Pelodiscus sinensis (Chinese soft-shelled turtle): 102452356
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Entry
102452356 CDS
T02980
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04010
MAPK signaling pathway
pss04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102452356 (CACNA1B)
04020 Calcium signaling pathway
102452356 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102452356 (CACNA1B)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102452356 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Tachystatin_A
Motif
Other DBs
NCBI-GeneID:
102452356
NCBI-ProteinID:
XP_014436145
Ensembl:
ENSPSIG00000010322
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MYKQSMAQRARTMALYNPIPVKQNCFTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILA
TIIANCIVLALEQHLPEDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLR
NGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPL
LQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSNETGEEIGDFPCGEDPPARQCENGTTCR
KYWPGPNYGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGS
FFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED
KNAEEKSPLDGRAASEGPVQQGTASTEPGSGSYNMLKRATIKKSKNDLIHAEEAEDHFTD
ICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWIVLCVVTLNTLCVA
MVHYDQPEGLTNALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFE
VIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFI
VVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIVSQGGVH
SGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKE
VAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHN
FRASCEALYNELNPEERVLYATTLHIRPDMKTHLDRPLVVEPRTDGRNNVSKLSPGDIQE
TEQAKVTAADSAEVPRKHHRHRDRDKVGEQEKSDMAKDENGESGTNSKEERHRQHRSRSK
EAEGGSKEGKSERNRSQEGGKRHHRRGSVEEGAEKEYRRHRPHRHAAERQAKEGNGTING
ARSERRSRHRGGSRSGNRESDPGMKGENGEEPHRRHKMRQKALSTYDSVEKENGEKEGET
GEKDLRNHQPKETQFEIEAGGSVSVVPAHTLPSTYLQKVPEQPEDADNQKNVTRMTQPPL
DKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKKDMEVDDLTKNGPKPILPYSSMFI
LSPTNPIRRLFHYIVNMRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTG
VFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIK
SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF
FYCTDESKELEKDCRGQYLDYEKSEVEAQPRQWQKYEFHYDNVLWALLTLFTVSTGEGWP
TVLKHSVDATHEDQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMS
ECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMAMIALNTIVL
MMKFYDAPETYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSIT
DILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAM
LFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNR
ACDKLSGLTKNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHL
DEFIRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISDQD
LTVHFTSTLMALIRTALEIKLATAGVQQHQCDSELRKEISLVWPNLSQKTLDLLVPPHKQ
DEMTVGKVYAALMIFDFYKQNKNSRDQAHQPPGGLCQTGPVSLFHPLKATLEQTQPLVFN
NAKAFLRQKSSASLNNGGTLPAPESGIKESVSWGTQHTQDVFYETRTPAFERGHSEEIPI
ERTSKQVVEMREISPTLANGDHQPGLESQGRAASMPRLAAETQRSKTRSPGSYLAPIPDT
SPMKRSISTLTPQRPHPMHLYEYSLERMPPDHTHHHHHHRCHRRKDKKQKSLDKPPNQLA
DGDAGEASSKDKKQERGRSQERKLHSSSSSEKQRFYSCDRYGSRDRSQPKSADHSRPTSP
NGGLEPGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHF
TSFQTSLPTFSPGRLSRGLSEHNALLQRDSQSHAHSMVARIGSDPYLGHRDDSDSPYRVV
PEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGLSTGPGTCARARSY
YHEADEDDWC
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcagtcgatggctcagcgagccaggaccatggctctctacaaccccatcccc
gtcaagcagaactgcttcaccgtcaaccggtccctcttcatcttcagcgaggataacgtt
atccggaaatacgccaagagaataaccgaatggcctccatttgaatacatgattttagcg
acaatcatagccaactgcattgttctggctttggagcagcatctaccagaggatgacaag
