Pelodiscus sinensis (Chinese soft-shelled turtle): 102454221
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Entry
102454221 CDS
T02980
Symbol
AFDN
Name
(RefSeq) afadin isoform X10
KO
K05702
afadin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04517
IgSF CAM signaling
pss04520
Adherens junction
pss04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102454221 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102454221 (AFDN)
04530 Tight junction
102454221 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
RA_3
RA_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
102454221
NCBI-ProteinID:
XP_006122986
Ensembl:
ENSPSIG00000003100
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKRREKEALRQASDRDDRPFHGDDIENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDDKSAKEIILDDDECPLQIFREWSSDKGILVF
QLKRRPPDYIPKKSKKQTDGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYY
NYHTFEDGSDSRDKPKLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSIDAETYVEGQRISETTMLQSGMKVQFGSSHVFKFVDPSQDHIIPKRTLDGGLMIKG
PRHKTGVVQETTFDLEGDVHSGTALPASKSINRLDGDRTPSASSTAERGMVKPMIRVEQQ
QDYRRQDGRSQEVGPELVLPASIEFKESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTC
RYVLSNQYRPDISPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFI
KQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPDENNLQRPKIDDV
LHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQ
LGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSHDDIPNINSTCFKLNSLQLQALL
QNYHCAPDEPFIPTELIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSC
DVVRNIPNGLQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLLRENAELAQPLR
KEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVD
GRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGLGKP
RPKSEGFELYNNSAQNGSPESPQLPWAEYNEPKKLSGDDRLTKNRADHRSSPNVANQPPS
PGGKNAYAAGTTNKITSVSTGNLCTEEQTLPQRPEAYPIPTQTYTREYFTFPASKSQDRM
GPAQNQWPNYEDKPQIQAESNHSISAAMQRAAHSQEELRDDKVFQPERNRLEVVIRKDIE
YVDRKSDSDPWMNSSVDSSTSSQEHLNHSSKPVSPGSCLTKSGPGRWKTPAISQPTPVAA
SQPIRTDLPPPPPPPPVHYAADFDGLQMDLSLPLPPPPPPNQLGTQLSSQVAAAERKKRE
EHQRWYEKEKARLEEERERKRREQERKLGQMRTQPLIPAQPMVPPVSVQQLKLEKPATLQ
RSQDTVIRELQPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMH
IVDMLSKEIQELQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTM
LIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKREAEEKRRQE
EEYYNRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPPPPPPSNAPPPPPQRNTS
YLKTQVLSPDTVYTAKFVAYNDDDEEDSTLAGPNSYTGSTGAIVGAHEVYRDPREKRSKS
QDTDLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagacaaagcagctggaaactttgcaacaaaatgtattcgtgtt
tctagtactgccacaacgcaagatgtaatagaaacccttgcagagaaattccgaccagac
atgcggatgttgtcatctcctaaatactcactttatgaggtgcacgtcagtggagaagaa
agaagattagatatagatgagaagcctcttgttgtacaattaaattggaacaaagatgac
cgagaagggaggtttgttctcaagaatgaaaatgatgctcttcctccaaagaaggctcag
agcaatgggcctgaaaaacaagaaaaagagggtgtgatccagaacttcaaacggactcta
tctaagaaagaaaaaaaagaaaagaagaggcgagagaaagaggcattgcgacaagcatca
gatagagatgatagaccttttcatggagatgatattgagaattctcgacttgcagcagag
gtgtacaaagatatgccagagaccagcttcactcgcacaatatccaatcctgaagtagtc
atgaaacgaaggcgacagcagaagctagagaaaagaatgcaggaatttcgcagctctgat
ggccgtccagactcaggtgggaccttgaggatttatgcagacagtttaaaaccaaatata
ccatataagaccatcctgctgtccactacggatactgcagactttgcagttattgaagca
ctggagaagtatggtctggaaaaggagaatcccaaggattactgtattgctcgggttatg
cttcctcctggtgctcagcactctgatgataaaagtgctaaagaaattatacttgatgat
gatgagtgcccacttcaaattttcagggaatggtctagtgataaaggaatactagtcttt
caattaaaaagacgacctcctgactatatcccaaagaaatccaagaaacaaactgatgga
aagccattaaaggggaaggaaagagttgacgggtctggctatggctcttgccttcctcct
gagaaactaccttacctggtggaattaagcccagggagaaggaatcactttgcctactac
aactatcacacttttgaagatggttctgactccagagataagccaaaactgtatcgacta
caactgagtgtcactgaagttggaacagaaaaatttgatgacaattccatccagttgttt
ggaccaggaattcagcctcatcattgtgacctcaccaatatggatggagttgttaccgtt
acaccaagaagcattgacgctgagacttatgtagaaggtcagcgtatttcagagaccaca
atgctgcaaagtggtatgaaggttcagtttggatcatctcatgtatttaaatttgtggat
cccagtcaggaccacatcattcctaaaagaactctagatggaggtctgatgatcaaaggg
ccaaggcacaaaactggggttgttcaagaaacaacatttgatctggagggagatgttcac
