Pelodiscus sinensis (Chinese soft-shelled turtle): 102453609
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Entry
102453609 CDS
T02980
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X3
KO
K05699
actinin alpha 1/4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04517
IgSF CAM signaling
pss04518
Integrin signaling
pss04519
Cadherin signaling
pss04520
Adherens junction
pss04530
Tight junction
pss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102453609 (ACTN1)
04518 Integrin signaling
102453609 (ACTN1)
04519 Cadherin signaling
102453609 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102453609 (ACTN1)
04520 Adherens junction
102453609 (ACTN1)
04530 Tight junction
102453609 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102453609 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102453609 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pss04812
]
102453609 (ACTN1)
04147 Exosome [BR:
pss04147
]
102453609 (ACTN1)
Membrane trafficking [BR:
pss04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102453609 (ACTN1)
Cytoskeleton proteins [BR:
pss04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102453609 (ACTN1)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102453609 (ACTN1)
Exosomal proteins of colorectal cancer cells
102453609 (ACTN1)
Exosomal proteins of bladder cancer cells
102453609 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
102453609
NCBI-ProteinID:
XP_006130345
Ensembl:
ENSPSIG00000008776
LinkDB
All DBs
Position
4:71232325..71392384
Genome browser
AA seq
914 aa
AA seq
DB search
MDHYDSQQTNDYMQPEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIDNIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQHK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYSGPDAVPGALD
YMSFSTALYGESDL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggatcattatgactcgcagcaaaccaatgactacatgcagccggaggacgactgggat
agggacatgcttttggatccagcctgggaaaaacagcagagaaagacattcacagcatgg
tgtaactctcacctccgcaaggctggcacgcaaattgacaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtctagctaagcct
gaaagaggcaaaatgcgagtacacaaaatctccaatgtgaacaaggccctggatttcatt
gctagcaaaggagtgaagctggtgtcaattggagcagaagaaattgtggatggaaatgtt
aaaatgacccttggaatgatctggaccatcatccttcgctttgccattcaggatatctct
gtggaagagacatctgctaaagaagggcttttgttatggtgtcagaggaagacagccccc
tacaaaaatgtgaacattcagaatttccacatcagctggaaggatggccttggcttctgt
gctttgattcacagacatcgcccagagctcatcgactacggaaagctgcgaaaggacgat
cctcttaccaatctgaacacagccttcgatgtggctgagaagtacctggatatcccgaag
atgttggatgcagaagacattgttggaactgcccgccctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagccaat
cgtatttgcaaagtgctagcagtcaatcaggagaatgaacagctcatggaagactatgaa
aagctggccagtgatttgctggaatggatccgccgtaccattccctggctggagaatcgg
gcacccgagaacaccatgcaagccatgcagcagaaattggaggacttccgggattaccgt
cgcctccacaaacctcccaaagtccaggagaagtgccagcttgaaatcaatttcaatact
ttgcagaccaagctgcggctcagcaacaggccagcgttcatgccttcagaggggaaaatg
gtttcggacataaacaatgcatggggaggcctagagcaggctgagaagggctatgaggaa
tggctgttgaatgagatccgaaggctagagaggctggatcacctggctgagaagttccgg
cagaaagcttccattcacgagtcctggacagatggtaaggaggcaatgctgcagcataag
gattatgaaactgctaccctgtcagagataaaggccctgctgaagaaacatgaggccttt
gagagcgacctggctgctcaccaggaccgtgtggagcagattgctgctattgcacaagaa
ctcaatgagctggactattatgactcaccaagtgtcaacgccagatgccagaagatatgt
gaccaatgggacaatctgggtgctttaacccagaaacgtagagaagccttagagaggaca
gagaagctgctggagacaattgaccaactctacctggaatatgccaaacgagccgcgcct
ttcaataactggatggagggggctatggaggatctacaggacaccttcattgttcatacc
atagaggagatccagggattgaccactgcccatgaacagttcaaggccactttgccagat
gccgacaaggagcgacaggccatcctggggatccacaatgaagtctcaaagattgtccag
acctaccatgtcaacatggcaggaactaatccctacactaccatcaccccacaggaaatc
aatggcaaatgggaccacgtgcggcagttagttccccgaagggatcaagccctgatggag
gagcatgcacgccagcaacaaaatgaacgactccgcaaacaatttggcgcacaggctaat
gttatcgggccctggatccaaaccaagatggaggagatcggccgcatttccatagagatg
catgggaccctggaggaccagctcagccacctgcggcagtatgagaagagcattgttaac
tacaaaccaaagattgaccagctggagggagaccaccagcagattcaggaagcactcatc
tttgacaataagcacaccaactataccatggagcatattcgagtgggctgggagcagttg
cttacaacaattgctagaaccatcaatgaagtggaaaatcaaattctgacccgtgatgcc
aaaggaatcagccaggagcagatgaatgaattccgggcctccttcaatcattttgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgcctcatcagcttgggttac
gatattggaaacgatgcacagaagaagactggcatgatggattgtgaagatttcagagcc
tgccttatctccatgggttacaatatgggagaagcagagtttgcccgcatcatgagcatt
gtagatcccaaccgcttaggagtagtgacattccaggccttcattgacttcatgtcccgg
gaaacagcagatactgatactgctgaccaggtcatggcgtccttcaagatcctggctgga
gataagaattacatcactgtggatgaattacgacgggaactgcctcctgatcaggctgaa
tattgcattgctaggatggcaccatatagtgggcctgatgctgtacctggggccctggac
tatatgtccttctccacagcgctgtatggcgaaagtgacctttaa
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