Pelodiscus sinensis (Chinese soft-shelled turtle): 102453824
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Entry
102453824 CDS
T02980
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-3-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04145
Phagosome
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102453824
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102453824
09144 Cellular community - eukaryotes
04510 Focal adhesion
102453824
09142 Cell motility
04820 Cytoskeleton in muscle cells
102453824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102453824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102453824
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102453824
Membrane trafficking [BR:
pss04131
]
Endocytosis
Phagocytosis
Opsonins
102453824
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102453824
Exosomal proteins of colorectal cancer cells
102453824
Exosomal proteins of bladder cancer cells
102453824
Glycosaminoglycan binding proteins [BR:
pss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102453824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102453824
NCBI-ProteinID:
XP_025039330
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAGREQPGSEVLSVLDLLTVTEASHMASVAEKIRTQLLAVDDVYLLSTFRLPPKQGGLLF
GLYSKRDNTRWLEASVIGKTSKVLVRYTRGDGKVHSVSLQHAGVADGRSHTVIVRLGRLR
XXXXXXXXXXXXXLAVLPQAEVDGVELRTGQKAYQRMQGFVESMKLILGGSMSRVGALSE
CPFQGDESIQNAGNFSTRRMGCTRIRHAPDMGTACMHTHMLCTQHRHHADAHGLHMHMSC
TQHGHCADAYRLHTHMACTCDGALGSPVSCTPKWHKQCDDDADGDSIKNVEDNCRLFPNK
DQQNSDTDSFGDACDNCPNVPNNDQRDTDGGGASVLLVFCVIPQYLQPFLRKRVAALGVC
HILRGWCGRCAFSVPTRGLSRDWACATFSGDGVGDVCEEDFDNDTVVDQLDVCPESAEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
VNTITDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQANPFRAVAEPGIQLKAVKSRTGPG
EYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEMVA
DSGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNGELFPVLTPGGEGGGLASCSHPQEC
CCQSCQEHNSLVTHAESKQHNVYFILKIPRPAGWEGKI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgggagcagcccgggtcagaggtgctgtcagtcctggacctgctgacggtg
accgaggcctcgcacatggccagcgtggcagagaagatccggacccagctcctggctgtg
gacgacgtttacctcctgtccaccttccgcctgccccccaagcagggcgggctgctcttc
ggcctgtactccaagagggacaacaccaggtggctggaggcctcggtcattgggaaaacc
agcaaagtgctggtgcgctacacgcggggggacggcaaggtgcactcggtcagcctgcag
cacgccggcgtggcggacgggcgcagccacacggtgatcgtgcggctggggcgcctgcgc
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctggccgtcctgccccaggcc
gaggtggacggggtcgagttgcgcaccgggcagaaggcctatcagcgcatgcagggcttt
gtggagtcaatgaagctgattctaggagggtccatgagccgagttggggccctgagtgag
tgtcccttccaaggggatgaatccatccagaacgcaggtaacttcagcacgcgccgtatg
ggctgcacacgcatacgtcatgcacccgacatgggtactgcatgcatgcacacacatatg
ttgtgtacccaacacaggcaccatgcagatgcacatgggctgcacatgcatatgtcatgc
acccaacatgggcactgcgcggatgcatataggctgcacacacatatggcatgcacctgt
gacggcgcgttggggtcccccgtctcctgcaccccgaaatggcacaaacagtgtgacgac
gacgcggacggggacagcatcaagaacgtggaggacaactgccgactcttccccaacaaa
gaccagcagaactcagacacggactccttcggggacgcctgtgacaactgccccaacgta
cccaacaacgaccagcgggacacggacgggggcggggccagtgtgctcctggtcttctgc
gtcatccctcagtacctgcagcccttcctgcgcaagagagtcgcggctctgggcgtgtgc
catattctcaggggatggtgtgggcgctgtgcattctctgttccgacccgtggcctgtcc
cgtgactgggcgtgtgccacgttctcaggggatggcgtgggcgacgtgtgtgaggaggat
tttgacaacgatacggtggtggaccagctggacgtgtgcccggagagcgccgaggtgacg
ctgaccgacttccgggcctatcagaccgtcatcctggaccccgaaggggacgcgcagatt
gaccccaactgggtggttctcaatcagggcatggagattgtgcagaccatgaacagtgac
ccaggcctggctgtaggctacacggccttcaacggggtggacttcgagggcaccttccac
gtgaacaccatcacggacgacgactacgccggctttatcttcggctaccaggacagctcc
agtttctacgtggtgatgtggaagcagacggagcagacgtactggcaggcaaaccccttc
cgagcagtggcagagcctgggattcagctgaaggcagtgaaatctagaacagggccagga
gagtatctccgcaattccctttggcacacgggagacacgaccgaccaggtcaagctgctg
tggaaagaccccaggaattctggctggaaggacaagacctcgtatcgttggttcctccag
caccggcctcaagttggatacatcagagctcgcttctacgaaggccctgaaatggtagca
gactccggagtcgtccttgatacaaccatgcgggggggtcgtctgggagtcttctgcttc
tcccaggagaacattatctggtccaatctgcggtaccgctgcaatggtgagttgttccct
gtgctgacgcctggcggagaagggggaggactagcctcctgctcccatccacaggaatgt
tgctgccagtcgtgccaggaacacaacagccttgtcacccacgcagagagtaagcaacac
aatgtgtattttatcctaaaaatacctcggccagcgggctgggaaggcaaaatctaa
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integrated database retrieval system