agtggaacagcattaccagcaagcaagagcatcaacagactggatggtgacagaactcca
tcagcatccagtacagctgaacgaggaatggtgaagccaatgattagagtggaacagcag
caagattatcgcaggcaggatggcagatctcaggaagttgggccagaactcgtattacct
gcaagcatcgaattcaaggaaagctctgaagatgccttcttatctgccattattaattat
accaacagctcaactgttcattttaaattatcacctacttatgttttgtacatgacatgt
cggtatgtattgtcaaaccagtacagacctgacatcagtcctactgagcgtactcacaaa
gtcattgcaatagtcaacaagatggtgagcatgatggaaggagttatacagaagcagaag
aatattgctggggcacttgccttttggatggcaaatgcatctgaattgctcaacttcatt
aaacaagaccgcgaccttagccgaattactttagatgcgcaggacgttttggcacatttg
gttcaaatggctttcaaatatttagttcactgtcttcagtcagagcttaacaattacatg
ccagcattccttgatgatccagatgaaaataatcttcaaagacctaaaatagatgatgtc
ttgcatacactaactggagctatgtccctgttgcgacgatgtagagtgaatgctgcactg
actatacagctcttctcccagctctttcactttatcaacatgtggctttttaatagattg
gttactgacccagattcaggattgtgttcacattattggggagccatcatccgtcagcag
ttgggccatatcgaggcatgggcagaaaaacagggtctagaattggctgctgattgccac
ttaagcaggatagtgcaggcaactacactacttaccatggataagtattcacatgatgac
attccaaatattaacagtacctgctttaagttgaactctctacaactacaggcattattg
cagaattatcactgtgctccagatgaaccatttatcccaacagagttgatagagaacgta
gtggctgttgcagaaaacacagctgatgaactagctcgtagtgatggcagagaagtccag
ctagaagaggatcctgatctacaactgccttttcttttgccagaagatggctattcatgt
gatgttgtcagaaatattccaaatggtttacaagaatttttagatccactatgccagaga
ggcttttgcagactgacacctcatccacgttcaccaggcacttggacaatatattttgaa
ggtgccgactatgaaagtcacctgttacgtgagaatgccgaactagctcagcctttgagg
aaagaacctgaaatcatcacagtaacattaaagaaacaaaatggaatgggcctaagcatt
gttgctgctaagggtgcaggacaagataaacttggaatctatgtcaaatctgttgtaaaa
ggaggtgcggcagatgtggatggtcggctagctgcaggggatcagttgctcagcgtggat
ggtcgaagcttagtgggtctgtcccaagaaagggcagcagaactcatgacaagaacaggt
tctgtagtgaccctagaagtagcaaaacaaggagcaatttatcatggtctggcaacactg
cttaaccagccatccccaatgatgcaaagagtttcggatcgccgtggattaggtaaaccc
cgaccaaagagtgaaggttttgagctgtataataattccgctcagaatgggtcacctgag
agccctcagctgccttgggcagagtataatgaaccaaagaagctgtcaggggatgacaga
ctgacgaagaatcgagctgatcaccgctccagtcctaatgtagcaaatcagcctccaagc
cctggagggaaaaatgcttatgctgctggaactaccaacaagataacttcagtctctact
ggaaatctttgtacagaggagcagaccctgccacaaagacctgaagcttaccctatacca
acgcaaacctataccagagaatatttcacattcccagcttcaaaatcccaggatcgaatg
ggtccggctcagaatcagtggccaaattatgaagataaaccacagatccaggcagagagt
aatcactctattagtgctgcaatgcagcgtgcagctcattcccaggaagaactgcgagat
gataaagttttccaaccagaaaggaatcgtctggaggtggttataagaaaggatatagag
tatgttgatcgaaagtcagatagtgatccatggatgaattcatctgtagattcaagcaca
tccagccaagagcatctgaaccattcctccaaaccagtttcccctggttcttgtttaacc
aaaagtggacctggccgttggaaaactccagctatcagtcagccaacaccagtggcagct
tcccagcccatcagaacagaccttcctcctccaccacctccaccaccagtacattatgca
gctgattttgatggactgcaaatggatttgtctttgcctcttccacctcctccccctcca
aaccagctaggaacacaattatcttcacaggtagcggctgcagaacgtaaaaagagagag
gagcatcagcggtggtatgaaaaggagaaagcacgtctagaggaagagcgagagaggaag
cgtcgtgagcaggaaaggaaattgggccagatgcgtactcagccactaattcctgctcag
cctatggttcctcctgtttctgtgcagcagctgaaactagaaaagcctgcaacattgcag
aggtcccaggacacagtcattcgagagctacagccacaacagcaaccccgaaccattgaa
cgaagagatctgcagtacatcaccattagcaaagaagaactgtcctctagtgatagcttg
tctcctgatccctggaaacgggatgctaaggagaagctagagaaacaacaacagatgcac
attgtggacatgctgagtaaagagattcaggaacttcaaaacaagcctgatcgtacagcc
gaagagaacgaccgcctgcgcaagcttatgctcgagtggcagttccaaaaaagactccaa
gagtcaaagcaaaaagatgaggatgatgacgaggaagaagatgatgatgtggataccatg
ctcatcatgcaacggctggaggctgaaagaagagcaagggatgaagagcgcagacggcag
caacagttagaagagatgcgtaaacgagaagcagaagacagggccaggcaagaagaagag
cgccgacgccaggaggaggagcggaccaagagagaggctgaagaaaagaggcgacaggag
gaggaatattacaaccgtttagaagctgaaaggcgtagacagcatgatgaggcagaacga
agattactggaacctgacgagcctggtctgtacagacctccgcttccacgggaatatgag
ctcccacccccaccccccccatctaatgctcctcctcccccacctcagcgaaacacctct
tacctcaaaacacaggtcctctcccctgatacggtttatactgccaagtttgttgcatac
aatgatgatgatgaggaggattccactctagcaggaccaaattcttacactggatctaca
ggagcaattgttggagcccatgaagtttatcgggatccaagagaaaaaagatctaaaagt
caagatacagatctacctggagcaccagagaatttgacatttagggaacgtcaacgactt
ttttcccagggccaggatgtatccaataaagtaaaggcttctaggaaattaatggaactg
gaaaatgagttgaacacaaaataa
DBGET
integrated database retrieval system