acgcccatgtcagagagattggatgataccgagccatactttattggaatattttgtttt
gaagcgggtataaaaatcatcgccctggggtttgtttttcacaaaggctcttatctccga
aatggctggaacgtgatggattttgtcgttgtcctcacagggattctagccactgccggg
actgattttgacttacgcaccctgcgagctgttcgggtattgagacctttgaagctggtg
tcaggaattccaagtttgcaggttgtcctcaagtccatcatgaaggctatggtgcccttg
ctccagattgggctgcttctcttctttgcgattgtgatgttcgccatcattgggctggag
ttctacatggggaagtttcataaaacctgcttctcaaatgaaacaggtgaggagatcgga
gattttccttgcggagaggatccacctgccaggcaatgtgagaatggaaccacatgcagg
aaatactggccgggccccaactatggaatcaccaactttgacaatatcctgtttgcggtg
ctaactgtcttccagtgcatcaccatggagggctggacggacatcctgtacaacactaat
gatgcggcaggaaatacctggaactggctttacttcatcccgcttatcatcattggctct
ttcttcatgctcaacctggtgctgggtgtcttatcaggcgagttcgccaaagagcgcgag
agggtagagaaccgccgggccttcctgaagctgcgtaggcagcagcagattgaacgagaa
ctaaatgggtacttggagtggatcttcaaggcagaggaggtgatgctggcagaagaagac
aagaatgcggaagagaagtcccctctggacgggagggccgcctccgaggggccagttcag
caaggcacagcatcgacggagcctggcagcggcagctacaacatgttgaaaagagcgaca
ataaagaagagcaaaaacgacctgattcatgctgaagaggcggaggatcatttcactgac
atttgctccgtggggtctccatttgcccgtgccagcctgaagagcggaaagaatgagagc
tcctcatatttccggaggaaagagaagatgttccggttcttcatccggcgcatggtgaaa
gcacaaagcttctactggattgtcctgtgtgtggttaccctgaacactttgtgcgtcgcc
atggtgcattatgaccagccagaggggctcaccaacgcgctgtattttgcagagtttgtt
ttcctgggtctgttccttactgagatgtccttgaagatgtacggactagggccccgaaat
tacttccactcctcattcaactgctttgactttggggtgatcgtggggagcatttttgaa
gtgatttgggcagcggtgaagcctggtacctcgtttggcatcagtgtactgagggctctt
cggctgctgaggattttcaaagtaaccaaatactggaactccctaaggaatctcgtggta
tccttgctgaactccatgaaatccatcatcagtttgctcttcctgcttttcttgttcatt
gtggtgttcgctctgctgggaatgcagctctttggaggacaatttaattttcaagatgaa
acgccgaccaccaacttcgatacgttccctgctgccatcctcactgtgttccagatactg
actggtgaagactggaatgcagtgatgtatcatgggattgtatcacaaggtggtgtccac
tcaggaatgttttcttccatttacttcatcatcctgacattgtttggtaactacacactc
ctgaacgtcttcttggctattgctgtcgacaatcttgcgaatgcacaagagctgaccaag
gatgaagaggagatggaagaggctaccaatcagaagcttgcgctccaaaaggccaaggag
gtagcagaagtcagtcccatgtctgcagctaatatttccatagcagcttttgtaaagcaa
actcgaggtactgtatctcgcagctcgtcagtctccagcgtaaattcacccaaacagcag
aactcctccaaatccaagtccgtctgggagcagaggactagccagatcaggatgcacaat
ttccgggccagctgcgaggcgctgtacaatgagctcaatcccgaggagcgtgtgctctac
gctaccaccctccacatccggccagacatgaagacccacttggatcggccgctggtggtg
gagccaaggactgacggcaggaacaatgtgagtaagctaagcccgggggacattcaggag
actgagcaggccaaggtgaccgctgccgacagtgcagaggtgccccgaaagcaccaccgg
catcgggatagagacaaggtgggagaacaggagaagagcgacatggcgaaggatgagaac
ggggagtccggcacaaacagtaaggaggaacggcaccggcagcacaggagtcgcagcaaa
gaggcagagggaggcagtaaggaaggaaaaagtgagcgcaacagaagccaggaagggggt
aagaggcaccatcgccggggctcagtggaggaaggggccgagaaggagtaccggcggcac
cggcctcaccggcatgcggcggagcggcaagccaaggaaggcaacgggacaatcaatggg
gcccggagtgagcggcgttcgcgtcaccgaggagggtcaaggtcagggaaccgggaaagt
gatcccggcatgaaaggagagaatggggaagagccccacagacggcacaagatgcggcag
aaagctctgtcaacctatgattcggtggaaaaggagaatggggagaaagaaggagagacg
ggggagaaagaccttaggaaccatcagcccaaggagactcagtttgagatcgaggctggg
ggtagcgtgagtgtcgtcccagcccataccctgcccagcacctacctgcagaaagtgcct
gaacagccagaagatgctgacaaccagaagaatgtgactcggatgactcagccaccactg
gacaaaaccaccactgtgaacatccctgtcaccatcactgcacctcctggggagaccact
gtcataccaatgaacaacgttgaatttgaaagcaaaacagaagagaagaaggatatggag
gttgacgacttgacaaaaaatgggcctaagccaatcctgccttacagctccatgtttatc
ttaagccctacgaacccaatccgacgcctgttccattacattgtgaacatgcgctacttt
gagatggtcatcctcatagtcatcgccctgagcagcattgccctggctgctgaagaccct
gtccaagccgagtctccacggaacgatgcgctgaagtatctggattacatatttacaggg
gtctttaccttcgagatggtgataaagatgattgacttggggctgctgcttcatcctggc
tcctatttccgtgacctgtggaacatcctggattttattgtggtcagtggggccttggtg
