Pelodiscus sinensis (Chinese soft-shelled turtle): 102452242
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Entry
102452242 CDS
T02980
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04010
MAPK signaling pathway
pss04020
Calcium signaling pathway
pss04148
Efferocytosis
pss04218
Cellular senescence
pss04310
Wnt signaling pathway
pss04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102452242 (NFATC1)
04310 Wnt signaling pathway
102452242 (NFATC1)
04020 Calcium signaling pathway
102452242 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102452242 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
102452242 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102452242 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102452242 (NFATC1)
Transcription factors [BR:
pss03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
102452242 (NFATC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
102452242
NCBI-ProteinID:
XP_075777220
Ensembl:
ENSPSIG00000011711
LinkDB
All DBs
Position
2:100027473..100167817
Genome browser
AA seq
946 aa
AA seq
DB search
MPSPGLPAAKHFVAGPPPPARGRATSVAPQRSSRPCSGSMKSAEEEHYNYASSNINAGLP
LNVAHSSLSAPCHGLQTSNPVISIVPSTNHPSGYGGHIDSGASGYYLSPNVRPNGAPALE
SPRIEITTYLGLHHNNNQFFHDAEVEEAIPNTKRSPSTATLSLPNIEAYRDPSCLSPASS
LSSRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDTEEGYQRSMVACTLLNSPRH
SPSTSPRTSITEENWLSARNSRPSSPCNKRKYSLNGRQTSYSPHHSPTPSPHSSPRVSVT
DDTWLGNTTQYTSSAIVAAINALTTDSTIDMNDGIPIKSRKTALDHTPSMTLKTEPSGED
HGTISPTADLSPEEFSGFQHIRKGNFCDQFLSVPQHPYQWAKPKSLCPTSYMSPSLPALD
WQLPSHSGPYELRIEEQPKSHHRAHYETEGSRGAVKASAGGHPVVQLHGYLESEPLTLQL
FIGTADDRLLRPHAFYQVHRITGKTVSTTSHETILSNTKVLEIPLLPENKMRAIIDCAGI
LKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQSNGRTLSLQVASNPIECSQRSAQELP
LVEKQSTDSFPVIGGKKIILSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSL
VVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEPSDDYEPAQTCG
PMNQGLNPLSKPYYSQQIMMPPDPGSCLVAGFTSCQQRNTVMSSSPNSSPKLHDLSSSAY
KCITNPGHSHLGLQQPAGGVPTIQEVPRSIVVHPSSPEQSSHIMLQPQVSQHLSSSCSLG
YQQTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQHQLPKVQRNESPTNQPLSLPE
LHEDSNHNLAPIPVMIKREPEELDQLYLDDVNEIIRNDLSSTNVHS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccctggcctgcccgctgccaagcactttgtagccggacccccgccgccagct
cgtgggagagcgacctcggtggctccgcagcgctcgtcccgcccgtgcagcggcagcatg
aaatcagcggaggaagaacactataattatgcatcttcaaatataaatgccggtttgcct
ctaaatgtggcacattcctcattgtcagctccatgtcatggccttcagacatccaatcct
gtcatttcaattgtcccatcaacaaatcatccttctggatatggaggacacattgacagt
ggagcctctggatattatctgtctcccaatgtcagacctaatggagctccagcactagaa
agccccaggatagagataacgacttatctgggactgcaccataataacaaccagtttttc
catgatgctgaggttgaggaagcgatcccaaatactaagcgatcaccttctactgccact
ttgagtttaccaaacattgaggcttacagagacccatcttgcctgagtccagcaagtagc
ctgtcttccagaagttgcaattctgaagcttcatcctatgaatccaattattcttatcct
tatacttcgccacagacatctccatggcagtccccatgtgtgtctcctaagaccactgac
acagaggaaggatatcagcgtagtatggtggcctgtactttacttaattcaccaagacat
tctccatctacgtctcccagaacaagcataacagaggaaaactggctaagtgctcgcaac
tcaagaccatcttctccctgtaacaaaagaaaatacagcctaaatggcaggcagacttct
tactcaccacaccactctccgacaccttctcctcacagttctcctcgggttagtgtaact
gatgatacatggctgggaaatactacccagtataccagttctgctatagttgcagctatc
aatgcccttaccactgacagcacaatagacatgaatgatgggattcctattaagtctaga
aagactgcgctagatcataccccatccatgacactcaagactgaaccaagtggtgaggac
catgggaccatatcaccgacggctgatttatcaccagaagaattttctgggtttcagcac
atcaggaaaggaaacttctgtgatcagttcctttctgtgccgcagcatccataccaatgg
gccaaaccaaagtctctgtgtcccacatcatacatgagcccatccctgcctgcccttgat
tggcagctgccatctcactcaggaccttatgaacttcggattgaagagcagcccaaatcc
catcacagagctcattatgagactgagggaagtcgaggggcggtgaaggcctctgctggg
ggacatcctgttgtgcagctacacggttacttagaaagtgagccgctcacgctacagctg
ttcattgggactgcagacgaccgcctgctgagacctcatgccttctaccaggttcatcga
atcacagggaagactgtttccaccaccagccatgaaacaatactttccaacactaaagtc
ttggaaattccacttctaccagaaaacaagatgagagcaatcattgactgtgctgggata
ttaaaacttagaaattcagatattgaactccgaaaaggagaaacagacattggaaggaag
aatacacgagtgcggctggtcttccgagttcacatcccacaatccaacggaagaactctg
tctctgcaagtagcatccaatcctattgagtgttctcaaagatcagcccaggaattgcct
ttggtggagaagcaaagtactgacagctttcctgtgattggagggaaaaaaattatcctg
tctggccacaactttctacaagactccaaagtcatctttgtggagaaagcaccagatggt
caccatgtgtgggaaatggaagccaaaaccgacaaagaaatgtgcaaaccgaattccttg
gtggtggagataccacctttccgcaatcagagaattaccagtcctgttcaggttaacttc
tatgtctgcaacggaaagagaaagagaagccagtaccagctgttcacctatcttcctgct
aatgttccaattataaaaactgaacccagtgatgactatgagcctgctcaaacctgtgga
ccaatgaaccaaggattaaaccctctctctaaaccatactacagccagcagatcatgatg
cctcctgatcctggttcgtgccttgtggctggcttcacttcctgtcagcagcgaaacact
gtgatgtcatcctctcccaactcaagccccaagctgcatgatctttcatcttctgcttac
aagtgcatcaccaacccgggccacagtcacctaggacttcagcagcctgctggcggggtc
cctaccatacaggaagtgccaaggtctatagttgtgcacccaagttctccagagcaatca
tctcacatcatgctgcagccgcaggtgagtcaacatctgagcagtagctgttcccttggt
taccaacaaacactctatcccaacagtccctcctctccagttccatctgttacccaagag
ccaacctatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcagcac
caactgccgaaggttcaaagaaatgagtctccaacaaaccaaccactctcattgccagag
ttgcatgaggacagtaatcataatttggcccctattcctgtaatgatcaagcgagaacct
gaggaattggaccagttgtacttggatgatgtaaatgaaattataaggaatgacctctcc
agcaccaatgtccattcatag
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