Pelodiscus sinensis (Chinese soft-shelled turtle): 102455274
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Entry
102455274 CDS
T02980
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 isoform X1
KO
K13174
THO complex subunit 5
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102455274 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
102455274 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102455274 (THOC5)
03041 Spliceosome [BR:
pss03041
]
102455274 (THOC5)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102455274 (THOC5)
Spliceosome [BR:
pss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102455274 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
102455274
NCBI-ProteinID:
XP_075754025
LinkDB
All DBs
Position
15:5326520..5370018
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AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGAPQESKRGRVDPDQDVKYYSEEAEVELRDPSKDYELYKQTCQ
ELQRLMAEIQDLKSKGSKDSAAAIEERRIQSCMYFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVDEFYKEAPPEISKPNITL
NEPHQQTLARLDWELEQRKRLAEKYKECLASKEKILKEIEVKREYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQSETARHLPPPLYVLFVQANAYGQACDQKLAVAIDGSVEDAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDDSEL
HLVFYYLLNLNVLTVKSRVSTAAELSSPVSAGDLLSPGCLLSCLYPGDHGKRTPNPANQF
QFDKVGILSLSDYVADLGHPYVWVQKLGGLHFPKDQPQHTVTAESSLSASHMELTMKLLR
TRLQSRLALHKQFASLEHGVVPVSSECQQLFPSKVVARLAKWAALPYEDYLELHYTKDVV
EAGLAEDTHLYYTVLVERGTAKLQAAVALNPGYSSMPPVFSLCLSWKGERTGSNDDNIRA
MESEVNVRYRELCGPRPGYQLLTNQLQRLCVVLDVYLETECHDTSVEGPKEFPQEKMCLR
LARGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgattcgagcaagaagaggaaacccaaggtcatccgcactgacggggccccc
caggagagcaagcggggcagggtggaccctgatcaggatgtgaagtattacagtgaggag
gcggaggtggaactccgagatcccagcaaagactatgaactgtacaagcaaacctgccag
gagcttcagaggctcatggcagaaatccaggatctgaagagcaaaggcagcaaagacagc
gcagctgccatcgaagagcggcggatccagagctgcatgtacttcatgaccctgaagaaa
ctcaaccgtctggctcatattcggctgaagaaggggcgagatcagacccatgaggcaaag
cagaaggtagacgcctatcacctgcagctccagaacctactctacgaggtgatgcatctg
cagaaggagatcaccaaatgcctggagtttaagtcaaagcacgaggagattgagctcgtg
agcgtggatgagttttacaaagaggctcctccagaaatcagcaagcccaacatcaccctc
aacgagccccaccagcagaccctggcccgccttgactgggagctggagcagcgcaaaagg
ctggcggagaagtacaaggagtgtctggccagcaaggagaagatcctgaaggagatagaa
gtgaagagggaatatctgagcagcctccaaccccggctcaacagcatcatgcaggcctcc
ctccccgtgcaggagtatctcttcatgcctttcgaccaggctcacaagcagtccgagaca
gccaggcacctgcccccgccgctctacgtgctctttgtgcaagccaatgcctacggccaa
gcctgtgatcagaagctggccgtggccatcgacgggagtgtggaagacgccaaagccctc
tacaagccgccggaggactcccaagatgacgagagtgactcggatgcggaagaggagcag
accacgaagcgccgccgccccacgctgggggtgcagctggacgacaagcgcaaggagatg
ctgaagagacacccgctgtctgttaccatcgacctcaagtgcaaagacgacagcgagctg
cacctggtcttctactacctgctgaacctcaacgtgctgaccgtgaagagcagggtgagc
acggctgcggagctgagctcgcccgtcagcgcgggagacctgctgtcgccgggctgcctg
ctcagctgcctgtacccaggggaccacgggaagagaacgcccaaccccgccaaccagttc
cagttcgacaaagttggcatcctgagcctgagtgactacgtggcagacctgggccacccc
tacgtgtgggtgcagaagctgggcggcctgcatttccccaaagaccagcctcagcacacg
gtgacggccgagagctcgctgagcgccagccacatggagctgaccatgaagctgctgagg
acgaggctgcagtcccgcctggcgctccacaagcagtttgcgtccctggagcacggcgtg
gtgccggtctccagcgagtgccagcagctcttcccttccaaggtggtggcgcgcttggcg
aagtgggctgcgctcccctacgaggattacctggagctgcactacaccaaggacgtggtg
gaggccggcttggcggaagacactcacctctattacacggtgctggtggagagagggaca
gccaagctgcaggcagccgtggcgctgaatccgggctactcctccatgccgcccgtcttc
agcctgtgtctgagctggaagggggagaggaccgggagcaacgacgacaacattcgggcg
atggagagcgaggtcaacgtgcgctacagggagctgtgcgggccgcggcctggctaccag
ctgctcaccaaccagctgcagcgcctgtgcgtggtgctggacgtctacctggagaccgag
tgccacgacaccagcgtggaggggcccaaggagttcccgcaggagaagatgtgcctgcgt
ctcgccagggggcccagccggatgaagccgttcaagtacaaccatccccaggggttcttc
agccaccgctga
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