Pelodiscus sinensis (Chinese soft-shelled turtle): 102452102
Help
Entry
102452102 CDS
T02980
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102452102 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102452102 (RABGEF1)
Membrane trafficking [BR:
pss04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102452102 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
102452102 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
102452102
NCBI-ProteinID:
XP_014437284
Ensembl:
ENSPSIG00000006627
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MAEMLLSTEEMSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ
IQEDWELAERLQREEEEAYASSQNTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSR
TGAKKVAQERNLKQEQLGRERNADNILRDLKEIFTPSWELAFPTEAEIQEAKAPSPSINR
QVSIETDRASKEFIEFLKTYHKTGQDIYKQCKMFLEAMHRKRELSIEEQSECAQDFYQNV
AEKLQTRWKVSPEKVEKVMDQIEKYIMTRLYKYVFCPETTDDEKKDLVVQKRIRALHWVT
PQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITQCSKHIFNAIKITKNEP
ASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKL
DAQSLNLSQEDFDRYMSGQTSPKKQESENWSSDTCLGVKQMYKNLDLLSQLNERQERIVS
EAKKLERDLIDWTDGITKEVQDIVEKFPLEIKPKNQSLAAIDSENVENDKLPPPLQPQVY
AG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatgctgctaagcacggaagaaatgagcctaaagtctgaacgcagaggaatt
catgttgatcagtcagagctactctgcaagaaaggatgtggttactatggaaaccctgct
tggcagggcttctgttccaagtgctggagagaagagtaccataaggcaaggcagaagcag
attcaggaagactgggaactggcagagcgacttcagcgtgaggaggaagaagcctatgct
agtagtcagaatactcaaggagcacagtcgctcaccttttctaagtttgaggagaagaaa
acaaatgaaaagactcgcaaggtgaccactgtgaagaaattcttcagtgcgtcttccagg
acaggtgctaagaaggtggctcaagagagaaaccttaagcaagaacagctcgggagggag
cgaaatgctgataacattctcagggacttgaaggagatttttactccctcctgggagctg
gctttccccactgaagcagaaattcaggaagctaaggctcctagcccttctataaacagg
caggtcagcattgaaacagatcgagcatccaaggagttcatagagtttcttaagacctat
cataaaactggtcaagacatttataaacagtgcaaaatgtttttggaagcaatgcatcgc
aaaagggaattaagtattgaggaacaatctgaatgtgcccaggacttctatcaaaatgta
gctgaaaaattacagactcgttggaaagtttccccagaaaaagttgagaaagtaatggac
cagattgaaaaatacatcatgactcgattgtataaatacgtgttctgccctgaaacaact
gatgatgaaaagaaggatctggttgtccaaaagagaatcagggctctacattgggttact
ccacaaatgctgtgtgttcctgttaatgaagaaattccagaagtctctgatatggtagtg
aaagcaattacagatattatcgaaatggattcaaaacgtgtgcctcgtgataaattagca
tgcatcacccaatgcagcaaacatatcttcaacgctataaaaataacaaaaaatgaacca
gcttctgctgatgacttcttaccaacacttatatatattgttttgaagggaaacccaccc
cgtctgcagtccaacatccagtatataacccgcttctgtaatccaagcaggttaatgaca
ggagaggatggctactattttaccaatctgtgctgtgctgtggccttcatcgaaaagctg
gatgctcaatctttaaatctaagccaggaggattttgatcgctacatgtcgggccaaaca
tctccaaagaaacaagaatctgaaaactggtcgtctgatacatgcctaggtgttaaacag
atgtataaaaacttagacctcctgtctcaattgaatgagagacaggaaagaattgtcagt
gaagccaagaagctagagagagacctcatagattggactgatggaattactaaggaagtc
caagatattgttgaaaaatttccattggaaataaaaccaaaaaatcaatccttagcagct
attgactctgaaaatgtagaaaatgataaattgcccccaccattgcagcctcaggtttat
gctggatga
DBGET
integrated database retrieval system
