Pelodiscus sinensis (Chinese soft-shelled turtle): 102451644
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Entry
102451644 CDS
T02980
Symbol
TBC1D4
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 4
KO
K17902
TBC1 domain family member 4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102451644 (TBC1D4)
Membrane trafficking [BR:
pss04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102451644 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102451644 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
102451644 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3350
PID
DUF2226
DUF4249
TMPIT
Rootletin
Motif
Other DBs
NCBI-GeneID:
102451644
NCBI-ProteinID:
XP_014426252
Ensembl:
ENSPSIG00000016293
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MEKQGQDEPLPHPLELEPQPQSGGRAMGEKRFKLWYVGWSCLDRRTTLPMLPWLMAEIRR
RSQGKEPGGPLGSSVPAREVLLLLGSPNLRCVPATSSGSPGSAHPAAVXHISRFVHNSHD
LTYFAYLIKAQPDNPDSQVACHVFRATDPNQVPDVISSIRQVSKAALKEDAKPGKDSEDA
FYNSQKFEVLYCGKVTVAHKKAPSTLIDDCIEKFSLHERQRLKLLSEQRSTDSSSDLTLY
EGDVPASPSDSPFEEVEGSNAAIGIFTIGGQTNLAGARVSFPELXXXXXXXSRCSSLTAV
MQKRVHDTSLKTQPRRRHASAPSHVQPSDSEKNRTMLFQVGRFEINLISPDTKSVVLEKN
FKDISSCSQGIQHVDHFGFICRESVETGINQYVCYVFQCASESLVDEIMLTLKQAFSTAA
ALQNAKTQIKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLSSLTDNEQADIFERVQK
MKPVSDQEENELVILHLRQLCEAKQKTHVHIGEAPLNISNNAIPENTASSGRFKLDILKN
KAKKSLTSSLENIFSRGASRMRGRLGSMDSFERCSSLASDKDCSPGDSPPATPPASPVSS
VWQPFPEEDSDSPQFRRRAHTFSHPPSSSKRRITFQDGRSQSVKSPLLRQNSVEQSSPVS
TARQRFHSESGLPSSFSAPSFLKSFYQNSGRLLQQSENDLSKSDGEGRRRTSSVCSNESL
NASGATVTPRRISWRQRIFLRVASPMNKSSSAMQHQDGFEGNELLPLSPLAPALEEDPLS
LILQNKDAPDNAXXXXXQSLWRKAIHQQILLLRMEKENQKLEEASRDELQSRKIKLDYIE
VGTCQKDVINIWDKKLLNFRAKIRCDLEDIHITLKEGVPKSRRGEIWQFLAVQHRVRHRL
PSKQQPPNISYKELLKQLTAQQHAILVDLGRTFPTHPYFSTQLGAGQLSLFNLLKAYSLL
DKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRL
LHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVAL
SLLSSQESLVMECESFENIVDFLKGTIPDMSSLQMEKIITQVFEMDISKQLHAYEVEYHV
LQDELQEGLNPCDDSEPLEKLERANSQLKRQNMDLLEKLQIAHAKIQSLESSLENILSRE
NEMRSLIQSLQQEKMVYQKTVEQISKYLPAEALSDCELLLKEVNFNPNNKTKQGNKP
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagggccaggatgagccgctccctcaccccttggagctggagccgcagcct
cagtccgggggcagggcgatgggggagaagcgcttcaagctgtggtatgtgggctggtcc
tgcctggacagacggaccacgctgcccatgcttccctggctgatggcagagatccgcagg
cgcagccaagggaaggagcccggcgggccgctgggcagctcggtgcccgcccgggaggtg
ctgctgcttctgggctccccgaacctccgctgcgtccccgccacctccagcggcagcccc
ggcagcgcccaccccgccgcggtcnngcacatctcccgcttcgtccacaacagccacgat
ctcacctacttcgcctacctgatcaaggcgcagcccgacaaccccgactcgcaggtggct
tgccacgtcttccgggccactgaccccaaccaggttcctgatgtgatcagcagcataagg
caagtgtccaaagcagctctgaaagaggatgccaagcctggaaaggatagtgaagatgcc
ttctataattcccaaaaatttgaggttttatattgtggaaaggtgactgtggcccataag
aaagccccatccactctaattgatgattgcattgagaaatttagcctacatgagcgccag
cgcctgaaactgttgagcgaacagcggagcacagattccagctcagacttaaccttgtac
gaaggagacgtgccagcttccccatcagatagtccatttgaggaggtagaaggctcaaat
gctgccattgggatctttacaattggaggccagaccaacctggctggtgcccgtgtctcc
