Pelodiscus sinensis (Chinese soft-shelled turtle): 102452402
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Entry
102452402 CDS
T02980
Name
(RefSeq) LOW QUALITY PROTEIN: 2-5A-dependent ribonuclease-like
KO
K01165
ribonuclease L
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04621
NOD-like receptor signaling pathway
pss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102452402
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102452402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ribonuc_2-5A
Ank_3
Ank_5
Pkinase
PK_Tyr_Ser-Thr
TCAD9
Kdo
ANK_LRRK2
APH
RIO1
ABC1
Choline_kinase
Knl-2-like_dom
Motif
Other DBs
NCBI-GeneID:
102452402
NCBI-ProteinID:
XP_025042371
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAAPSNTQPGSPNSCRNEPTAAKVSQLQKAVKEGSVERARQLLEEGADVNGRVEGGWTPL
HTAVQANREEMVHLLLEHGAEPCARKDNGATPFIIAGIVGNVNLLQLFLSKGSEIDETDN
NGFTAFMEAAYYGKQEALKFLYETFSGEKERYVNLGRVVSTQQRQVHKGGETALMDAARK
GHISAVQTLVEHMGASVRTXVALQLPQKRNTILKQNKTGPIVSYLLDCGADVTGRDENGK
TSLILAAERQSLELVDLLLRTGQVDINAMGHDGKTALKVAVEYDHEEIARLLCENGARVD
GSNVEVAKLNYNNEMAALLLKFGDMAINSRPPKEWEPISKRWGEQLRRLHSINSPQIGKL
NVQFDEYYRIESTSEGGIYLGFHAGAEVAVKRFLLGSEKAKREATCLRHSLSNRHMVKLH
GTETRDNCQLFCLSLCERNLEDHLSNAKRAVNCHHILQTLLEAVRDLHSLELGHGDLHPR
NILIDADDKVLLADFDQSSSFAEGQRELIIKEDLEALGRLVPYVVSKGEVPFDGPDGEDV
AARCPMDVPGHLEIKDLIRSLTSPNGGNSAQLGDLIHHPFFWSRERFEFLAEVGNNPDIE
KNITESRIVKALNCNESKHLSGVAQWTKKIDQSVLKNMNQKRKYTYQDSVTDLLRFIRNI
RAHYDAKPQWFKEIIQNPSRYFVDQFPRLTLYVYECLRHADGAALKKILHRILKGYSPS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccagcaacacccagccaggatcaccaaacagctgcagaaatgaaccaacg
gccgccaaagtgtctcagttgcagaaggctgtcaaagaaggctcagtcgagagagcccgg
cagctgttggaggaaggtgcagatgtcaatggcagggtagaaggtggttggacacccttg
cacactgcggtacaggctaatcgggaggagatggttcaccttcttcttgagcatggtgct
gagccatgtgctagaaaggacaacggtgccactccctttattatcgcaggcatagtgggg
aatgtgaaccttttgcagctcttcctttccaaggggtcggaaattgatgagactgataac
aacggcttcaccgcctttatggaggcggcttattacgggaagcaggaggccttgaagttc
ttgtatgagactttctcaggtgagaaagagagatatgtgaatttgggccgggtggtcagt
acacagcaaagacaagtgcacaaaggtggggaaacggccctgatggatgctgccaggaaa
ggtcacatctcagctgtgcaaaccctcgtggagcacatgggggccagtgtgcgtaccnnt
gtggccttacagctgcctcagaagaggaacaccattcttaaacaaaacaagacaggaccg
attgtttcctatctgctggactgtggcgctgatgttaccggaagagatgaaaatggaaag
acttcactcatcttggcagcagagaggcaaagcctggagttggtggacttgctcctgagg
acaggccaagttgacattaatgccatgggccacgatggcaaaaccgcgctgaaggtagct
gtggaatacgaccatgaggaaatcgcaaggctgttatgtgagaacggagccagggtagat
ggcagcaatgtcgaggtggccaaactgaactacaacaatgaaatggcagccctgctgctc
aaattcggtgacatggctattaatagtcggcctcctaaagaatgggaacccatcagcaaa
cgctggggagagcagctacggcgtctccacagtatcaattcccctcagatcggaaaactc
aacgtccagtttgacgagtattaccgcattgagagcacctcggaaggaggcatctaccta
gggttccatgcaggggcagaggtggccgtgaagaggttccttctgggcagcgagaaggct
aagcgagaagccacgtgtctccgtcacagccttagcaacaggcatatggtgaaacttcat
gggactgaaactcgtgacaactgccagctcttctgcctctccctctgtgagaggaacctt
gaggatcatctgagcaacgccaaacgggcagtgaattgtcaccacatcctccagacgctc
ttggaagcagtgagagatctgcactccttggaattaggccacggagacctgcacccacga
aacattttgatagatgcggatgataaagttctccttgcagattttgatcagagtagcagt
tttgctgaaggtcaaagggaacttataatcaaagaagacttggaggcacttggaaggctg
gtcccgtatgttgtatcaaagggtgaagtcccttttgatggacctgatggagaggatgtg
gcagcaagatgtccgatggatgtgccaggtcacctggagattaaagatctcataagaagt
ttgacctcccccaatggaggaaactcagctcagttaggagacttgatccaccatcccttt
ttctggagccgggagaggtttgagttccttgcggaggttgggaataatccagacatcgaa
aaaaacataacggagagccggattgtgaaagctttgaattgcaatgagtcaaagcacctc
tcaggtgttgcccagtggactaagaagattgatcaaagtgtcctaaaaaacatgaaccag
aaaaggaaatacacctatcaagacagtgtcactgaccttttgaggttcatcagaaacata
agggcacactatgatgcaaaaccacaatggttcaaggaaataatccagaacccatcaagg
tattttgttgaccagtttccacgtctgacactttacgtctatgagtgtttgcgccatgcg
gacggagctgccctaaagaagatccttcatcgtattctcaaaggctacagtcccagctga
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