Pelodiscus sinensis (Chinese soft-shelled turtle): 102455113
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Entry
102455113 CDS
T02980
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102455113 (VPS50)
Membrane trafficking [BR:
pss04131
]
Protein recycling
Others
EARP complex
102455113 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102455113
NCBI-ProteinID:
XP_006114541
Ensembl:
ENSPSIG00000011338
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENIHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSSDSFDIVKYELEKLPPVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNVAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRMMEWHEKHDRDEGTASSSV
SDGSNVIGAEETNFDRGYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTITLFEQYCNGGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSRKRSDY
SLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSADTTGTLTA
VEERKEKVPSPHLSHLVVLTAGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTANELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDS
LLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgacccgccagggcctgaaaagtccgcaggagaacatt
catgacctcagccctgttgagaattttcggattcctagtaaggaggaactgagagaactc
cgggaacaaccaactgatcctcaggcacagcaagaaataattaacagcattgaagaagtg
tatttttccagtgattcctttgatattgtgaagtatgagttggagaagcttcctccagta
cttagccttcaagaaatggaagaatatagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggagcttgaa
cgagttacatctttacaaactggccttcagttagctgcagtcatttgcacaaacggaaga
aggcacctgaatgttgcaaaggaaggttttactcaagctagtttgggacttcttgcaaac
caaagaaaacgacagttgctgattggactgctaaagtctctgagaacaataaaaacactg
caaagaacagatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttagaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactacaagacactttggaacaaatagaggaacaattagatgttgct
ctctccaaaatatgcaagaattttgatatcaatcattataccaaagttcagcaagcttac
agacttcttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaatacagtgtttcaagtggttcttgggtacgtagagttgtgtgcaggaaactcg
gacaccaaatttcagaagctacagtacaaagacctctgcactcatattacatcagacagc
tatataccatgtcttgctgacctctgcaaagcactttgggaagtcatgcttagttactat
cgaatgatggaatggcatgaaaaacatgacagagatgagggaactgcttcatcttctgtt
tcagatggcagcaatgtgattggagccgaggagaccaattttgaccgtggctatgtacaa
aagaaattagaacatggactttctcgaatatggcaggatgtgcagctgaaagtgaaaaca
tatctgctcggaacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggaagtaagtcagaagttttg
caagaatctattagaaaacaaagtgttaactatttcaagaattatcacagaactcgcctt
gaagaattgcgaatgttcttggagaatgagacctgggagctttgtcctgttaagtcaagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatctcaacaaccataactttgtttgaacaatat
tgtaatggaggaaatccatttgaaattcaggtcaacagcaaagatgatgagactgaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gatagtgacagtgatgttcctgaggagctaaaaagagattatgtggatgagcagacagga
gatgctcctgtaaaaagcatttctcgagaaaccctgaggagcaggaagcgatcagattat
agtctcaacaaagtgaatgcacccatcctaacaaacactacactgaatgtaataagactt
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtatatacgttttttggccggaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacagtgctagg
cagtttgaatcaacaggactgggtcttagtagtagcagactgcgcactacgttgaacagg
atacaggagagcctgattgatttggaggtctctgctgataccactggtaccctcacagct
gtcgaagaaagaaaagagaaagtgccaagcccacatctcagtcatctggtagttttaaca
gctggcaatactttgtatggtttggcagagagagtggtagccacggaatctttggtattt
ttggctgagcagtttgagttccttcagtcgcatcttgatgctgtgatgcctgccgccaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccaatgaactacgaaaa
ccaatatactggattgtagctgctaaagctattgattatgaacagatgctactcctcatg
gctaatgtgaaatgggatgtgaaggagatcatgtcacaacacaatatatatgttgattct
cttttaaaggaatttgaacagtttaacagaaggttgaatgaggtgtctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatacgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcag
ttggacttccaacagtttttaatgaagctagaaaagctaacggacattaggcccattccg
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgatatggag
cgctggatcaaggagcatagggaatattccaccaagcagttgatcaatctggtgaatgtt
tgtctgggatcccatatcaacaaaaaagcaagacagaaactgctagcagcaattgatgac
atagacagacctaaaagataa
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