ttccctgagctannnnnnnnnnnnnnnnnnngctctcgctgcagcagcctcacagcagtt
atgcaaaaaagggttcatgataccagtctgaaaacacagccacgtaggagacatgcaagt
gcacccagtcatgttcagccctcggactctgagaagaacagaacaatgttgtttcaggtt
ggacgatttgaaattaacctcatcagcccagacaccaaatctgttgtgcttgaaaagaat
tttaaagatatctcctcatgttctcagggtatacaacatgttgaccactttggtttcatt
tgtcgggaatctgttgaaactgggatcaaccagtatgtgtgctatgtgttccagtgtgca
agtgaatctttggttgatgagataatgcttaccctgaaacaagcctttagcactgctgca
gctctacagaatgccaagactcagattaaactgtgtgaggcctgtcctatgcactcttta
cataaactctgtgaaagaattgaaggtctttacccaccaagagccaaacttgtaattcag
agacacctgtcatcactgactgataatgagcaagcagacatttttgaacgtgttcagaaa
atgaagcctgtgagtgaccaggaagaaaatgaacttgtgatcttacatttgcgacagttg
tgtgaagctaaacaaaagacacatgtccatattggcgaggcaccattgaacatttcaaat
aatgcaatcccagaaaacactgccagcagtggccggtttaaactcgacattctgaaaaac
aaggccaagaaatccttgactagttctctggaaaacatcttctcaaggggagccagcaga
atgcgaggccgtctgggcagtatggatagctttgaacgctgcagcagcttggcttctgat
aaggactgttcaccaggagattctcctccagccactcctccagcttcccctgtgtcctcg
gtctggcagccatttcccgaagaggactctgattctcctcagtttagaaggcgtgcgcac
actttcagccatccaccatccagttccaagagaaggattactttccaggacgggagatcc
cagagtgttaagtctcctcttctgagacaaaattctgtagaacagagcagtcctgtgtct
acagctcgacaacgatttcatagcgagagtggacttccttcttccttctctgccccctct
ttcctgaaaagcttttaccagaactcaggcaggctgctccagcagtcagaaaatgacctt
tccaagagtgatggagagggaaggagaaggacctcgtccgtctgcagcaacgagtctcta
aatgccagtggggccactgttaccccccgccgtatttcctggcggcagcgaatcttcctg
cgggttgcttcacccatgaacaagtcttcctctgcaatgcagcatcaagatggttttgaa
gggaatgaattgttaccactgtcccctcttgctccagctttggaggaggaccctctttct
ttgatattgcaaaacaaggatgccccggataatgctnngnnnnnnnnnntgcagagtctg
tggagaaaagctatccatcagcaaatcctactgcttcgaatggaaaaagaaaaccaaaag
ctggaagaagcaagcagagatgaactccagtcaaggaaaattaaactggactacattgaa
gttggtacatgtcagaaggatgtcataaatatctgggataagaaattattaaacttccgt
gccaaaatcagatgtgacctggaggatattcatatcaccctaaaagaaggtgtaccaaaa
agccgacggggagaaatttggcaatttctagctgtacaacatcgtgtaagacatagactg
ccaagcaaacaacaacctcctaacatctcatacaaagaactcttgaaacagctgactgct
cagcaacatgctatccttgtagatctaggaaggacgttccccacacatccttacttctcc
acccagctaggagcagggcaactgtcactcttcaatctcctgaaagcttattctttgctg
gacaaggaagtgggttattgccagggtatcagctttgtggccggagtactgcttctacac
atgagtgaggagcaagcctttgaaatgctgaaattcctcatgtatgatcttggctttcgt
aaacagtacaggccagacatgatgtcactgcagattcagatgtatcagctttcaagactc
ctccatgactatcacagagacctctataatcatcttgaagagaatgaaatcagccctagt
ctctatgctgcaccctggtttctcacattgtttgcttctcagtttccattaggatttgta
gccagagtttttgacattatctttcttcaaggaactgaagtcatatttaaagtagctctg
agtctacttagcagccaagaatcacttgtaatggaatgtgaaagctttgaaaatattgtt
gattttcttaaaggcactatcccagacatgagtagtcttcaaatggaaaagattattacc
caggtttttgagatggatatttccaaacagcttcatgcctatgaagtagagtaccatgta
ctacaggatgaactgcaggaaggtttgaatccctgtgatgacagtgaacctttggagaaa
ttggagagggccaacagtcagctaaagaggcagaacatggatttgttggagaagctacag
atcgctcatgctaaaattcagagtctggaatccagcctggaaaacatattgtcccgagag
aacgaaatgaggagcttaatccagtcactgcaacaagagaagatggtatatcaaaagacg
gtagagcaaataagtaaatacctgccagcagaagcgctgtctgactgtgaactgctccta
aaggaagtaaactttaacccaaacaataaaacaaagcaaggaaataagccataa
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