Pelodiscus sinensis (Chinese soft-shelled turtle): 102454329
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Entry
102454329 CDS
T02980
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102454329 (HELZ)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102454329 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102454329 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
102454329
NCBI-ProteinID:
XP_006110643
Ensembl:
ENSPSIG00000005225
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHFLDACQAEIDRIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGSFHAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKMLLAETETAASKVPSRYHGEDLEDGSQDGWQFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLI
EKWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSQQTWTFALTCKPARMLYRVALLY
DAHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMAQNGIDHYIYKVSIAFNTEIFGT
FRQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVDFEPNE
TTELEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNI
KVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVT
KEKSVQTQGTKEKVYEAAIEEKTKDYIFLRISRECCEELNLRADCEMQVELQFQLNRLPL
CEMHYALDRIKDNSILFPDVRMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILRQRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSDLFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSANTNKQQQSPPKGKGHHHNQND
HFPTDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAV
YGGNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSP
VSIGQQQLQHQEKEQHEQNRNGKTENSAGPEINKIRTPEKKHVDSKQVDVEGNSQNRSPE
SRSSIGYPNSKFHRKDNLNPRQLNLHLTPPHPQYAVPSRHFQHLSQIPRQPYPVQPQQNL
LSQQQNHLPEQQNQIPPQQSQVVHQHNHVNQQPPQPSQLSPAYQMGPNQSFFNNPVPHRP
HSPAVDAVISEHHPPPMLQEVSNPLRPIAQHNPMLPSHLNNFIEESPAGLPIGETLDRMH
GNVALETLRQQQARLQQWNEHNAYLSQGNIPYPHHHHPHLPHLPQQPIGLHQQPIRANWK
LASNAEDETEATYSRFQDLLRELSHRDQNESRDLSEMPPPQSRLLQYRQVQPRSPPALPS
PSCNSNHSSHFPNFIENNRDIEISNNPAFQQHLPQIYNPPFSMQSEHIPPPPLKYLQPDG
SWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIPNHQHAVGQEPFHPLTSRAVSASS
LHSLEEYEPRGPGRPLYQRRISSSSVQACSEDFNTPPDNLGQCKELQDHSNQSSFNYSSP
ELWVNSTSSAPYQNIPCNGSNRAVPPRELLAPPKTVKPPEDHLKAENIQLSNSFNYNMLQ
HLGQFPPLMPNKQIVESNSNSQQNAGGNKPTMSYASALRAPPKPKPPPEQAKKNSDPLSL
FQELSLGSSSGSNGFYSYFK
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcacttaaacagcag
gattatgaagtggctgtgaagcactgcacggaggcgctcctttccctcagccagtacccc
ccagctcactttctggatgcatgccaggctgaaattgaccgcatcaaaattgagagtctt
ctctatagaattgcttcttttttacaacttaaaaactatgggcaagcagatgaagactgt
aggcatgtgctgggagagggactggccaagggagatggctctttccatgcagtgctttgc
tgtatgcatcttaaagggaagctgcaaattgtatctaatgttctttccaaatcactgatg
ggcgaatcattgaatgggatggtaactaaggatttgacaagactaaaaatgcttcttgct
gaaacggagacagcagcgagtaaagtaccctcacgataccatggggaggatttggaagat
ggatctcaggatggttggcaatttcgccctccacccaggggagtcacaagtagcgaggag
tacacattgtgtaaaagatttttagagcaaggaatctgcaggtatggtgcacagtgtact
tcagcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgata
agattaaaacaacaaaaggaaaacaaacaatgttcgggtagttatatggaaactttgatt
gagaaatggatgaattcattatctcctgaaaaagtgcttagtgaatgcgtggaaggagtg
agagtagagcataatcctgaattatcggttactgttaccaccaaaaaatctcaacaaaca
tggacatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttat
gatgcccatcgtcctcatttcagtatcgttgcaatatctgctggagacagcactacccag
gtatcacaagaagtcccagaaaactgtcaggaatggataggaggaaagatggcccaaaat
ggaatagatcattacatatacaaagtcagtatagcctttaacacggaaatctttggaaca
tttcgccaaactgtagtgtttgattttgggttggaaccagtactcatgcaacgagtaatg
attgatgctgcttcaacagaagatcttgaatacctgatgcatgcgcggcaacagttacta
actacagctaagcgttgggattctacttctaagactattgttgattttgagcctaatgaa
actactgaattggagaagagccttcttataagataccaaattcctctatctgctgaccag
ctgtttacacagtctgtcctggacaaatcattgaccaagaccaactatcagtcacggttg
catgacctcctttatattgaggaaatagcacagtataaggaagtcagcaagttcaacata
aaagtgcaattgcagattgtagcaagcttcatgcttactggtgtttctggaggggcaaag
tatgcccaaaatggacaactttttggccgctttaagctcactgaaacgctttctgaagac
accttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgccagtcact
aaagagaagtcagtacagacccaaggaaccaaagagaaggtttatgaagcagctattgaa
gagaaaacaaaggattatatcttcttgaggatatccagggaatgctgtgaagaacttaat
cttcgagcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctc
tgtgaaatgcattatgccttggacaggatcaaggacaacagtattttgtttcccgatgtc
