Pelodiscus sinensis (Chinese soft-shelled turtle): 102455040
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Entry
102455040 CDS
T02980
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04142
Lysosome
pss04144
Endocytosis
pss05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102455040 (CLTC)
04142 Lysosome
102455040 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102455040 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102455040 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102455040 (CLTC)
Membrane trafficking [BR:
pss04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102455040 (CLTC)
Exosome [BR:
pss04147
]
Exosomal proteins
Proteins found in most exosomes
102455040 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
102455040
NCBI-ProteinID:
XP_025035066
Ensembl:
ENSPSIG00000008930
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MSPQPGVFTFACRPIISYFVLEHHTLDVQLQNLGINPANIGFSTLTMESDKFICIREKVG
EQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT
DDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL
LLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG
GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLY
DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNP
DLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVQ
AQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGD
LVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRIS
PDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLL
EMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHL
LNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESF
KSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKE
AKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCS
EDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYID
SNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSR
YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI
ELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELF
EEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAI
DSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAE
LEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGAR
KANSTRTWKEVNCPIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELA
ILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNH
PTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFFSK
VKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLEK
HELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQEE
KRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRK
EEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYTM
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcaacctggagtcttcacctttgcatgtagacctatcataagttactttgtt
ctggagcatcatacgctagatgttcagctccaaaatctggggatcaacccagctaacatt
ggcttcagtactctgactatggagtcagataaattcatctgcataagagagaaggtagga
gaacaagcacaggtggtgatcattgacatgaatgaccccagcaatcccattcggagacca
atttcagctgacagtgcaatcatgaatcctgctagcaaagtcattgcactaaaagctggg
aaaacacttcaaatctttaacattgagatgaagagtaaaatgaaggctcatactatgaca
gatgatgttaccttctggaaatggatttctctgaacacagttgctcttgtaactgacaat
gcagtctatcactggagcatggagggggaatctcagcctgtgaaaatgtttgaccgacac
tctagtcttgcaggctgccagatcatcaactatcgtacagatgctaagcagaaatggtta
cttctgactggcatatccgcacagcaaaatcgtgtggtgggagccatgcagctttattct
gtagataggaaggtgtctcagcctattgaagggcatgcagctagctttgctcaattcaag
atggaaggcaatgctgaagaatctactctcttctgttttgcagtaagaggtcaagctgga
ggcaagctgcatatcattgaagttggcacaccaccaacagggaaccagccgtttcccaag
aaagcagtggatgtcttttttcctcctgaagcccagaatgactttcctgtagcaatgcag
attagtgaaaagcatgatgtggtgtttctgatcacaaaatacggttacatccacttgtat
gatcttgaaactggcacctgtatctacatgaatagaatcagtggagaaactatatttgtc
actgcaccgcatgaagcaacagctggaattataggtgttaacagaaagggacaagtgctc
tcagtatgtgtggaggaagagaacataatcccttatatcactaatgtgctgcaaaatcct
gacctggctctgcgaatggcagttcgcaacaatctggcaggagctgaggaactctttgcc
cgaaaattcaatgcgctgtttgcccagggaaactactcggaggcagcaaaagtggcagca
aatgcaccaaagggaatcctgcgtaccccggacaccatacgccgatttcagagtgttcaa
