Pelodiscus sinensis (Chinese soft-shelled turtle): 102454780
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Entry
102454780 CDS
T02980
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
pss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102454780 (BRIP1)
03460 Fanconi anemia pathway
102454780 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102454780 (BRIP1)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102454780 (BRIP1)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102454780 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102454780 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
102454780
NCBI-ProteinID:
XP_025035065
Ensembl:
ENSPSIG00000018052
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MSSVASEYTIGGVKINFPCKAYPSQLAMMNSIVKGLNSRQHCLLESPTGSGKSLALLCSV
LSWQQSLHEKSLDEFSCEKECKKPEPSLPCHCRCHSQAVSNDTSADVNQGASCSFTDCKA
ATSIKSETVSTDKEHSGKVTLSSKLSAKKWASLHKDENDDFQVDRKRIRLLETEQQGIQC
LLLCVLLAFSNIFLVVAVLDDDPPHVCFKNTFTTDLTKQNRRYQCDIPKDIFSTRSIRKR
HCFAKGVKFVDALEVYQQRRNGELIVHSEKNSFSPKTSPGPCTQCSCSSAKENTKDVSNA
KRKENGGKPHIPKIFFGTRTHKQIAQITRELRRTVYSSVRMTILSSRDHTCVHPVVSSSS
NRNEKCVDLLEGKNGSSCVYYHGVHKLSEHHALQFARKKCQAWDIEDLVSLGKKLRACAY
FAARELMVGADIVFCPYNYLLDAQIRESMEINLKDQIVILDEAHNIEDCARESASYSVTE
TQLRFAREELDMMVINNIRRKDHDPLRAVCYSLTNWLKESSGQLKERGYETSCKVWSGKE
MLTILHNMGITNATFPILQKHFVAVLEKEENISKFLGGDEVIQVPIVSPATQIVLKGLFM
VLQYLFKDNNRFADDYRIALQQTYVWTNENQLDIPDKNSFFVQPKHKRSSRQKTAVHMLN
FWCLNPAVAFSDLSGSVRTIVLTSGTLSPMDSFSSELGVKFTIQLEANHVIHNSQVWVGT
IGAGPKGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGVLCFLPSYKLLDKLKDRWMH
TGLWRNLELVKTVIAEPKGGDKADFDALLQIYYDAIKYKGEKDGALLIAVCRGKVSEGLD
FSDDNARAVITIGIPFPNVKDLQVELKRKYNDQYSKTRGLLPGSQWYEIQAYRALNQALG
RCIRHKKDWGALMLVDDRFRSNPNKYITGLSKWIRQQMQHHENFNSALDSLDAFAKKNQV
DTGSSAQCNNESLLVHSSSKDLSSTSQWEASIHLSPDVPVESKVQSLVLEAHSPTAINTV
NSSASRQSSNIMATKKNDQTFSVESHSHQTAWREKHTDSKPRPVIKKERGKRNSWTNADL
MKQYFSNKPLTSTPLPVNEKKCISQAKCKQKRRTAESSQPVVNGPQCQSSLLTEHTPSRP
TLQLESTSSSITNGELAQCIELSPVKGKTELSMLNVAMEAEAEDDSIYFTPELYDDIESE
EQQIEPLMQTCNNTVNENEHGACIEISTSKVTSSVGEMKSSGNMCRELDIIMQNDKIKGN
AVSDAASITSVGEVEQKKYQEMDVRKKKSKLSRSRNKGLNEQRACKRRTKKATIRGNGFI
CERKEMHSQSQPCRSGLYCILCGAEILPKAEGNLKKAFCSNAELKIVQKLFRNTNVRASE
SVSNCMCELGTISEDDDVVLIITDGASISHLRETLKVYQTQMKYEDFDTDLALNAIWNVK
ERSLTSYLQCRNCVIRSISPCPLIGAEIIDLRRNTQSWNAAVGSLCLRIWQNLHLSEFSH
NIHQESYCILGLEYN
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtggcatcagaatataccattggtggggtgaagattaactttccttgcaag
gcttacccctcacagcttgctatgatgaattcaattgttaaagggctaaattccaggcaa
cattgtttgttggagagccccacaggaagtggtaaaagtttggcgttactatgttctgta
ttgtcatggcagcagtctcttcacgagaagtcactggatgagttctcatgtgaaaaggaa
tgcaaaaaaccagagccatctttgccatgtcactgtagatgccattcccaggcagtgtct
aatgacacttctgcagatgtgaaccaaggtgcctcttgttctttcactgattgtaaagca
gcaacttccataaaaagtgaaacagtctcaacagacaaagaacatagtggaaaagtcaca
ctgtcttcaaaattatctgcaaaaaaatgggcatctttacataaagatgaaaatgacgac
tttcaagtagacaggaaaaggatacgtttattagaaactgagcagcagggaattcaatgt
cttctgctgtgtgttctacttgcattctccaatatatttcttgttgtagcagtgctggat
gatgacccaccacatgtttgttttaagaacactttcactactgatttgacaaaacagaac
agaagataccagtgtgacattcctaaagatatcttcagcactagatccataagaaaacgt
cattgttttgcaaaaggagtgaagtttgttgatgctctagaagtttatcaacagcgaaga
aatggagaactgattgttcattcagaaaaaaattcattttctccaaaaacatctcctggc
ccctgcacacagtgttcctgttcttctgcaaaagaaaacactaaagatgttagtaatgca
aagaggaaggaaaatggaggaaagccacacatccccaaaatattttttggaacccgaaca
cacaagcaaatagctcagattactagagagctgcgaaggacagtgtactccagtgtccgt
atgacaattctttctagccgggatcatacctgcgttcatccagtggtttccagtagtagt
aacaggaacgaaaaatgtgtagacttgctggaaggaaaaaatggcagctcctgtgtttac
