Pelodiscus sinensis (Chinese soft-shelled turtle): 102454411
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Entry
102454411 CDS
T02980
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102454411 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102454411 (EXOSC1)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102454411 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102454411 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
PUA
Motif
Other DBs
NCBI-GeneID:
102454411
NCBI-ProteinID:
XP_014433887
Ensembl:
ENSPSIG00000013571
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MTKHVTEACRDECLAGLGRAWWTWYADTGSVGVGGGRARHRANQGLLSTPAQLPVVSVVR
DVESQLLPNVGAIVTCKVCSINSRFAKVRILYIGSTPLKSTFRGTIRREDSTRSVGCCLL
VSAQRLAATLFPAHAVEVYKSFRPGDIVLAKVISLGDMQSNYLLSTAENELGVVVAHSEA
VAQMVPISWCEMQCPKTHSKELRKVARVQPEFLQT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacacgtaactgaagcatgcagggacgagtgcttggccgggctgggccgggcc
tggtggacgtggtatgccgacactggctctgtgggggtgggaggtggccgtgccaggcac
agggctaaccaagggctcctctctacgcctgcgcagctgccggtggtgtctgtggtgaga
gacgtcgagtcccagctcctgcccaacgtgggggccattgtgacgtgcaaggtgtgcagc
attaactcccgctttgccaaggtgcgcatcctctacatcggctccacgccgctgaaatcc
accttccgaggtaccatacggagagaagacagtacaaggtcagtcggctgctgcctgctt
gtttctgcccagcgcttggctgccaccctcttccctgcacatgcggtggaagtttacaag
agtttccgtcctggggacatagtcctggctaaagtgatctccctgggggacatgcagtcc
aactacctgctgagcactgctgagaatgagctgggcgtggtagtggctcacagcgaagca
gtggcacagatggtgccaatcagctggtgcgagatgcagtgccccaagactcactccaag
gagctccgcaaggtggcccgtgtgcagccggagttcctgcagacctag
DBGET
integrated database retrieval system
