Pelodiscus sinensis (Chinese soft-shelled turtle): 102452474
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Entry
102452474 CDS
T02980
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pss01001
]
102452474 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pss04054
]
102452474 (CIITA)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102452474 (CIITA)
Protein kinases [BR:
pss01001
]
Serine/threonine kinases: Other
TAF1 family
102452474 (CIITA)
Pattern recognition receptors [BR:
pss04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102452474 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
NB-ARC
LRR_8
LRR_9
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
102452474
NCBI-ProteinID:
XP_014427762
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MNLFKKILPGVREILSSGTTSDVHALLSCMLEGDVISKEYHQNLLQEKDREDLARKISLT
LVEKWDLCLNTLVPLHCLKLYSNMPQDITDHEPSLNRGIAGSKRQTMDSAVLTENSFLDL
LHSNIDPLHLYSLLDTRLSNEDEENELSIDPEIDTNSHDQFSNLDVFYTTESNESEEETL
FSNTGEAYSRIAGLAEYVLKDQQERQMEDIFGKLILDEMSNETTEGFMEIKKQKCQKRSF
VNTAENYSDASKPKCRRTEAAKRVKEGVCTEDSRAVGNIRATCQDRVESPRSPVNGSFVA
MPLNCSPANSTSSSYLNMPFSVTNISPNGKNVVMSVSSGNSNPDCLVVGAKGIQVISSFT
VLPEQIINLTAWNGASNIIIYPVSSSLSETLPMSSDFPTTLAAQVDLAVQSILGPSDKNT
SMDPYAYRPETAAMTDQAGKEIFNEISQILDVPSAQIFKRPKPVEAFCASLKDYFQDVCK
FMAMDREVTLDQLYIDGAFMQGQTEIKSGKNLIKVMEKELVIYNLEEKEKAAIERSQIFQ
VPGGKELETKVIVVLGKAGMGKSILVQKICQDWSNGKFSQFEFVFWFECRRLSLPEKQYS
LKDLLLELFVKPREGSDKVFEYILKNPDKVLLIFDGFEELQVHDGFTHYSDCQSYKECYS
IRELFAGLFQKKILSGCTLLLTARPKDKFSQYLSKVDKIIEMVGFIPQQIESYIARYFEG
LPYCDEAVKSIKDCQYLFSHCYSPVICKFICFFCEMMFEMGDKDLPSTLTTLFVKYLQQK
LMPTQTDATAIQNQQHITTLAQVAWYLGEKNQNALKSSLFPSKEVKEFALKYGLLLPFTF
PNHSGNGEEEFGSAFSDYVIQNFLSAVHLVLAEEIKDKSLTKYLSLPSRKKRPHNWLDLV
PRFLPGLLYLQPDPYLFSLSDEHRRKIITKKQKTLLKYIKKIQISELHPKKLLELFHCVY
ETQDSYLLQHVALRLKPELSFLGTPLTPPDVYVLHFILKRSQKEFSLDLRNSGINLQGLK
HLSGLKNVISFRASLSDVVRLWESLEETKEYELLRISVEKFGIDPFKAEKMKDISDLSDL
VHMQEKVIHCMEDASGCNFYEIPAIKNLRKLEFALGPVCGLQGFLKLVDILAAFSSLQHL
DLDALSENEIGDEGAKRLCEVFSKLTSLETLNLSQNKITDLGAEQLATALPSLASLKTLS
LYNNYICDAGAENIARILPAMASLRVLHVQCNKITDAGAQKLTDSLRKCPHIESVAMWNP
TIPYGVLEYLQQLDSRISLL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcaaaaagatcctgcctggagtcagggaaattctctccagtggcacaact
tctgatgtccatgcattgctcagttgcatgttggagggtgatgttatatccaaggaatat
catcagaacttactccaggaaaaagacagagaagacctagcaaggaagatctctctaaca
cttgtggaaaaatgggatttgtgtttgaacaccttagttcctctccattgtttaaaacta
tacagtaatatgccacaagacatcacagatcatgagccatctctgaacaggggtatagct
ggtagcaaaagacaaaccatggattcagcagttttgactgaaaatagctttcttgatttg
ctgcacagcaatatcgatccattacatctatacagtctcttggacacaagattatctaat
gaagatgaagaaaatgaactttcaatagatcctgaaattgataccaacagccatgatcag
tttagcaatttggatgtcttttatacaacagaaagcaatgaaagtgaagaagaaactctc
ttttcaaatacaggagaagcttattctagaatagctggattagcagaatatgtgctcaaa
gatcagcaggagagacagatggaagacatttttggaaaactcatattggatgaaatgtcg
aatgaaactacagagggttttatggagataaagaagcaaaaatgtcagaaacgatcattc
gtgaacactgcagagaattactctgatgcttccaagcccaaatgcaggagaacagaagca
gcaaagcgggtgaaggaaggagtatgtacagaagacagcagagctgttgggaatataaga
gccacttgccaggatagagtggagtcccccaggtctccagtcaatggcagttttgtggca