taccatggtgtccataaacttagtgaacatcatgctctacagttcgcacgtaagaagtgt
caggcttgggacatagaagatctggtgagcctgggaaagaagctacgtgcatgtgcctat
tttgcagctcgagaactcatggtgggggcagatattgtattttgtccttacaactacttg
ctggatgcacaaataagagagagtatggagattaacctaaaagaccaaatagtcatttta
gatgaagctcataacattgaagattgtgcacgagagtcagccagttacagtgttacagaa
actcagctgagatttgctcgagaagaacttgatatgatggtcatcaacaacattaggcgg
aaggatcatgatcccctgcgggcggtgtgctacagtctgacaaattggttaaaggaaagc
tctggtcagcttaaagaaaggggatatgagacatcctgtaaagtttggagtggaaaggaa
atgctcaccattttgcacaatatgggaataaccaatgctacatttcctattttacagaaa
cattttgttgctgtccttgaaaaagaagaaaatatttcgaaatttcttggaggagatgag
gttattcaggttcctattgtgagccctgctactcaaattgtgctaaaagggttattcatg
gttctgcagtatctcttcaaagataacaacagatttgcagatgactacagaattgctttg
caacaaacgtatgtttggacaaatgaaaaccaacttgatattccagataaaaattctttc
tttgtacaaccaaaacataaaaggagttcccggcagaaaactgcagtccatatgcttaac
ttttggtgcttgaatccagctgtggctttttcagacttgagtggcagtgtcaggacaatt
gttctaacatctggtacgctctctccaatggattcgttttcttcagaacttggtgtgaag
tttactatccaacttgaggcaaatcatgttattcataactcacaggtttgggttggcacc
attggggcaggccccaagggtcggaagctgtgtgccacattccagcatacagagaccttt
gaattccaggatgaagtgggagcacttttgctttcagtgtgtcaaactgttggccaagga
gtcttatgttttttgccttcttacaagttgttggataaattaaaagatcgctggatgcac
actggtttatggagaaacctggagctggttaaaacagtcattgcagagcctaaaggagga
gacaaagctgactttgatgcactgctgcagatatattatgacgcaataaaatataaagga
gaaaaagatggcgcacttctcatagcagtatgccggggtaaagttagtgaaggcttggat
ttttctgatgataatgcccgagctgttataactattggtattccatttccaaatgtaaaa
gatcttcaggttgagttaaagagaaaatacaacgaccagtactcaaagacaagaggcctt
ttaccaggtagccagtggtatgaaattcaagcttatagggctctcaaccaggcattgggc
cgatgtattcgtcacaaaaaggattggggtgcacttatgttagttgatgaccgcttcagg
agtaaccctaataaatacataacaggattatccaaatggattcgtcaacagatgcagcac
catgagaattttaattctgcacttgattccttggatgcattcgctaaaaaaaatcaggtg
gacactggttcttcagcccagtgcaataatgaatctctacttgtacattcaagttcaaag
gatctgtcatcaacttcacaatgggaggcatctattcatctgtcaccagatgttcctgtt
gaaagtaaggtacagagtttggtcctggaagctcattcgcctacagcaatcaacacagtt
aattcttcagcatcccgtcaatcaagtaacatcatggcaacaaagaaaaatgatcagact
ttcagtgtagaaagtcattctcaccaaacagcatggagagagaaacatacagattccaaa
ccaaggcctgtcatcaagaaagaaagggggaaaaggaatagttggactaatgctgacctt
atgaaacaatacttcagcaataagccattgacttcaacacctctgcctgtgaatgaaaag
aaatgcatctcccaagctaagtgcaaacaaaaaaggaggactgctgaatctagtcagcct
gttgtaaatggaccccagtgccagtcctcattgcttacagaacacacaccaagtagacca
acattacaactggaatcaactagctcctcaataacaaatggagaattagctcaatgcatt
gagttatctccagtaaaaggaaaaactgagctttcaatgttaaatgtagccatggaagca
gaagctgaggatgatagtatctattttacacccgaactgtatgatgatatagaatcggag
gagcagcaaattgaaccattaatgcaaacttgtaataatactgtgaatgagaatgaacat
ggagcttgcattgaaatcagtacttcaaaagtcacaagctcagttggagaaatgaaaagt
agtggtaacatgtgcagagagttagatattataatgcaaaatgacaaaattaagggtaac
gcagttagtgatgctgcaagtattactagtgtaggagaagtggaacagaaaaaatatcag
gaaatggatgtcagaaaaaagaaaagtaaactttccagatcacgaaacaaaggactgaat
gagcaaagagcatgcaaacgaagaacaaagaaagctactattaggggaaatggcttcatc
tgtgaaagaaaggaaatgcacagccagagccagccttgcagatcaggactgtattgtatt
ctctgtggagctgaaatattaccaaaagcagagggaaatttgaaaaaagctttctgcagt
aatgcagaattgaaaatagtccagaaactcttcagaaatacaaatgtaagggcttcagaa
tctgttagcaattgcatgtgtgaactgggtaccatttcagaagatgatgatgtggtgttg
atcatcacagatggcgcaagtattagtcatcttagagaaactttgaaggtttatcagacg
caaatgaagtatgaagactttgacacagatttagctttaaatgctatctggaatgtgaag
gaacgttctctgaccagctatttgcaatgcagaaactgtgtaatccggtctatttctccg
tgtcctttgataggagctgaaattattgatctcaggcgcaatacacagtcatggaatgct
gctgttgggagcttgtgtctcagaatctggcagaatcttcacttgtctgaatttagtcac
aacattcatcaggagtcttactgtattttgggccttgaatacaactga
DBGET
integrated database retrieval system
