Pelodiscus sinensis (Chinese soft-shelled turtle): 102454681
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Entry
102454681 CDS
T02980
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102454681 (CASC3)
03015 mRNA surveillance pathway
102454681 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102454681 (CASC3)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102454681 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102454681
NCBI-ProteinID:
XP_014424589
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MFLFCFQESEDGIEGDAVLSDYESAEDSELDVCLQAEEGEYSEEESAKVELKQESSNATE
STGKAEKGEEKPAPKGSVTGERQSGDGQESTEPIENKVGKKVPKHLDDDEDRKNPAYIPR
KGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDI
RSAHNPDDIKPRRMRKPRFGSPPQREVNWANERQAKPPRHESSDSASLPTRTFTSRNAAG
TGRMPPARNFPRMGGYKENRPSYRAVEANSQHLSRAGEQAKHDSSTRARRVEEAPERDPS
PEAEMAPVHSSPAKKEELVLESQTPSTDSAQPPPDRPIEKKSYSRVRRTRVKAGDAGKLA
DEVPPPEGSAPVPPKPVQVASPPPPAKAGSWESPVEASLDGLEQDMTQLNLTEQTWTPGQ
PPFIQPRELRGIPNHMHMGAGPPPPFNRMEDMGVQAGRAKRYSSQRQRPPVPEPAPPMHI
SIMEGHYYDPLQFQGPIYTHSETPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLANPGLY
PPPVSMPPGQPPPQQLLTPTYFSPPGVMNFGSPGYPYPPGALPPPPPPHLYSNTQAQSQV
YGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRAPVNLSF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttcctattctgctttcaggaaagtgaagatggcatcgaaggagacgctgtgctctcg
gattacgaaagtgcagaagactccgagttggatgtttgcttgcaggccgaggagggggag
tacagcgaggaggaaagcgccaaggtggagctgaagcaggagagcagcaatgccactgaa
tccacaggaaaagcagagaaaggggaagagaaacctgcccccaaaggttctgtgacgggc
gagagacagagcggggatgggcaggagagcactgaaccaattgagaataaagtggggaaa
aaggtccccaagcacttggatgacgacgaggaccggaagaaccctgcttacataccccgc
aaagggctcttctttgaacatgatctccgcgggcagacccaggaggaggaagtcaggcca
aaggggcgccagcgaaagctctggaaggatgagggccgctgggagcatgacaaattccgg
gaagatgagcaagcccccaaaagcaggcaggagctgatcgccctctacggctatgacatc
agatcggctcacaatcccgacgacatcaagcccaggaggatgcgcaagccccggtttggg
agccccccgcagcgcgaggtgaactgggccaacgagaggcaagccaagccgccgagacac
gagagctcagacagtgcttcgctgccaacacggaccttcaccagccgcaacgcagcaggc
accgggaggatgcccccagccaggaactttccaaggatgggtggctacaaagagaaccgg
ccaagctaccgagctgtggaagcaaacagccagcacctctctcgagcaggggagcaggct
aagcacgacagcagtacccgggcgaggcgtgtggaagaagcccccgagagggacccctct
cctgaagcagagatggcccctgtccacagcagccctgccaagaaggaagagctggttttg
gaaagccagacccccagcacggactctgcccagccgccaccagacagacccattgaaaag
aaatcctactccagggtgaggagaactagggttaaagccggcgatgcagggaagctggcc
gatgaagtgccccctccagaagggtcggcgcccgtgcctccgaaaccggtacaggtcgcg
agcccccctcctcctgcaaaggctgggagttgggagtcgccagtggaagccagcctggat
ggattggagcaagacatgactcagctgaatctaaccgagcagacctggaccccgggacag
cctccgttcatacagcctcgggagcttcgaggtattcctaatcatatgcacatgggagct
ggaccaccacccccgtttaacaggatggaggacatgggagtacaggcgggccgtgccaag
cgttactcatcccagcgccagcggccgccagttccggagcctgctcccccaatgcacatc
agcatcatggaagggcactattacgatccattacaattccaaggaccaatctacacccac
agtgagactcctgccccgttacccccccagggtatgattgtgcagccggaaatgcacctc
ccacatccaggtttacatccacaccagacgccagcacctttggctaaccctggcttatat
cctccaccggtctccatgccgcctgggcaaccgcccccacagcagctgctcacgcccacc
tatttctcccctcctggagtcatgaattttggcagccccggctacccctacccccctgga
gcacttccacccccaccccctccccatctctattccaatacacaggcccagtcccaggtg
tacggcggggtcacctactacaacactgtccagcagcaagtgcagccgaaaccttctccg
ccccgaagaacatcccagcctgtgactatcaagccaccgccccccgaggttgtaagcagg
gctccagttaatttgagtttctaa
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