gcatttgccttctcgagtttcatgggaggaagcaaaggcaaagacatcaacacaatcaag
tccctgcgagtcctgcgagtcctaagacccttgaagaccataaagcgtctgcccaagtta
aaggctgtctttgactgcgttgtgaattctctgaagaatgtcctcaatattctgattgtt
tacatgctcttcatgttcatctttgctgtcattgctgtgcaactcttcaaaggcaaattc
ttctactgcacggatgagtccaaggagctagagaaggactgcaggggccagtatttggat
tatgaaaagagtgaggtggaggcacagcccaggcagtggcaaaaatatgagtttcactat
gacaacgtgctttgggctctgttaacactgttcactgtgtccacaggagaagggtggccg
actgtgttgaagcactcggtggatgctacacatgaagaccagggtcccagccctggctat
cgaatggaaatgtccatcttttacgtggtgtactttgttgtcttccccttcttctttgtg
aatatctttgtggcgttaattatcatcaccttccaggagcaaggagataaagtgatgtca
gaatgcagcctagaaaaaaatgagagggcctgcatagacttcgccataagtgccaaacca
ctgacccggtacatgcctcaaaacaagcagtcgtttcagtacaagatgtggaagtttgtg
gtgtcccctccctttgaatattttatcatggccatgattgcgctcaacactattgtgctg
atgatgaagttctacgatgctccagagacatatgaagaaatgttgaaatgcctgaatatt
gtgtttacatccatgttttcaatggaatgtgttttgaagatcattgcctttggagtactg
aattatttccgagatgcctggaatgtctttgatttcgtaacagtattgggaagtattact
gatattttagtaacagagattgcggacacggataacttcatcaacctcagcttcctgagg
ctcttcagggctgccagactcatcaaacttcttcgccagggctacaccatccgcattctg
ctctggacatttgtacaatcttttaaggccttgccttatgtgtgtctcctcattgcgatg
ctcttcttcatctacgccattatcggcatgcaggtatttggaaacattgcactagacgat
gatacctcgattaatcgacacaacaacttcagaactttcttgcaagccctgatgctattg
ttcaggagtgccaccggggaagcttggcatgagatcatgctctcctgcctcagtaacaga
gcctgcgacaaactctccggcctcaccaaaaacgaatgtggcagtgactttgcctatttt
tacttcgtctctttcatcttcctttgttcctttctgatgttgaacctgtttgtagctgta
atcatggacaactttgagtacctgacacgagactcttccatcctaggaccccatcacctt
gatgagttcattcgggtctgggctgaatacgacccagctgcctgtgggcgcatcagttac
actgacatgtatgagatgctgagacacatgtccccacctctaggcctgggaaagaaatgc
cctgctcgagttgcctataagcgcctggtgcggatgaacatgccgatctcggaccaggac
ttaacggtccacttcacttccacgctgatggccttgatccggaccgctctagaaatcaaa
ctggcgacagcgggcgtgcagcagcaccagtgtgattctgagctgaggaaagagatctct
ctggtctggcccaacctgtcccagaagacattggatttgttggtgcctccccataaacag
gatgaaatgactgtggggaaggtctatgcagcactcatgatattcgacttctacaagcag
aataaaaacagcagggaccaagcgcaccagccacctggaggtctttgccagactggacca
gtgtcattgttccaccccttgaaagcaaccctcgagcaaacccagcctctggtgttcaac
aacgctaaagccttcctccgccagaaaagttccgcctcgctcaacaacgggggcacactg
ccagccccggagagcgggatcaaggagtctgtttcctgggggactcagcacactcaggat
gtgttttatgaaactaggacaccagcttttgagcgaggccactcggaagaaattcccatt
gagcggacaagcaaacaggttgtggaaatgagagaaatcagccccaccttggccaatgga
gaccaccaacctggcttggagagccaggggcgggcggcttccatgccgcgtctggccgcc
gaaactcagaggagcaaaacacggtcaccggggagttacctggcacccattccagacacc
agccccatgaagcgctccatctccacgctgaccccacagcgcccgcatcccatgcacctg
tacgaatattccctggagcgcatgcccccggaccacactcatcaccaccatcaccatcgc
tgccatcgacggaaagacaagaagcagaagtcgctggacaagccgcccaaccagctggct
gacggagatgctggcgaggcttcttccaaggataagaagcaagaacgaggcaggtcacaa
gagagaaagctgcactcctcctcgtcctctgaaaaacagcgcttctactcctgcgaccgc
tacgggagccgggaccgttctcaacccaagtcagctgatcacagcaggcccacctcgccc
aatgggggcctggagccaggtccccacagacagggtagtggttcagttaatgggagcccc
ttgctgtcgacatctggtgctagcaccccgtgccgcgggcggaggcagctcccgcagact
ccgttgaccccccgccccagcatcacttacaagaccgccaactcctcacccgtacacttc
accagtttccaaaccagcctgcccacgttctccccgggacgcctgagccgaggtttgtct
gagcataacgcgctactgcaaagggactctcagagccacgcacattccatggtggcccgc
attggttccgacccctaccttggacaccgtgacgacagcgacagcccgtaccgcgtcgtg
ccggaggacacgctcaccttcgaggaggctgttgccaccaattcaggaaggtcctcgagg
acttcttatgtctcgtccttgacttcccagtctcaccaaatccgcagggttcccaacggc
taccactacacgttgggcctcagcacgggccctgggacatgcgcccgcgcacgcagctat
taccacgaagccgacgaggatgactggtgctag
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integrated database retrieval system