atgcctctgaactgctccccagctaactctacctcttcgtcttacctgaacatgccgttt
tctgttaccaatataagtccaaatggaaaaaatgttgtgatgtcagtgtcttctggaaat
tccaacccagactgtcttgttgttggtgctaaaggcatccaagtgatatcaagctttaca
gttcttcctgagcaaataattaatttgactgcatggaatggcgcatccaatattataata
tatccagtgtcctcctcactcagtgaaacattacctatgtcatcggatttccccacaacg
ctggctgctcaagtggacttggctgttcaaagcattttgggaccttctgacaaaaacacc
tccatggacccctatgcttacaggccagagactgcagctatgactgatcaagcagggaaa
gaaatattcaatgagatatcacaaatacttgatgttccttcggcacaaattttcaaaagg
ccaaagccagtggaagctttctgtgcatcacttaaagattattttcaagatgtgtgcaaa
ttcatggccatggaccgtgaagtgactctcgatcaactttacattgatggggctttcatg
caaggccaaaccgaaataaagagtgggaaaaatctcataaaggtgatggagaaggagctg
gtaatatacaatttagaagagaaggaaaaagcagctatagaaagaagccagatatttcaa
gtcccaggagggaaagaactagagaccaaagtcattgtagttttgggaaaggcaggaatg
ggtaaaagcattcttgttcaaaagatctgccaagattggtccaatggaaagttttctcag
tttgaatttgtcttttggtttgagtgcagacgactgagcctaccggagaagcaatacagc
ttgaaggatctgctacttgaactctttgtcaaaccccgagagggaagtgacaaagtcttt
gagtacatactgaaaaatcctgataaagtcctactcatcttcgatggttttgaagagtta
caggttcatgatggctttacacattactcagactgccaatcttataaggagtgctacagc
atcagggagctctttgcagggctctttcagaagaagatactcagtggttgtactttattg
ctaacagcaagacccaaagataaatttagtcagtatttatccaaagtggacaagattatt
gaaatggtagggttcataccacaacagatagaatcatatatagccagatattttgaaggg
ctaccatactgtgatgaggcagtgaaatcaatcaaagattgtcaatatctgttcagccat
tgctacagccctgtcatatgtaaattcatttgttttttctgtgagatgatgtttgaaatg
ggagacaaagatctgccttcaacacttaccaccctctttgtaaaatacctccagcaaaag
ttaatgcctacacaaacggatgcgacagccatacaaaatcaacagcacattaccacgcta
gctcaggtagcctggtatcttggagaaaagaaccaaaatgccctgaagagcagtcttttt
ccctctaaagaagttaaggaatttgctctgaaatatggcttactgttgccatttacattc
ccaaatcattcggggaatggggaagaagaatttgggagtgcattctcagactatgttatc
caaaattttctgagtgcagttcatcttgtgcttgcagaagagatcaaggataaaagcctc
acaaagtacctttcattaccatccaggaaaaaaaggcctcacaactggttggacttggtg
cctcgattcttgcctgggttattgtacctccagcccgatccctacctcttctctctttca
gatgagcatagaaggaaaatcataactaagaagcagaaaacactcttaaaatatattaaa
aaaatacagataagtgaactccacccaaaaaagctactagagttgttccactgtgtttat
gaaacacaggacagctatcttttgcagcatgtggctttaaggctgaaacctgaactttct
tttctgggcactcctcttactcccccagatgtctatgtgctgcattttattttaaaaaga
tcacaaaaggagttttccttggatttgaggaacagtggtattaacctacaagggctgaaa
cacctgtctggcctaaagaatgtgatctcattcagggcttcacttagcgatgtagtcagg
ctctgggagtccttagaggaaacaaaggaatacgagctgctgaggatttcagttgagaaa
tttggtattgatccctttaaggcagaaaaaatgaaggacattagtgatctttctgacctg
gtacatatgcaagagaaagtgatccactgcatggaagatgcctctggctgcaatttttat
gaaattcctgctatcaaaaaccttagaaaactagaatttgcgctgggtccagtctgtggg
cttcagggattcttaaagcttgttgatattcttgctgcattctcatctcttcagcattta
gacctggatgctctgagtgaaaatgaaatcggagatgagggagcaaaacgtctctgtgaa
gtattttctaagctgacatcactggaaacattgaacttatcacagaacaagataacagat
ctgggtgcagaacaactagctactgctcttccctccttagcttcattaaagacacttagt
ttgtacaataactacatttgtgatgctggagcagaaaatattgcaagaatacttcctgca
atggcatctttaagggttctacatgttcagtgtaacaagataactgatgctggagctcag
aagctgactgatagcctcagaaaatgtccccacatcgagagtgtggcgatgtggaatcct
accattccttatggagttcttgagtaccttcaacagctggactccagaatcagtttgctg
tag
DBGET
integrated database retrieval system