gcacagcccggtcagacttctcccttgctccagtactttggaattcttctagatcaaggc
cagctgaacaaatatgaatccttggaactttgcaggccagtgcttcagcagggacgcaaa
cagcttctggagaaatggttaaaagaggataagctggagtgttcagaggaattaggagat
cttgtgaagtctgtggaccctacattggcacttagtgtctatctaagagctaatgtgcct
aacaaggtcattcaatgttttgctgaaacaggacaagtccagaagattgttttgtatgct
aagaaggttggatatactccagattggatcttcctgctaaggaatgtaatgcgaatcagc
cctgaccaaggacagcagtttgctcaaatgctagttcaggatgaagaacctctggcagat
atcacacaaattgtggatgtttttatggagtacaacctaattcagcagtgtactgctttc
ttgctggatgcactgaaaaataatcgcccttctgagggtcccctgcaaacacgtttactt
gagatgaacctcatgcatgcacctcaggttgcagatgctatcttgggaaaccagatgttt
actcattatgaccgggctcacattgcacagctgtgtgagaaagctggcctgctgcagaga
gcattagaacacttcactgacttgtatgatatcaagcgtgcagttgtccacactcatctt
ctcaatcctgagtggctggtgaattattttggctccttgtcagtagaagactctctggag
tgcctgcgtgccatgctttctgctaacattcgtcaaaaccttcagatctgtgttcaagta
gcttcaaaataccatgaacagctgtcaacccaatcgcttattgagctgtttgagtctttt
aagagctttgaaggtctattttatttcttgggctctattgtaaacttcagccaggaccca
gatgtgcacttcaaatatatccaagctgcatgcaagacagggcagattaaagaagtggaa
agaatctgcagagaaagcaattgctatgatccagaacgtgttaaaaacttcctcaaggaa
gcaaaactgactgaccagttaccactaatcattgtgtgtgatcgctttgactttgtccat
gatcttgtgctgtacttgtacagaaataacctccaaaaatatattgagatttatgtacaa
aaggtgaatccaagccgtctacctgttgtcattggaggattgcttgatgtggattgttct
gaagatgtgataaagaacttgatcctagttgtgagaggccagttttccactgatgagctt
gttgcagaagtagaaaaaagaaacaggctaaaactgcttcttccatggttagaagcaaga
attcatgagggttgtgaggagccagctactcataatgcactggctaaaatatacatagac
agcaacaacaacccagaaagatttctgcgtgagaatccctactatgacagtcgtgttgtg
ggaaagtactgtgagaagagagaccctcatttggcatgtgtggcttatgagcgtggccag
tgtgacttggagcttattaatgtatgcaatgaaaactcccttttcaagagcctctcgcgt
tacttagttcgccgtaaagatcctgaattgtgggggagtgtactgctggaaagcaatcct
tacagaagaccacttattgaccaggttgtgcagactgcactgtctgagacacaggaccct
gaagaagtatctgttactgtaaaagctttcatgactgctgatcttcccaatgagctcatt
gaactgttggagaaaatagttcttgataactctgtgttcagtgaacacaggaacctgcaa
aacctcctcattctcacagctattaaagcagaccgtactcgtgtcatggaatatatcaac
cgcctagataattatgatgctccagacattgcaaacattgctatcagtaacgaacttttt
gaggaggcttttgccatcttcaggaaatttgatgtcaacacctcagctgtgcaggtattg
attgagcacattggaaacctggatcgtgcatatgaatttgctgaacgctgcaatgagcct
gcggtgtggagtcagcttgccaaagctcagcttcagaaagggatggtaaaagaagcaatt
gactcctacattaaagcagatgatccttcctcctacatggaagttgttcaagctgccaat
gctagcggaaactgggaagagctggtgaagtacctacagatggcacgcaaaaaagcccgg
gagtcctatgtggaaacagaactcatttttgctcttgctaagacaaatcgtctagctgag
ctggaagaattcataaatggacctaataatgctcacatacagcaagttggtgatcgctgc
tacgatgagaagatgtacgatgctgctaagctgttgtataataatgtgtcaaactttggc
cgtttggcatccacattggttcacctaggtgaataccaggcagctgttgatggtgctagg
aaagcaaacagcactcgaacatggaaagaggtaaattgccccattgtagtgcatgcagac
gaattggaagagctcatcaactattaccaggatcgtggctactttgaggagctgatcact
atgttggaggctgcgctgggactggagcgtgcgcacatgggaatgtttacagagctagcc
attctctactcaaagttcaagccccagaagatgagggagcacctggaactcttctggtcc
agagtcaacattcccaaggtgttaagagctgcagaacaagcccatctctgggcagagctg
gtgttcttgtacgataaatatgaagagtacgataatgccataatcacaatgatgaaccac
ccaactgatgcatggaaagaaggacagttcaaagatatcatcaccaaggtggccaatgtg
gagctgtattacaaagcaatccagttttatttggaatttaaacccttgttgctcaatgat
ctgctgatggtgctttctccccggctggatcatactcgtgctgtaaacttcttcagtaag
gttaaacagcttccacttgttaaaccctacttgcgctcagttcaaaaccacaacaacaaa
tcagtgaatgagtctctgaataatctcttcattatagaagaagactatcaggctcttagg
acatccatagatgcctatgacaactttgacaacatttcccttgctcagcgcttagagaag
catgagctaattgaattcagaagaattgctgcatatctctttaaaggcaacaatcgctgg
aaacaaagtgtcgaactctgcaagaaagacagactgtataaggatgcaatgcaatatgcg
tcagaatccaaagatacagagttggcagaagaattgctgcagtggttcttgcaggaagaa
aaaagagaatgttttggagcttgtctcttcacctgttatgaccttctaaggccagatgtt
gtcttagaaactgcatggaggcacaacatcatggactttgccatgccctactttattcag
gtcatgaaggagtacttgaccaaggtggataaactggatgcctcagagtcactgagaaag
gaagaggaacaagctacagaaacacaaccaattgtttatggtcagccacagctaatgttg
acagcaggacccagtgttgcagttcccccacaagcaccttttggctatggctacaccgca
cctccatatgggcaacctcagcctggcttcgggtacaccatgtaa
DBGET
integrated database retrieval system
