Pelodiscus sinensis (Chinese soft-shelled turtle): 102450873
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Entry
102450873 CDS
T02980
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102450873 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102450873 (HBS1L)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102450873 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102450873
NCBI-ProteinID:
XP_025040845
Ensembl:
ENSPSIG00000016467
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MLSWKLAASPAGSAPFPPTADKLVSPQPGGWALRAARDVTTTRPIHPGGLLLLGRQEKRG
FVGPQPVSSIEYFKRRCGQFQDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSALAE
PLEEEYGYEGAEESANCFTSNHQLTGVDQAHLYSCLDQMREVLGEAVPERVMVEAVLNSK
FDIQKALDLVLSQDSKQSMKTKNEEAVIMGKTTKGKPRDSQSTKIDSEILPKVTKMTVSG
KKQSMGFEVPSMIVEENGHNSNTPPKRPLSEESNVTSGVIEMVSKPALSSQTIQISEEQT
SVPTPVKKPSKTKQQINVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNK
RTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHK
DFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD
QVSWHQERFLEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVSVCQSSELTEWYKGKC
LLEQIDSFKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETC
TAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCGLKEPIKACTRFRARVLIFN
IEVPVTKGFPVSLQLVVSLNILIFFIGGSVFLLI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttggaaactggctgcgtccccagcgggcagcgctcccttcccacctactgcg
gacaagcttgtttccccccagcccggcggctgggcgctgcgtgccgcgcgtgacgtcaca
accacccgacccatccatccaggcggcctgttgctcttgggcaggcaggaaaagagggga
tttgtagggccgcagcctgtatccagtatcgaatacttcaaaagaagatgtgggcaattc
caagattttgaagatgatgatctttatggccaatcggtagaggatgattgttgtatttcc
ccgtcaacagctgctcagtttatttactcaagacgtgataaaccctcagcacttgctgag
ccattagaagaagagtatggctatgaaggtgcagaagaatctgccaactgttttacatcc
aatcaccagctaactggagtcgatcaagctcatctttattcgtgtcttgaccagatgaga
gaagtgctgggggaagctgtaccagagcgggtgatggtggaagcagtgttgaatagtaaa
tttgatatacagaaggctttggatcttgtgctttcacaagacagtaagcaaagtatgaag
accaagaatgaagaagctgtgattatgggaaagacaacaaaaggaaaaccaagagattcc
cagtcaaccaaaattgattctgaaattctgccgaaagttaccaaaatgacagtgtctgga
aagaaacaatctatgggatttgaagttccaagtatgattgttgaagagaatggccataat
tctaatacacccccaaaacgaccattatctgaagagtccaatgtcacttctggagtaatt
gagatggtctctaaaccagctctttcatcccagacaattcagatttcagaagaacagact
tcagttcctactccagtgaaaaaacctagcaagacaaaacaacaaataaatgtgaaagca
gaattggagaagagacaaggaggaaaacagcttctgaatttagtggtaataggacatgtt
gatgcaggtaaaagtactttaatgggtcatttactttacctgttgggcaatgtgaacaaa
cgaactatgcataaatatgagcaggaatccaaaaaggctggcaaagcttcatttgcttat
gcatgggtgttggatgaaactggggaagaaagagaaaggggagtaacaatggatgtgggc
atgaccaaatttgagacaaagactaaagttattactttgatggatgctccaggccataaa
gatttcatcccaaatatgatcacaggagctgcacaggctgatgtggctatcttggttgta
gatgccagcagaggagagtttgaagcagggtttgagactggtggacagacacgagaacac
gggttgttggttcgctctctcggagtaacacaactggcagttgcagtcaataaaatggat
caggtcagttggcatcaggagagatttctggaaattaccagtaaacttggccagtttctt
aaacaagctggctttaaggagtctgatgtagcttatatccctacaagtggccttggtggt
gaaaatctagtctcagtatgtcaatcaagtgaactcactgaatggtataagggaaaatgt
ttgttagaacaaattgattctttcaaaccacctcagagatcagtggataaaccctttaga
ttatgcgtgtctgatgtctttaaagatcaaggatcaggattttgtgtgactggtaaaata
gaagcaggctatattcagactggagatagacttctagctatgcctcccaatgaaacttgc
actgcaaaaggaatcacactgcatgatgaaccagttgattgggctgcagcaggagatcac
gttagtctcactttgaccggcatggatattatcaaaatcaatgttggctgtgtattttgt
ggtctcaaagaacccatcaaagcatgcactcgtttcagagctcgtgtcctcatctttaat
attgaagtccccgttactaaaggattccctgtaagtcttcaactagttgtctctttgaac
attctgattttcttcataggtggctcagtattcttgttgatttaa
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