cgcatgactcccaccataccctggagccccaacagacaatgggatgagcagttggaccct
cgattaaatgcaaagcagaaagaggctgttctggctataacaactccactttcgatacaa
ctgcctcctgttcttatcatcggtccctatgggacaggcaaaacattcactctggctcag
gcagtcaagcacatactccaacagcaagatactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcgagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcaatactgtttgatttcaagcacacattccacctttcagatgccacagaaa
gaagatatccttagacaacgagtagtagttgtgactttgaatacttcacagtatctatgt
caactggatcttgaacctgggttttttacgcatattctgttagatgaagctgcacaggcc
atggagtgtgagacgatcatgcctctagcattagctaataaaaacacaagaatcgtcttg
gctggagaccatatgcaactcagtccttttgtctacagcgaatttgccagggagagaaat
cttcatgtttcattacttgatcggctctatgagcactaccctgcagaatttccatgcagg
atcttgctgtgtgagaattatcgctcccatgaagctatcatcaattacacatctgacctt
ttctacgagggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccct
ttgacattctttacagcacgtggagaagatgtgcaggagaaaaacagtacagctttctac
aacaatgcagaggtatttgaagtagtggaacgtgttgaagaattgagaagaaaatggcca
gtagcttggggaaagttggatgatggcagtataggggttgtaacaccatacgctgatcaa
gtgttccgaattcgggcagaacttcggaaaaaaagattatctgatgtcagtgtagaaaga
gtgctaaatgttcagggaaagcagtttagagttctgtttctcagcacagtgcgaacacgg
catacgtgcaaacacaagcaaacgccgatcaaaaggaaggagcaattgctggaggattca
acagaggatttggattatggttttctgtccaattacaaacttctaaacactgccattaca
agagcacagtccctggtagctgtggtgggagacccaattgctttatgttccattggaaga
tgcaggaaattttgggagcgatttattgctctgtgtcatgagaatgagagcctccatggt
atcacatttgaacagatcaaggctcagttggaggctttggagttaaagaaaacctacgtt
ttgaatcccctggcaccagagtttatccctcgggctctgcgacagcagcattcagcaaat
accaacaaacagcaacaatcaccacccaagggcaagggccatcatcataatcagaatgac
cattttccaactgatggaattgttcagcccaatccttctgtcctaattggaaatcctatc
agagcatatactcctccccctcctcctcttggacctcaccccaacctggggaaatcacca
agtcctgttcaaaggatagatcctcacactgggacaagtattctttatgtacctgcagtc
tatggaggaaatatggtcatgtctgtgcctttgcctgtaccatggacagggtatcagggt
aggtttgcagttgaccctcgactcattacacaccaagcagctatggcatataatatgaac
ctgttacaggcacatgggcgtggatctcctataccttatggcctgggacatcattcacca
gttagtatagggcagcagcaacttcagcatcaggaaaaggagcaacatgaacaaaataga
aatggtaaaaccgaaaacagtgctggacccgaaattaataaaattcggacacctgagaaa
aaacacgtggactccaaacaggttgacgtagaaggaaattcccagaatagaagcccagag
tcacgttccagcattggttatcctaattctaaatttcatcgcaaagataatctcaaccct
aggcagctgaatctacatctcaccccaccccacccacagtatgcagtccctagtcgccac
ttccagcacctgtcccagatcccaaggcagccgtaccctgtgcaaccacagcaaaatctt
ttaagtcagcaacaaaatcatttgcctgaacagcaaaaccaaataccacctcagcagagc
caggtagtccatcagcataatcatgtaaatcagcagcctccacaaccttcacagctttcc
cccgcttaccagatgggccccaaccagtctttttttaataacccagttcctcatcgacca
cattctcctgcagtagatgctgtgatttcagaacatcatcccccacccatgttgcaagaa
gtcagtaaccctttgagacctattgcacaacacaacccaatgttgccatctcacttgaac
aacttcattgaagagagtcctgcgggattgcccataggagagacattagatcgtatgcat
ggaaatgtagctttggaaacattaaggcagcagcaagcaaggttacagcaatggaatgag
cataatgcctatctcagtcagggcaatattccatatccacaccatcaccatcctcaccta
ccacatcttccccagcaaccaattggattgcaccaacagcctattagggcaaactggaaa
cttgccagtaacgcagaagatgaaacagaggcaacatattcaaggttccaggacttgctc
agagaactgtcacaccgtgatcaaaatgaaagtagggacctaagtgaaatgccacctccc
caatccaggttgttgcaatacagacaagttcagcccagaagcccaccagcacttccttct
ccttcctgcaactcaaaccacagcagccactttcctaacttcattgaaaacaacagagac
attgaaatctccaacaatccagcatttcagcagcatttgccccaaatatacaatccccct
ttctcaatgcaatctgaacacatacccccacctcctttgaagtacctgcaacctgatgga
tcatggacctatgctaacctacagcagaatcacctaatggggcagggctttcattatggt
atacctccattgccccatagatcacaacagaacccttttatacaaataccgaatcatcag
catgcagttggtcaggagccatttcatccgctcacatctcgagcagtatctgcttcttcg
ctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaaga
atttcctctagttcagtccaggcgtgttctgaagattttaacactcctccagataatctt
ggtcagtgtaaagagcttcaggaccatagtaaccagtcttctttcaactattcatcacct
gagttgtgggtaaactccacctcatctgccccatatcagaacattccatgcaatggatcc
aacagagcagtaccacccagagaactgttagctccaccgaagacagtcaaacccccagag
gatcacctgaaagctgaaaacatacagctgtccaattccttcaactacaacatgctgcag
catctcggccagttcccacccctcatgcccaataagcagatcgttgaatccaacagcaac
agccagcagaatgctggtgggaacaagcctaccatgtcctacgcaagtgctctgcgggct
ccaccaaagcccaaacctcctcctgagcaggcaaaaaagaatagtgaccctttgtctttg
tttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctattttaaa
taa
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integrated database retrieval system
