaaagactggacatgtc
acaatactacctctccatattgtggatgcaacaaactactttggtcgcataatagataaa
aaaaaggatcaatatgcaattcttgctgaagagatgactgagtattttaagaaagctggg
aataaattgtcagttgaaatggtggagaaacaagcgctatatgggttacatgaagaaggt
atttttcacagggttcaagtgttggatatacccccaaaagaagaaaattgtttatttcat
aacgttgtcatcaagtatatagatgaaggcagaattggtcaagtgcaaggtcatgagctt
tttcacttacctgcaagatttcaggttttgccctcacaagctgtagaatttattgttagt
agagtgaaacctattgataatgaaattgaatggaacccaaagattactagatacattcat
cacaaaattcgaggaaaacttcatgaagcaaaaatagtgcttgccttaggaaatacagtt
tgggttgatccaatggtccgggtcaccaagctttcagatttgaagacttctatcaatgaa
tacaatattcggtctgagattttatctatgggaatgggaattgacaatccgcagcatata
aaacaactccaaaagttgtgtgaacatgcaaaaatgctagctcttgaagagacgaccctg
catacttttacagcagatatcttgggctcctttggaatgtggctcctcttctcgtttcgt
agcccagtctcagagcagcatcaaacagctctgggtgtcatcaaccccagaggccttaca
ggcagccaaggacatcttgtcattgctgttgctgtcactcctgtgttcacaggactgtgc
cataaagaaagcccaacatgggaccactccagtctccacagaggtggaataggaggcata
gacttctacctctctgatcctgaagaagttcccctgtgcaggccacctccgcttcttccc
ccagatgaagccattgtggagcccctggacaatgctcaggcccaccaggaattttttaat
aggatgaccaccaacctaaacctgtacgattga
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